RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 NISCHQ9Y2I1 1504 aa25.66■■□□□ 1.7
SPPL3-201ENST00000353487 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
SPPL3-201ENST00000353487 SHROOM4Q9ULL8 1493 aa23.66■■□□□ 1.38
SPPL3-201ENST00000353487 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
SPPL3-201ENST00000353487 PELP1Q8IZL8 1130 aaKnown RBP23.54■■□□□ 1.36
SPPL3-201ENST00000353487 PCGF6Q9BYE7 350 aa23.51■■□□□ 1.35
SPPL3-201ENST00000353487 HRCP23327 699 aa23.1■■□□□ 1.29
SPPL3-201ENST00000353487 PPARGC1BQ86YN6 1023 aaKnown RBP23.07■■□□□ 1.28
SPPL3-201ENST00000353487 MYT1Q01538 1121 aa23.04■■□□□ 1.28
SPPL3-201ENST00000353487 EHMT2Q96KQ7 1210 aa22.95■■□□□ 1.26
SPPL3-201ENST00000353487 FAM9AQ8IZU1 332 aaPredicted RBP22.47■■□□□ 1.19
SPPL3-201ENST00000353487 CENPBP07199 599 aaPredicted RBP22.44■■□□□ 1.18
SPPL3-201ENST00000353487 LOC105371045A0A1W2PR82 267 aa22.4■■□□□ 1.18
SPPL3-201ENST00000353487 CHIC1Q5VXU3 224 aa22.34■■□□□ 1.17
SPPL3-201ENST00000353487 YTHDC1Q96MU7 727 aaKnown RBP22.34■■□□□ 1.17
SPPL3-201ENST00000353487 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
SPPL3-201ENST00000353487 ZEB1P37275 1124 aaPredicted RBP22.23■■□□□ 1.15
SPPL3-201ENST00000353487 TRIM26Q12899 539 aaPredicted RBP22.21■■□□□ 1.15
SPPL3-201ENST00000353487 ERICH6Q7L0X2 663 aa22.09■■□□□ 1.13
SPPL3-201ENST00000353487 CCER1Q8TC90 406 aaPredicted RBP22.08■■□□□ 1.13
SPPL3-201ENST00000353487 TRIM41Q8WV44 630 aa21.86■■□□□ 1.09
SPPL3-201ENST00000353487 GTF3C3Q9Y5Q9 886 aa21.83■■□□□ 1.09
SPPL3-201ENST00000353487 SCAF1Q9H7N4 1312 aaKnown RBP21.83■■□□□ 1.09
SPPL3-201ENST00000353487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
SPPL3-201ENST00000353487 MYO15BQ96JP2 1530 aa21.61■■□□□ 1.05
SPPL3-201ENST00000353487 DIEXFQ68CQ4 756 aaKnown RBP21.6■■□□□ 1.05
SPPL3-201ENST00000353487 ACIN1Q9UKV3 1341 aaKnown RBP21.58■■□□□ 1.04
SPPL3-201ENST00000353487 ZCCHC6Q5VYS8 1495 aaKnown RBP21.51■■□□□ 1.03
SPPL3-201ENST00000353487 NEUROD1Q13562 356 aa21.5■■□□□ 1.03
SPPL3-201ENST00000353487 RANGAP1P46060 587 aaPredicted RBP21.38■■□□□ 1.01
SPPL3-201ENST00000353487 NEFLP07196 543 aa21.33■■□□□ 1
SPPL3-201ENST00000353487 APLP2Q06481 763 aa21.27■■□□□ 1
SPPL3-201ENST00000353487 BCANQ96GW7 911 aa21.23■□□□□ 0.99
SPPL3-201ENST00000353487 CCDC180Q9P1Z9 1646 aa21.23■□□□□ 0.99
SPPL3-201ENST00000353487 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
SPPL3-201ENST00000353487 UBTFP17480 764 aaKnown RBP21.19■□□□□ 0.98
SPPL3-201ENST00000353487 HNRNPUL2Q1KMD3 747 aaKnown RBP21.17■□□□□ 0.98
SPPL3-201ENST00000353487 ABCC9O60706 1549 aa21.1■□□□□ 0.97
SPPL3-201ENST00000353487 BCL11AQ9H165 835 aa21.04■□□□□ 0.96
SPPL3-201ENST00000353487 ZNF316A6NFI3 1004 aaPredicted RBP20.97■□□□□ 0.95
SPPL3-201ENST00000353487 EIF5BO60841 1220 aaKnown RBP20.92■□□□□ 0.94
SPPL3-201ENST00000353487 RTL5Q5HYW3 569 aaPredicted RBP20.83■□□□□ 0.93
SPPL3-201ENST00000353487 SCRIBQ14160 1630 aa20.83■□□□□ 0.92
SPPL3-201ENST00000353487 MIER1Q8N108 512 aa20.78■□□□□ 0.92
SPPL3-201ENST00000353487 ITGAEP38570 1179 aa20.77■□□□□ 0.92
SPPL3-201ENST00000353487 ANP32EQ9BTT0 268 aa20.63■□□□□ 0.89
SPPL3-201ENST00000353487 PABPN1Q86U42 306 aaKnown RBP eCLIP20.62■□□□□ 0.89
SPPL3-201ENST00000353487 ATP1B4Q9UN42 357 aaPredicted RBP20.54■□□□□ 0.88
SPPL3-201ENST00000353487 CNGB1Q14028 1251 aaPredicted RBP20.53■□□□□ 0.88
SPPL3-201ENST00000353487 RSF1Q96T23 1441 aaPredicted RBP20.52■□□□□ 0.88
SPPL3-201ENST00000353487 DAXXQ9UER7 740 aaPredicted RBP20.5■□□□□ 0.87
SPPL3-201ENST00000353487 NBR1Q14596 966 aa20.48■□□□□ 0.87
SPPL3-201ENST00000353487 FKBP8Q14318 412 aa20.46■□□□□ 0.87
SPPL3-201ENST00000353487 RTN4Q9NQC3 1192 aaKnown RBP20.4■□□□□ 0.86
SPPL3-201ENST00000353487 CDK11AQ9UQ88 783 aaPredicted RBP20.4■□□□□ 0.86
SPPL3-201ENST00000353487 CECR2Q9BXF3 1484 aa20.39■□□□□ 0.85
SPPL3-201ENST00000353487 CSRNP3Q8WYN3 585 aa20.38■□□□□ 0.85
SPPL3-201ENST00000353487 SUPT16HQ9Y5B9 1047 aaKnown RBP20.3■□□□□ 0.84
SPPL3-201ENST00000353487 TRIM52Q96A61 297 aa20.23■□□□□ 0.83
SPPL3-201ENST00000353487 RB1CC1Q8TDY2 1594 aa20.2■□□□□ 0.82
SPPL3-201ENST00000353487 DDX10Q13206 875 aaKnown RBP20.17■□□□□ 0.82
SPPL3-201ENST00000353487 PRKCSHP14314 528 aaPredicted RBP20.17■□□□□ 0.82
SPPL3-201ENST00000353487 NPM2Q86SE8 214 aaKnown RBP20.17■□□□□ 0.82
SPPL3-201ENST00000353487 IRX6P78412 446 aaPredicted RBP20.13■□□□□ 0.81
SPPL3-201ENST00000353487 POLR3GLQ9BT43 218 aa20.13■□□□□ 0.81
SPPL3-201ENST00000353487 MROH2BQ7Z745 1585 aa20.12■□□□□ 0.81
SPPL3-201ENST00000353487 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.12■□□□□ 0.81
SPPL3-201ENST00000353487 CLSPNQ9HAW4 1339 aa20.12■□□□□ 0.81
SPPL3-201ENST00000353487 TSHZ2Q9NRE2 1034 aa20.12■□□□□ 0.81
SPPL3-201ENST00000353487 CCDC136Q96JN2 1154 aa20.11■□□□□ 0.81
SPPL3-201ENST00000353487 ANP32CO43423 234 aa20.1■□□□□ 0.81
SPPL3-201ENST00000353487 HIRIP3Q9BW71 556 aaPredicted RBP20.1■□□□□ 0.81
SPPL3-201ENST00000353487 NACADO15069 1562 aa20.04■□□□□ 0.8
SPPL3-201ENST00000353487 FAM50AQ14320 339 aaKnown RBP20.04■□□□□ 0.8
SPPL3-201ENST00000353487 GLIPR1L2Q4G1C9 344 aa20.04■□□□□ 0.8
SPPL3-201ENST00000353487 ANP32AP39687 249 aaKnown RBP20■□□□□ 0.79
SPPL3-201ENST00000353487 ARXQ96QS3 562 aa19.95■□□□□ 0.78
SPPL3-201ENST00000353487 WIZO95785 1651 aa19.94■□□□□ 0.78
SPPL3-201ENST00000353487 HNRNPUQ00839 825 aaKnown RBP eCLIP19.94■□□□□ 0.78
SPPL3-201ENST00000353487 DEKP35659 375 aaKnown RBP19.94■□□□□ 0.78
SPPL3-201ENST00000353487 RBM19Q9Y4C8 960 aaKnown RBP19.92■□□□□ 0.78
SPPL3-201ENST00000353487 CEP162Q5TB80 1403 aa19.92■□□□□ 0.78
SPPL3-201ENST00000353487 MYT1LQ9UL68 1186 aa19.91■□□□□ 0.78
SPPL3-201ENST00000353487 KCNH8Q96L42 1107 aa19.85■□□□□ 0.77
SPPL3-201ENST00000353487 ZBTB47Q9UFB7 747 aaPredicted RBP19.83■□□□□ 0.76
SPPL3-201ENST00000353487 ABCC8Q09428 1581 aa19.77■□□□□ 0.76
SPPL3-201ENST00000353487 ANO8Q9HCE9 1232 aaPredicted RBP19.76■□□□□ 0.75
SPPL3-201ENST00000353487 FAM9BQ8IZU0 186 aa19.74■□□□□ 0.75
SPPL3-201ENST00000353487 SENP3-EIF4A1A0A087X0R7 540 aa19.73■□□□□ 0.75
SPPL3-201ENST00000353487 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
SPPL3-201ENST00000353487 SOGA1O94964 1423 aa19.72■□□□□ 0.75
SPPL3-201ENST00000353487 CCDC88BA6NC98 1476 aa19.7■□□□□ 0.74
SPPL3-201ENST00000353487 P3H3Q8IVL6 736 aa19.67■□□□□ 0.74
SPPL3-201ENST00000353487 CLIP1P30622 1438 aa19.64■□□□□ 0.73
SPPL3-201ENST00000353487 SIN3AQ96ST3 1273 aa19.62■□□□□ 0.73
SPPL3-201ENST00000353487 LAS1LQ9Y4W2 734 aaKnown RBP19.62■□□□□ 0.73
SPPL3-201ENST00000353487 NEFMP07197 916 aa19.61■□□□□ 0.73
SPPL3-201ENST00000353487 TNIKQ9UKE5 1360 aa19.6■□□□□ 0.73
SPPL3-201ENST00000353487 B4GALNT3Q6L9W6 998 aa19.57■□□□□ 0.72
SPPL3-201ENST00000353487 ZNF326Q5BKZ1 582 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms