RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 PTPN23Q9H3S7 1636 aa36.62■■■■□ 3.45
CHKA-202ENST00000356135 PREX2Q70Z35 1606 aa36.62■■■■□ 3.45
CHKA-202ENST00000356135 DIP2BQ9P265 1576 aa36.62■■■■□ 3.45
CHKA-202ENST00000356135 CD109Q6YHK3 1445 aa36.59■■■■□ 3.45
CHKA-202ENST00000356135 ARHGAP5Q13017 1502 aa36.59■■■■□ 3.45
CHKA-202ENST00000356135 ITGAEP38570 1179 aa36.57■■■■□ 3.44
CHKA-202ENST00000356135 GLI2P10070 1586 aa36.56■■■■□ 3.44
CHKA-202ENST00000356135 TCOF1Q13428 1488 aaKnown RBP36.55■■■■□ 3.44
CHKA-202ENST00000356135 EFCAB2Q5VUJ9 269 aa36.52■■■■□ 3.44
CHKA-202ENST00000356135 CAMSAP2Q08AD1 1489 aa36.52■■■■□ 3.44
CHKA-202ENST00000356135 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.49■■■■□ 3.43
CHKA-202ENST00000356135 MAP3K4Q9Y6R4 1608 aa36.49■■■■□ 3.43
CHKA-202ENST00000356135 SAMD9LQ8IVG5 1584 aa36.47■■■■□ 3.43
CHKA-202ENST00000356135 KIF13AQ9H1H9 1805 aa36.47■■■■□ 3.43
CHKA-202ENST00000356135 ARAP3Q8WWN8 1544 aa36.45■■■■□ 3.43
CHKA-202ENST00000356135 FANCAO15360 1455 aa36.45■■■■□ 3.43
CHKA-202ENST00000356135 HNRNPMP52272 730 aaKnown RBP eCLIP36.45■■■■□ 3.431e-6■■■□□ 16.5
CHKA-202ENST00000356135 TRHP20396 242 aaPredicted RBP36.4■■■■□ 3.42
CHKA-202ENST00000356135 PTPRKQ15262 1439 aa36.37■■■■□ 3.41
CHKA-202ENST00000356135 TSPOAP1O95153 1857 aa36.37■■■■□ 3.41
CHKA-202ENST00000356135 ARHGEF12Q9NZN5 1544 aa36.35■■■■□ 3.41
CHKA-202ENST00000356135 SYCP2Q9BX26 1530 aa36.34■■■■□ 3.41
CHKA-202ENST00000356135 AKNAQ7Z591 1439 aa36.34■■■■□ 3.41
CHKA-202ENST00000356135 MBD5Q9P267 1494 aa36.34■■■■□ 3.41
CHKA-202ENST00000356135 ABCC5O15440 1437 aa36.33■■■■□ 3.41
CHKA-202ENST00000356135 DAPK1P53355 1430 aa36.31■■■■□ 3.4
CHKA-202ENST00000356135 CHIC2Q9UKJ5 165 aa36.31■■■■□ 3.4
CHKA-202ENST00000356135 ABCC1P33527 1531 aa36.3■■■■□ 3.4
CHKA-202ENST00000356135 PPRC1Q5VV67 1664 aaKnown RBP36.3■■■■□ 3.4
CHKA-202ENST00000356135 KIAA1107Q9UPP5 1409 aa36.3■■■■□ 3.4
CHKA-202ENST00000356135 PLEKHH2Q8IVE3 1493 aa36.29■■■■□ 3.4
CHKA-202ENST00000356135 DNMT1P26358 1616 aaKnown RBP36.29■■■■□ 3.4
CHKA-202ENST00000356135 ADGRL1O94910 1474 aa36.28■■■■□ 3.4
CHKA-202ENST00000356135 SCAPERQ9BY12 1400 aa36.27■■■■□ 3.4
CHKA-202ENST00000356135 NEO1Q92859 1461 aa36.25■■■■□ 3.39
CHKA-202ENST00000356135 TRAPPC8Q9Y2L5 1435 aa36.24■■■■□ 3.39
CHKA-202ENST00000356135 CFAP74Q9C0B2 1584 aa36.23■■■■□ 3.39
CHKA-202ENST00000356135 AFAP1Q8N556 730 aa36.22■■■■□ 3.39
CHKA-202ENST00000356135 ARHGEF5Q12774 1597 aa36.22■■■■□ 3.39
CHKA-202ENST00000356135 RSPH4AQ5TD94 716 aa36.2■■■■□ 3.39
CHKA-202ENST00000356135 CCDC141Q6ZP82 1450 aa36.2■■■■□ 3.39
CHKA-202ENST00000356135 TEX14Q8IWB6 1497 aa36.19■■■■□ 3.38
CHKA-202ENST00000356135 TSPY4P0CV99 314 aa36.18■■■■□ 3.38
CHKA-202ENST00000356135 TSPY10P0CW01 314 aa36.18■■■■□ 3.38
CHKA-202ENST00000356135 RRP7BPQ9NSQ0 103 aa36.15■■■■□ 3.38
CHKA-202ENST00000356135 CROCC2H7BZ55 1655 aa36.14■■■■□ 3.38
CHKA-202ENST00000356135 RAPGEF3O95398 923 aa36.12■■■■□ 3.37
CHKA-202ENST00000356135 C9orf84Q5VXU9 1444 aa36.12■■■■□ 3.37
CHKA-202ENST00000356135 DENND4BO75064 1496 aaPredicted RBP36.08■■■■□ 3.37
CHKA-202ENST00000356135 SHANK2Q9UPX8 1470 aa36.07■■■■□ 3.36
CHKA-202ENST00000356135 POGZQ7Z3K3 1410 aa36.06■■■■□ 3.36
CHKA-202ENST00000356135 SPAG9O60271 1321 aaKnown RBP36.05■■■■□ 3.36
CHKA-202ENST00000356135 NCOA1Q15788 1441 aa36.03■■■■□ 3.36
CHKA-202ENST00000356135 ROCK1Q13464 1354 aa36.03■■■■□ 3.36
CHKA-202ENST00000356135 ZNF518AQ6AHZ1 1483 aa36.03■■■■□ 3.36
CHKA-202ENST00000356135 COL17A1Q9UMD9 1497 aaPredicted RBP36.01■■■■□ 3.35
CHKA-202ENST00000356135 MYT1LQ9UL68 1186 aa36■■■■□ 3.35
CHKA-202ENST00000356135 ANKRD30AQ9BXX3 1397 aa36■■■■□ 3.35
CHKA-202ENST00000356135 ADGRL2O95490 1459 aa36■■■■□ 3.35
CHKA-202ENST00000356135 NAIPQ13075 1403 aa36■■■■□ 3.35
CHKA-202ENST00000356135 MAST1Q9Y2H9 1570 aa35.99■■■■□ 3.35
CHKA-202ENST00000356135 HFM1A2PYH4 1435 aa35.99■■■■□ 3.35
CHKA-202ENST00000356135 SETD5Q9C0A6 1442 aa35.98■■■■□ 3.35
CHKA-202ENST00000356135 ADGBQ8N7X0 1667 aa35.98■■■■□ 3.35
CHKA-202ENST00000356135 RICTORQ6R327 1708 aa35.95■■■■□ 3.35
CHKA-202ENST00000356135 KDM5CP41229 1560 aa35.94■■■■□ 3.34
CHKA-202ENST00000356135 FRMPD1Q5SYB0 1578 aa35.94■■■■□ 3.34
CHKA-202ENST00000356135 RAB3GAP2Q9H2M9 1393 aa35.93■■■■□ 3.34
CHKA-202ENST00000356135 ZFYVE16Q7Z3T8 1539 aa35.93■■■■□ 3.34
CHKA-202ENST00000356135 RTEL1-TNFRSF6BF6WH68 1400 aa35.92■■■■□ 3.34
CHKA-202ENST00000356135 KIF15Q9NS87 1388 aa35.91■■■■□ 3.34
CHKA-202ENST00000356135 ATP7AQ04656 1500 aa35.9■■■■□ 3.34
CHKA-202ENST00000356135 INO80Q9ULG1 1556 aaPredicted RBP35.9■■■■□ 3.34
CHKA-202ENST00000356135 KDM6BO15054 1643 aa35.87■■■■□ 3.33
CHKA-202ENST00000356135 KIDINS220Q9ULH0 1771 aa35.87■■■■□ 3.33
CHKA-202ENST00000356135 MLH3Q9UHC1 1453 aa35.86■■■■□ 3.33
CHKA-202ENST00000356135 GCC2Q8IWJ2 1684 aa35.86■■■■□ 3.33
CHKA-202ENST00000356135 PLXNC1O60486 1568 aa35.84■■■■□ 3.33
CHKA-202ENST00000356135 HECW2Q9P2P5 1572 aa35.84■■■■□ 3.33
CHKA-202ENST00000356135 ANKRD50Q9ULJ7 1429 aa35.8■■■■□ 3.32
CHKA-202ENST00000356135 YEATS2Q9ULM3 1422 aa35.78■■■■□ 3.32
CHKA-202ENST00000356135 ZMYM4Q5VZL5 1548 aa35.77■■■■□ 3.32
CHKA-202ENST00000356135 DUOX2Q9NRD8 1548 aa35.75■■■■□ 3.31
CHKA-202ENST00000356135 ABCA6Q8N139 1617 aa35.73■■■■□ 3.31
CHKA-202ENST00000356135 HRCP23327 699 aa35.73■■■■□ 3.31
CHKA-202ENST00000356135 DHX29Q7Z478 1369 aaKnown RBP35.69■■■■□ 3.3
CHKA-202ENST00000356135 DIP2CQ9Y2E4 1556 aa35.69■■■■□ 3.3
CHKA-202ENST00000356135 MAGI2Q86UL8 1455 aa35.68■■■■□ 3.3
CHKA-202ENST00000356135 TRIM52Q96A61 297 aa35.67■■■■□ 3.3
CHKA-202ENST00000356135 A2MP01023 1474 aa35.67■■■■□ 3.3
CHKA-202ENST00000356135 ERBINQ96RT1 1412 aa35.64■■■■□ 3.3
CHKA-202ENST00000356135 KIF3BO15066 747 aa35.59■■■■□ 3.29
CHKA-202ENST00000356135 ATP10AO60312 1499 aa35.58■■■■□ 3.29
CHKA-202ENST00000356135 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.57■■■■□ 3.285e-7■■■□□ 14.7
CHKA-202ENST00000356135 DHX57Q6P158 1386 aaKnown RBP35.55■■■■□ 3.28
CHKA-202ENST00000356135 CCER1Q8TC90 406 aaPredicted RBP35.55■■■■□ 3.28
CHKA-202ENST00000356135 ARHGEF40Q8TER5 1519 aa35.53■■■■□ 3.28
CHKA-202ENST00000356135 NUP155O75694 1391 aa35.52■■■■□ 3.28
CHKA-202ENST00000356135 EIF2AK4Q9P2K8 1649 aaKnown RBP35.47■■■■□ 3.27
CHKA-202ENST00000356135 MPHOSPH9Q99550 1183 aa35.47■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms