RNA–Protein interactions for RNA: ENST00000355272.10

AP3D1-202, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AP3D1, Length 5,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-202ENST00000355272 L3MBTL2Q969R5 705 aa21.74■■□□□ 1.07
AP3D1-202ENST00000355272 BECN1Q14457 450 aa21.73■■□□□ 1.07
AP3D1-202ENST00000355272 KANK1Q14678 1352 aa21.73■■□□□ 1.07
AP3D1-202ENST00000355272 DEKP35659 375 aaKnown RBP21.7■■□□□ 1.07
AP3D1-202ENST00000355272 EFCAB2Q5VUJ9 269 aa21.7■■□□□ 1.07
AP3D1-202ENST00000355272 JPH4Q96JJ6 628 aa21.7■■□□□ 1.06
AP3D1-202ENST00000355272 KIF3BO15066 747 aa21.69■■□□□ 1.06
AP3D1-202ENST00000355272 MORC1Q86VD1 984 aa21.68■■□□□ 1.06
AP3D1-202ENST00000355272 NUTM2DQ5VT03 806 aaPredicted RBP21.68■■□□□ 1.06
AP3D1-202ENST00000355272 CCER2I3L3R5 266 aa21.67■■□□□ 1.06
AP3D1-202ENST00000355272 TPRNQ4KMQ1 711 aa21.64■■□□□ 1.05
AP3D1-202ENST00000355272 TRIM44Q96DX7 344 aaPredicted RBP21.64■■□□□ 1.05
AP3D1-202ENST00000355272 ROCK2O75116 1388 aaKnown RBP21.62■■□□□ 1.05
AP3D1-202ENST00000355272 ANKRD30AQ9BXX3 1397 aa21.62■■□□□ 1.05
AP3D1-202ENST00000355272 SMARCA4P51532 1647 aa21.6■■□□□ 1.05
AP3D1-202ENST00000355272 ERICH6BQ5W0A0 696 aa21.56■■□□□ 1.04
AP3D1-202ENST00000355272 NCLP19338 710 aaKnown RBP21.54■■□□□ 1.04
AP3D1-202ENST00000355272 FANCD2Q9BXW9 1451 aa21.54■■□□□ 1.04
AP3D1-202ENST00000355272 KTN1Q86UP2 1357 aaKnown RBP21.54■■□□□ 1.04
AP3D1-202ENST00000355272 U2AF1L5P0DN76 240 aaPredicted RBP21.53■■□□□ 1.04
AP3D1-202ENST00000355272 U2AF1Q01081 240 aaKnown RBP eCLIP21.53■■□□□ 1.04
AP3D1-202ENST00000355272 SPAG9O60271 1321 aaKnown RBP21.52■■□□□ 1.04
AP3D1-202ENST00000355272 DHX57Q6P158 1386 aaKnown RBP21.5■■□□□ 1.03
AP3D1-202ENST00000355272 TAOK2Q9UL54 1235 aa21.5■■□□□ 1.03
AP3D1-202ENST00000355272 NUTM2FA1L443 756 aa21.48■■□□□ 1.03
AP3D1-202ENST00000355272 GOLGA6L22H0YM25 854 aa21.48■■□□□ 1.03
AP3D1-202ENST00000355272 NAP1L5Q96NT1 182 aaPredicted RBP21.48■■□□□ 1.03
AP3D1-202ENST00000355272 ST20-MTHFSA0A0A6YYL1 179 aa21.47■■□□□ 1.03
AP3D1-202ENST00000355272 PAK3O75914 559 aaPredicted RBP21.47■■□□□ 1.03
AP3D1-202ENST00000355272 HDGFP51858 240 aaKnown RBP21.47■■□□□ 1.03
AP3D1-202ENST00000355272 WASHC2CQ9Y4E1 1318 aa21.46■■□□□ 1.03
AP3D1-202ENST00000355272 APBB1O00213 710 aa21.46■■□□□ 1.03
AP3D1-202ENST00000355272 IGF1RP08069 1367 aa21.45■■□□□ 1.02
AP3D1-202ENST00000355272 TRAK1Q9UPV9 953 aa21.45■■□□□ 1.02
AP3D1-202ENST00000355272 OS9Q13438 667 aaPredicted RBP21.44■■□□□ 1.02
AP3D1-202ENST00000355272 HDGFL2Q7Z4V5 671 aaPredicted RBP21.44■■□□□ 1.02
AP3D1-202ENST00000355272 CCDC146Q8IYE0 955 aa21.44■■□□□ 1.02
AP3D1-202ENST00000355272 CCDC18Q5T9S5 1454 aa21.44■■□□□ 1.02
AP3D1-202ENST00000355272 RAD54L2Q9Y4B4 1467 aa21.44■■□□□ 1.02
AP3D1-202ENST00000355272 RCAN3Q9UKA8 241 aa21.44■■□□□ 1.02
AP3D1-202ENST00000355272 ZNF644Q9H582 1327 aaPredicted RBP21.42■■□□□ 1.02
AP3D1-202ENST00000355272 CASC1Q6TDU7 716 aa21.41■■□□□ 1.02
AP3D1-202ENST00000355272 PNNQ9H307 717 aaKnown RBP21.41■■□□□ 1.02
AP3D1-202ENST00000355272 RALBP1Q15311 655 aa21.4■■□□□ 1.02
AP3D1-202ENST00000355272 SPRYD3Q8NCJ5 442 aa21.39■■□□□ 1.02
AP3D1-202ENST00000355272 CYB5RLQ6IPT4 315 aa21.37■■□□□ 1.01
AP3D1-202ENST00000355272 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
AP3D1-202ENST00000355272 CLUAP1Q96AJ1 413 aa21.37■■□□□ 1.01
AP3D1-202ENST00000355272 MS4A1P11836 297 aa21.37■■□□□ 1.01
AP3D1-202ENST00000355272 PTMAP06454 111 aaKnown RBP21.36■■□□□ 1.01
AP3D1-202ENST00000355272 PTPRGP23470 1445 aa21.36■■□□□ 1.01
AP3D1-202ENST00000355272 RTF1Q92541 710 aaKnown RBP21.36■■□□□ 1.01
AP3D1-202ENST00000355272 RSPH4AQ5TD94 716 aa21.35■■□□□ 1.01
AP3D1-202ENST00000355272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.34■■□□□ 1.01
AP3D1-202ENST00000355272 NLRP13Q86W25 1043 aa21.33■■□□□ 1.01
AP3D1-202ENST00000355272 DNTTIP2Q5QJE6 756 aaKnown RBP21.32■■□□□ 1
AP3D1-202ENST00000355272 PANK3Q9H999 370 aa21.32■■□□□ 1
AP3D1-202ENST00000355272 NPHP1O15259 732 aa21.32■■□□□ 1
AP3D1-202ENST00000355272 RRP7AQ9Y3A4 280 aaKnown RBP21.32■■□□□ 1
AP3D1-202ENST00000355272 KCNJ4P48050 445 aa21.31■■□□□ 1
AP3D1-202ENST00000355272 HSP90AB1P08238 724 aaKnown RBP21.3■■□□□ 1
AP3D1-202ENST00000355272 ITPRIPQ8IWB1 547 aa21.3■■□□□ 1
AP3D1-202ENST00000355272 CHMP4BQ9H444 224 aaKnown RBP21.3■■□□□ 1
AP3D1-202ENST00000355272 GAPVD1Q14C86 1478 aa21.29■■□□□ 1
AP3D1-202ENST00000355272 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.29■■□□□ 1
AP3D1-202ENST00000355272 CCDC144AA2RUR9 1427 aa21.28■■□□□ 1
AP3D1-202ENST00000355272 FGD1P98174 961 aa21.27■■□□□ 1
AP3D1-202ENST00000355272 AQRO60306 1485 aaKnown RBP eCLIP21.27■■□□□ 18e-7■■■■■ 29.8
AP3D1-202ENST00000355272 IPO9Q96P70 1041 aaKnown RBP21.27■■□□□ 1
AP3D1-202ENST00000355272 NAP1L2Q9ULW6 460 aaPredicted RBP21.27■■□□□ 1
AP3D1-202ENST00000355272 ZNF330Q9Y3S2 320 aaPredicted RBP21.27■■□□□ 1
AP3D1-202ENST00000355272 GOLGA2Q08379 1002 aa21.26■□□□□ 0.99
AP3D1-202ENST00000355272 LTV1Q96GA3 475 aaPredicted RBP21.25■□□□□ 0.99
AP3D1-202ENST00000355272 TERF2IPQ9NYB0 399 aa21.25■□□□□ 0.99
AP3D1-202ENST00000355272 PRKRIP1Q9H875 184 aaPredicted RBP21.25■□□□□ 0.99
AP3D1-202ENST00000355272 PHLDB1Q86UU1 1377 aa21.25■□□□□ 0.99
AP3D1-202ENST00000355272 SLKQ9H2G2 1235 aaPredicted RBP21.24■□□□□ 0.99
AP3D1-202ENST00000355272 CSB-PGBD3P0DP91 1061 aa21.24■□□□□ 0.99
AP3D1-202ENST00000355272 TCERG1O14776 1098 aaKnown RBP21.24■□□□□ 0.99
AP3D1-202ENST00000355272 PLCB2Q00722 1185 aa21.24■□□□□ 0.99
AP3D1-202ENST00000355272 NGDNQ8NEJ9 315 aaKnown RBP21.23■□□□□ 0.99
AP3D1-202ENST00000355272 SMC4Q9NTJ3 1288 aa21.23■□□□□ 0.99
AP3D1-202ENST00000355272 EIF3AQ14152 1382 aaKnown RBP21.23■□□□□ 0.99
AP3D1-202ENST00000355272 IPO8O15397 1037 aaKnown RBP21.22■□□□□ 0.99
AP3D1-202ENST00000355272 BCL2L13Q9BXK5 485 aa21.22■□□□□ 0.99
AP3D1-202ENST00000355272 PLIN1O60240 522 aa21.2■□□□□ 0.99
AP3D1-202ENST00000355272 ELL2O00472 640 aaPredicted RBP21.2■□□□□ 0.98
AP3D1-202ENST00000355272 GZF1Q9H116 711 aaPredicted RBP21.2■□□□□ 0.98
AP3D1-202ENST00000355272 USP47Q96K76 1375 aa21.2■□□□□ 0.98
AP3D1-202ENST00000355272 HSCBQ8IWL3 235 aa21.19■□□□□ 0.98
AP3D1-202ENST00000355272 EID1Q9Y6B2 187 aa21.17■□□□□ 0.98
AP3D1-202ENST00000355272 MINK1Q8N4C8 1332 aaPredicted RBP21.17■□□□□ 0.98
AP3D1-202ENST00000355272 ZRSR1Q15695 479 aaKnown RBP21.17■□□□□ 0.98
AP3D1-202ENST00000355272 L1TD1Q5T7N2 865 aaKnown RBP21.16■□□□□ 0.98
AP3D1-202ENST00000355272 SLC4A10Q6U841 1118 aa21.16■□□□□ 0.98
AP3D1-202ENST00000355272 TULP1O00294 542 aaPredicted RBP21.15■□□□□ 0.98
AP3D1-202ENST00000355272 MYBBP1AQ9BQG0 1328 aaKnown RBP21.14■□□□□ 0.98
AP3D1-202ENST00000355272 OSCARQ8IYS5 282 aa21.14■□□□□ 0.97
AP3D1-202ENST00000355272 FGD6Q6ZV73 1430 aa21.14■□□□□ 0.97
AP3D1-202ENST00000355272 RWDD1Q9H446 243 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms