RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 NUDCQ9Y266 331 aa27.31■■□□□ 1.96
UBC-201ENST00000339647 KDM6BO15054 1643 aa27.29■■□□□ 1.96
UBC-201ENST00000339647 RNF123Q5XPI4 1314 aa27.29■■□□□ 1.96
UBC-201ENST00000339647 HECW1Q76N89 1606 aa27.28■■□□□ 1.96
UBC-201ENST00000339647 CTTNBP2Q8WZ74 1663 aa27.26■■□□□ 1.95
UBC-201ENST00000339647 DNMBPQ6XZF7 1577 aa27.25■■□□□ 1.95
UBC-201ENST00000339647 IL27Q8NEV9 243 aa27.24■■□□□ 1.95
UBC-201ENST00000339647 SUPT6HQ7KZ85 1726 aaKnown RBP27.24■■□□□ 1.95
UBC-201ENST00000339647 SALL2Q9Y467 1007 aaPredicted RBP27.24■■□□□ 1.95
UBC-201ENST00000339647 LAMC3Q9Y6N6 1575 aa27.22■■□□□ 1.95
UBC-201ENST00000339647 GCC2Q8IWJ2 1684 aa27.2■■□□□ 1.94
UBC-201ENST00000339647 GRIN2BQ13224 1484 aa27.2■■□□□ 1.94
UBC-201ENST00000339647 SPATA31E1Q6ZUB1 1445 aa27.2■■□□□ 1.94
UBC-201ENST00000339647 ABCA10Q8WWZ4 1543 aa27.19■■□□□ 1.94
UBC-201ENST00000339647 PDS5BQ9NTI5 1447 aa27.19■■□□□ 1.94
UBC-201ENST00000339647 UGGT2Q9NYU1 1516 aa27.19■■□□□ 1.94
UBC-201ENST00000339647 KIF21AQ7Z4S6 1674 aa27.19■■□□□ 1.94
UBC-201ENST00000339647 EHBP1L1Q8N3D4 1523 aa27.17■■□□□ 1.94
UBC-201ENST00000339647 NPM2Q86SE8 214 aaKnown RBP27.17■■□□□ 1.94
UBC-201ENST00000339647 RTN4Q9NQC3 1192 aaKnown RBP27.15■■□□□ 1.94
UBC-201ENST00000339647 MAGI3Q5TCQ9 1506 aa27.15■■□□□ 1.94
UBC-201ENST00000339647 POLR3GLQ9BT43 218 aa27.14■■□□□ 1.94
UBC-201ENST00000339647 DHX29Q7Z478 1369 aaKnown RBP27.14■■□□□ 1.94
UBC-201ENST00000339647 ABCA5Q8WWZ7 1642 aa27.12■■□□□ 1.93
UBC-201ENST00000339647 CUL7Q14999 1698 aa27.12■■□□□ 1.93
UBC-201ENST00000339647 ANKRD30BQ9BXX2 1392 aa27.12■■□□□ 1.93
UBC-201ENST00000339647 ARHGEF11O15085 1522 aa27.12■■□□□ 1.93
UBC-201ENST00000339647 TCOF1Q13428 1488 aaKnown RBP27.11■■□□□ 1.93
UBC-201ENST00000339647 TEX14Q8IWB6 1497 aa27.11■■□□□ 1.93
UBC-201ENST00000339647 RPRD2Q5VT52 1461 aaKnown RBP27.1■■□□□ 1.93
UBC-201ENST00000339647 LAS1LQ9Y4W2 734 aaKnown RBP27.1■■□□□ 1.93
UBC-201ENST00000339647 SAMD9Q5K651 1589 aa27.1■■□□□ 1.93
UBC-201ENST00000339647 POLR1AO95602 1720 aaPredicted RBP27.09■■□□□ 1.93
UBC-201ENST00000339647 NEFMP07197 916 aa27.05■■□□□ 1.92
UBC-201ENST00000339647 PNISRQ8TF01 805 aaKnown RBP27.05■■□□□ 1.92
UBC-201ENST00000339647 THOC2Q8NI27 1593 aaKnown RBP27.04■■□□□ 1.92
UBC-201ENST00000339647 EXOC6Q8TAG9 804 aa27.02■■□□□ 1.92
UBC-201ENST00000339647 PDE4AP27815 886 aa27■■□□□ 1.91
UBC-201ENST00000339647 TMC1Q8TDI8 760 aa27■■□□□ 1.91
UBC-201ENST00000339647 SLC4A1APQ9BWU0 796 aaKnown RBP26.99■■□□□ 1.91
UBC-201ENST00000339647 TCERG1O14776 1098 aaKnown RBP26.97■■□□□ 1.91
UBC-201ENST00000339647 RRP1P56182 461 aaKnown RBP26.96■■□□□ 1.91
UBC-201ENST00000339647 BCORL1Q5H9F3 1711 aa26.96■■□□□ 1.91
UBC-201ENST00000339647 ZNF326Q5BKZ1 582 aaKnown RBP26.95■■□□□ 1.91
UBC-201ENST00000339647 MIA2Q96PC5 1412 aa26.95■■□□□ 1.91
UBC-201ENST00000339647 GAPVD1Q14C86 1478 aa26.95■■□□□ 1.9
UBC-201ENST00000339647 ARID3CA6NKF2 412 aa26.95■■□□□ 1.9
UBC-201ENST00000339647 BACH2Q9BYV9 841 aa26.93■■□□□ 1.9
UBC-201ENST00000339647 USP47Q96K76 1375 aa26.93■■□□□ 1.9
UBC-201ENST00000339647 USP35Q9P2H5 1018 aa26.93■■□□□ 1.9
UBC-201ENST00000339647 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.91■■□□□ 1.9
UBC-201ENST00000339647 WASHC2CQ9Y4E1 1318 aa26.88■■□□□ 1.89
UBC-201ENST00000339647 RCAN3Q9UKA8 241 aa26.86■■□□□ 1.89
UBC-201ENST00000339647 CDK13Q14004 1512 aaKnown RBP26.85■■□□□ 1.89
UBC-201ENST00000339647 DAPK1P53355 1430 aa26.85■■□□□ 1.89
UBC-201ENST00000339647 LRPPRCP42704 1394 aaKnown RBP26.84■■□□□ 1.89
UBC-201ENST00000339647 PPM1GO15355 546 aaPredicted RBP26.84■■□□□ 1.89
UBC-201ENST00000339647 EPRSP07814 1512 aaKnown RBP26.84■■□□□ 1.89
UBC-201ENST00000339647 ZNF608Q9ULD9 1512 aaPredicted RBP26.84■■□□□ 1.89
UBC-201ENST00000339647 ZNF644Q9H582 1327 aaPredicted RBP26.83■■□□□ 1.89
UBC-201ENST00000339647 ROCK1Q13464 1354 aa26.82■■□□□ 1.88
UBC-201ENST00000339647 SKAP1Q86WV1 359 aa26.82■■□□□ 1.88
UBC-201ENST00000339647 MS4A1P11836 297 aa26.82■■□□□ 1.88
UBC-201ENST00000339647 ABCC5O15440 1437 aa26.81■■□□□ 1.88
UBC-201ENST00000339647 MBD5Q9P267 1494 aa26.8■■□□□ 1.88
UBC-201ENST00000339647 MRC2Q9UBG0 1479 aa26.8■■□□□ 1.88
UBC-201ENST00000339647 TARBP1Q13395 1621 aaKnown RBP26.8■■□□□ 1.88
UBC-201ENST00000339647 ERCC6Q03468 1493 aa26.79■■□□□ 1.88
UBC-201ENST00000339647 BRPF3Q9ULD4 1205 aa26.79■■□□□ 1.88
UBC-201ENST00000339647 ARID4BQ4LE39 1312 aaPredicted RBP26.79■■□□□ 1.88
UBC-201ENST00000339647 KDM5CP41229 1560 aa26.76■■□□□ 1.87
UBC-201ENST00000339647 KIF15Q9NS87 1388 aa26.76■■□□□ 1.87
UBC-201ENST00000339647 PZPP20742 1482 aa26.76■■□□□ 1.87
UBC-201ENST00000339647 MYBBP1AQ9BQG0 1328 aaKnown RBP26.75■■□□□ 1.87
UBC-201ENST00000339647 BRD4O60885 1362 aaPredicted RBP26.75■■□□□ 1.87
UBC-201ENST00000339647 ROCK2O75116 1388 aaKnown RBP26.73■■□□□ 1.87
UBC-201ENST00000339647 PLIN1O60240 522 aa26.73■■□□□ 1.87
UBC-201ENST00000339647 CDCA7LQ96GN5 454 aa26.72■■□□□ 1.87
UBC-201ENST00000339647 GSE1Q14687 1217 aa26.71■■□□□ 1.87
UBC-201ENST00000339647 DNMT1P26358 1616 aaKnown RBP26.71■■□□□ 1.87
UBC-201ENST00000339647 SLC4A3P48751 1232 aa26.7■■□□□ 1.86
UBC-201ENST00000339647 FBLN2P98095 1184 aa26.69■■□□□ 1.86
UBC-201ENST00000339647 CARD11Q9BXL7 1154 aa26.69■■□□□ 1.86
UBC-201ENST00000339647 KIF14Q15058 1648 aa26.68■■□□□ 1.86
UBC-201ENST00000339647 RALBP1Q15311 655 aa26.68■■□□□ 1.86
UBC-201ENST00000339647 NFKBIBQ15653 356 aa26.68■■□□□ 1.86
UBC-201ENST00000339647 PKD2Q13563 968 aa26.67■■□□□ 1.86
UBC-201ENST00000339647 DDRGK1Q96HY6 314 aa26.67■■□□□ 1.86
UBC-201ENST00000339647 ST20-MTHFSA0A0A6YYL1 179 aa26.66■■□□□ 1.86
UBC-201ENST00000339647 KIAA1107Q9UPP5 1409 aa26.65■■□□□ 1.86
UBC-201ENST00000339647 CRBNQ96SW2 442 aa26.64■■□□□ 1.86
UBC-201ENST00000339647 PDE3BQ13370 1112 aa26.63■■□□□ 1.85
UBC-201ENST00000339647 WDR62O43379 1518 aa26.62■■□□□ 1.85
UBC-201ENST00000339647 FRAT1Q92837 279 aaPredicted RBP26.62■■□□□ 1.85
UBC-201ENST00000339647 KDM2AQ9Y2K7 1162 aa26.59■■□□□ 1.85
UBC-201ENST00000339647 KTN1Q86UP2 1357 aaKnown RBP26.59■■□□□ 1.85
UBC-201ENST00000339647 RALGAPBQ86X10 1494 aa26.58■■□□□ 1.85
UBC-201ENST00000339647 NLRP13Q86W25 1043 aa26.58■■□□□ 1.85
UBC-201ENST00000339647 UHRF1BP1Q6BDS2 1440 aa26.56■■□□□ 1.84
UBC-201ENST00000339647 PBRM1Q86U86 1689 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms