RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 CUX1P39880 1505 aa18.66■□□□□ 0.58
SPPL3-201ENST00000353487 ARAP1Q96P48 1450 aa18.66■□□□□ 0.58
SPPL3-201ENST00000353487 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
SPPL3-201ENST00000353487 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.65■□□□□ 0.58
SPPL3-201ENST00000353487 CC2D1BQ5T0F9 858 aaKnown RBP18.65■□□□□ 0.58
SPPL3-201ENST00000353487 CARD11Q9BXL7 1154 aa18.65■□□□□ 0.58
SPPL3-201ENST00000353487 RGL3Q3MIN7 710 aa18.63■□□□□ 0.57
SPPL3-201ENST00000353487 PEG3Q9GZU2 1588 aa18.63■□□□□ 0.57
SPPL3-201ENST00000353487 L1TD1Q5T7N2 865 aaKnown RBP18.63■□□□□ 0.57
SPPL3-201ENST00000353487 WASHC2AQ641Q2 1341 aa18.62■□□□□ 0.57
SPPL3-201ENST00000353487 RAD54L2Q9Y4B4 1467 aa18.6■□□□□ 0.57
SPPL3-201ENST00000353487 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
SPPL3-201ENST00000353487 TOP2BQ02880 1626 aa18.6■□□□□ 0.57
SPPL3-201ENST00000353487 USP35Q9P2H5 1018 aa18.6■□□□□ 0.57
SPPL3-201ENST00000353487 PLEKHG5O94827 1062 aa18.59■□□□□ 0.57
SPPL3-201ENST00000353487 FHOD3Q2V2M9 1422 aa18.59■□□□□ 0.57
SPPL3-201ENST00000353487 PRXQ9BXM0 1461 aa18.58■□□□□ 0.57
SPPL3-201ENST00000353487 CFTRP13569 1480 aa18.58■□□□□ 0.56
SPPL3-201ENST00000353487 AKNAQ7Z591 1439 aa18.58■□□□□ 0.56
SPPL3-201ENST00000353487 MSNP26038 577 aaKnown RBP18.57■□□□□ 0.56
SPPL3-201ENST00000353487 FGD5Q6ZNL6 1462 aa18.57■□□□□ 0.56
SPPL3-201ENST00000353487 PLCB2Q00722 1185 aa18.57■□□□□ 0.56
SPPL3-201ENST00000353487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.56
SPPL3-201ENST00000353487 NESP48681 1621 aa18.56■□□□□ 0.56
SPPL3-201ENST00000353487 ZMYND15Q9H091 742 aa18.55■□□□□ 0.56
SPPL3-201ENST00000353487 MPHOSPH9Q99550 1183 aa18.55■□□□□ 0.56
SPPL3-201ENST00000353487 NFKBIBQ15653 356 aa18.55■□□□□ 0.56
SPPL3-201ENST00000353487 FRAT1Q92837 279 aaPredicted RBP18.55■□□□□ 0.56
SPPL3-201ENST00000353487 SKAP1Q86WV1 359 aa18.54■□□□□ 0.56
SPPL3-201ENST00000353487 NEUROD2Q15784 382 aa18.53■□□□□ 0.56
SPPL3-201ENST00000353487 FANCD2Q9BXW9 1451 aa18.53■□□□□ 0.56
SPPL3-201ENST00000353487 SLC24A1O60721 1099 aa18.52■□□□□ 0.56
SPPL3-201ENST00000353487 ARHGAP35Q9NRY4 1499 aa18.52■□□□□ 0.56
SPPL3-201ENST00000353487 FHAD1B1AJZ9 1412 aa18.52■□□□□ 0.56
SPPL3-201ENST00000353487 FAM13BQ9NYF5 915 aa18.52■□□□□ 0.55
SPPL3-201ENST00000353487 RRP1P56182 461 aaKnown RBP18.51■□□□□ 0.55
SPPL3-201ENST00000353487 PHLDB1Q86UU1 1377 aa18.51■□□□□ 0.55
SPPL3-201ENST00000353487 GOLGA6L3A6NEY3 463 aa18.48■□□□□ 0.55
SPPL3-201ENST00000353487 CRBNQ96SW2 442 aa18.47■□□□□ 0.55
SPPL3-201ENST00000353487 GOLGA6L22H0YM25 854 aa18.46■□□□□ 0.55
SPPL3-201ENST00000353487 MYH16Q9H6N6 1097 aa18.46■□□□□ 0.55
SPPL3-201ENST00000353487 MAPK8IP2Q13387 824 aaPredicted RBP18.45■□□□□ 0.54
SPPL3-201ENST00000353487 FRAT2O75474 233 aaPredicted RBP18.45■□□□□ 0.54
SPPL3-201ENST00000353487 DCAF11Q8TEB1 546 aa18.44■□□□□ 0.54
SPPL3-201ENST00000353487 RRBP1Q9P2E9 1410 aaKnown RBP18.44■□□□□ 0.54
SPPL3-201ENST00000353487 HMGXB3Q12766 1538 aa18.43■□□□□ 0.54
SPPL3-201ENST00000353487 KIF7Q2M1P5 1343 aa18.42■□□□□ 0.54
SPPL3-201ENST00000353487 CCDC7Q96M83 1385 aa18.39■□□□□ 0.54
SPPL3-201ENST00000353487 CHMP7Q8WUX9 453 aaPredicted RBP18.39■□□□□ 0.53
SPPL3-201ENST00000353487 CDCA7LQ96GN5 454 aa18.39■□□□□ 0.53
SPPL3-201ENST00000353487 CC2D2AQ9P2K1 1620 aa18.39■□□□□ 0.53
SPPL3-201ENST00000353487 ERICH3Q5RHP9 1530 aa18.39■□□□□ 0.53
SPPL3-201ENST00000353487 FMN1Q68DA7 1419 aa18.38■□□□□ 0.53
SPPL3-201ENST00000353487 C11orf95C9JLR9 678 aaPredicted RBP18.38■□□□□ 0.53
SPPL3-201ENST00000353487 CCDC18Q5T9S5 1454 aa18.37■□□□□ 0.53
SPPL3-201ENST00000353487 TNNT3P45378 269 aaPredicted RBP18.37■□□□□ 0.53
SPPL3-201ENST00000353487 BACH2Q9BYV9 841 aa18.37■□□□□ 0.53
SPPL3-201ENST00000353487 RBM10P98175 930 aaKnown RBP18.37■□□□□ 0.53
SPPL3-201ENST00000353487 KNSTRNQ9Y448 316 aa18.36■□□□□ 0.53
SPPL3-201ENST00000353487 CNTLNQ9NXG0 1405 aa18.36■□□□□ 0.53
SPPL3-201ENST00000353487 PKD2Q13563 968 aa18.36■□□□□ 0.53
SPPL3-201ENST00000353487 TSPY4P0CV99 314 aa18.35■□□□□ 0.53
SPPL3-201ENST00000353487 TSPY10P0CW01 314 aa18.35■□□□□ 0.53
SPPL3-201ENST00000353487 CFDP1Q9UEE9 299 aaPredicted RBP18.34■□□□□ 0.53
SPPL3-201ENST00000353487 MS4A1P11836 297 aa18.34■□□□□ 0.53
SPPL3-201ENST00000353487 FAM161AQ3B820 660 aa18.34■□□□□ 0.53
SPPL3-201ENST00000353487 ST20-MTHFSA0A0A6YYL1 179 aa18.33■□□□□ 0.52
SPPL3-201ENST00000353487 SENP3Q9H4L4 574 aaPredicted RBP18.31■□□□□ 0.52
SPPL3-201ENST00000353487 HSP90AB1P08238 724 aaKnown RBP18.3■□□□□ 0.52
SPPL3-201ENST00000353487 BIVM-ERCC5R4GMW8 1640 aa18.3■□□□□ 0.52
SPPL3-201ENST00000353487 NLRP13Q86W25 1043 aa18.29■□□□□ 0.52
SPPL3-201ENST00000353487 CCDC146Q8IYE0 955 aa18.29■□□□□ 0.52
SPPL3-201ENST00000353487 PDE4CQ08493 712 aa18.29■□□□□ 0.52
SPPL3-201ENST00000353487 KTN1Q86UP2 1357 aaKnown RBP18.28■□□□□ 0.52
SPPL3-201ENST00000353487 RALBP1Q15311 655 aa18.28■□□□□ 0.52
SPPL3-201ENST00000353487 NBPF8Q3BBV2 869 aa18.28■□□□□ 0.52
SPPL3-201ENST00000353487 POLA1P09884 1462 aaPredicted RBP18.27■□□□□ 0.52
SPPL3-201ENST00000353487 LRRC9Q6ZRR7 1453 aa18.27■□□□□ 0.52
SPPL3-201ENST00000353487 CLUAP1Q96AJ1 413 aa18.26■□□□□ 0.51
SPPL3-201ENST00000353487 FOXD4L1Q9NU39 408 aa18.26■□□□□ 0.51
SPPL3-201ENST00000353487 CHGAP10645 457 aaKnown RBP18.25■□□□□ 0.51
SPPL3-201ENST00000353487 MYBBP1AQ9BQG0 1328 aaKnown RBP18.24■□□□□ 0.51
SPPL3-201ENST00000353487 MFAP1P55081 439 aaKnown RBP18.24■□□□□ 0.51
SPPL3-201ENST00000353487 PDS5BQ9NTI5 1447 aa18.24■□□□□ 0.51
SPPL3-201ENST00000353487 PLEKHD1A6NEE1 506 aa18.24■□□□□ 0.51
SPPL3-201ENST00000353487 FTSJ3Q8IY81 847 aaKnown RBP18.24■□□□□ 0.51
SPPL3-201ENST00000353487 PDE3BQ13370 1112 aa18.23■□□□□ 0.51
SPPL3-201ENST00000353487 CENPQQ7L2Z9 268 aaPredicted RBP18.23■□□□□ 0.51
SPPL3-201ENST00000353487 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
SPPL3-201ENST00000353487 FAM43AQ8N2R8 423 aa18.23■□□□□ 0.51
SPPL3-201ENST00000353487 USP47Q96K76 1375 aa18.22■□□□□ 0.51
SPPL3-201ENST00000353487 AQRO60306 1485 aaKnown RBP eCLIP18.22■□□□□ 0.51
SPPL3-201ENST00000353487 HSCBQ8IWL3 235 aa18.21■□□□□ 0.51
SPPL3-201ENST00000353487 PNISRQ8TF01 805 aaKnown RBP18.21■□□□□ 0.51
SPPL3-201ENST00000353487 UACAQ9BZF9 1416 aa18.21■□□□□ 0.51
SPPL3-201ENST00000353487 POGKQ9P215 609 aa18.2■□□□□ 0.5
SPPL3-201ENST00000353487 GOLGA2Q08379 1002 aa18.2■□□□□ 0.5
SPPL3-201ENST00000353487 CHAF1AQ13111 956 aaPredicted RBP18.19■□□□□ 0.5
SPPL3-201ENST00000353487 GAPVD1Q14C86 1478 aa18.19■□□□□ 0.5
SPPL3-201ENST00000353487 ZNF771Q7L3S4 317 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms