RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 WASHC2AQ641Q2 1341 aa20.82■□□□□ 0.92
UBA1-201ENST00000335972 ZNF326Q5BKZ1 582 aaKnown RBP20.82■□□□□ 0.92
UBA1-201ENST00000335972 CDK11AQ9UQ88 783 aaPredicted RBP20.81■□□□□ 0.92
UBA1-201ENST00000335972 EIF4G3O43432 1585 aaKnown RBP20.81■□□□□ 0.92
UBA1-201ENST00000335972 KIAA0556O60303 1618 aa20.81■□□□□ 0.92
UBA1-201ENST00000335972 C11orf95C9JLR9 678 aaPredicted RBP20.8■□□□□ 0.92
UBA1-201ENST00000335972 ABCC5O15440 1437 aa20.8■□□□□ 0.92
UBA1-201ENST00000335972 DAPK1P53355 1430 aa20.8■□□□□ 0.92
UBA1-201ENST00000335972 NBPF8Q3BBV2 869 aa20.8■□□□□ 0.92
UBA1-201ENST00000335972 MIA2Q96PC5 1412 aa20.79■□□□□ 0.92
UBA1-201ENST00000335972 JPH4Q96JJ6 628 aa20.79■□□□□ 0.92
UBA1-201ENST00000335972 EIF4G2P78344 907 aaKnown RBP eCLIP20.78■□□□□ 0.92
UBA1-201ENST00000335972 POLR3GLQ9BT43 218 aa20.77■□□□□ 0.92
UBA1-201ENST00000335972 CCER2I3L3R5 266 aa20.77■□□□□ 0.92
UBA1-201ENST00000335972 HNRNPUQ00839 825 aaKnown RBP eCLIP20.75■□□□□ 0.91
UBA1-201ENST00000335972 CCDC184Q52MB2 194 aa20.75■□□□□ 0.91
UBA1-201ENST00000335972 GCC2Q8IWJ2 1684 aa20.74■□□□□ 0.91
UBA1-201ENST00000335972 RAPGEF6Q8TEU7 1601 aa20.73■□□□□ 0.91
UBA1-201ENST00000335972 IRX6P78412 446 aaPredicted RBP20.72■□□□□ 0.91
UBA1-201ENST00000335972 CEP170Q5SW79 1584 aa20.7■□□□□ 0.9
UBA1-201ENST00000335972 ANKRD30BQ9BXX2 1392 aa20.69■□□□□ 0.9
UBA1-201ENST00000335972 SENP3-EIF4A1A0A087X0R7 540 aa20.69■□□□□ 0.9
UBA1-201ENST00000335972 TSHZ2Q9NRE2 1034 aa20.68■□□□□ 0.9
UBA1-201ENST00000335972 NEFLP07196 543 aa20.67■□□□□ 0.9
UBA1-201ENST00000335972 TROQ12816 1431 aaPredicted RBP20.67■□□□□ 0.9
UBA1-201ENST00000335972 KIF14Q15058 1648 aa20.66■□□□□ 0.9
UBA1-201ENST00000335972 AKNAQ7Z591 1439 aa20.66■□□□□ 0.9
UBA1-201ENST00000335972 PKD2Q13563 968 aa20.66■□□□□ 0.9
UBA1-201ENST00000335972 FAM9BQ8IZU0 186 aa20.66■□□□□ 0.9
UBA1-201ENST00000335972 PLEKHD1A6NEE1 506 aa20.65■□□□□ 0.9
UBA1-201ENST00000335972 CAMSAP2Q08AD1 1489 aa20.65■□□□□ 0.9
UBA1-201ENST00000335972 SYNJ2O15056 1496 aa20.64■□□□□ 0.9
UBA1-201ENST00000335972 GPATCH8Q9UKJ3 1502 aaKnown RBP20.63■□□□□ 0.89
UBA1-201ENST00000335972 DNMT1P26358 1616 aaKnown RBP20.63■□□□□ 0.89
UBA1-201ENST00000335972 ROCK1Q13464 1354 aa20.63■□□□□ 0.89
UBA1-201ENST00000335972 HNRNPMP52272 730 aaKnown RBP eCLIP20.62■□□□□ 0.89
UBA1-201ENST00000335972 MAGI1Q96QZ7 1491 aaPredicted RBP20.61■□□□□ 0.89
UBA1-201ENST00000335972 CARMIL2Q6F5E8 1435 aa20.6■□□□□ 0.89
UBA1-201ENST00000335972 KDM2AQ9Y2K7 1162 aa20.6■□□□□ 0.89
UBA1-201ENST00000335972 NCOA1Q15788 1441 aa20.59■□□□□ 0.89
UBA1-201ENST00000335972 RPRD2Q5VT52 1461 aaKnown RBP20.59■□□□□ 0.89
UBA1-201ENST00000335972 CCDC7Q96M83 1385 aa20.58■□□□□ 0.89
UBA1-201ENST00000335972 KIF7Q2M1P5 1343 aa20.57■□□□□ 0.88
UBA1-201ENST00000335972 MRS2Q9HD23 443 aa20.56■□□□□ 0.88
UBA1-201ENST00000335972 PZPP20742 1482 aa20.56■□□□□ 0.88
UBA1-201ENST00000335972 TEX14Q8IWB6 1497 aa20.55■□□□□ 0.88
UBA1-201ENST00000335972 CNTLNQ9NXG0 1405 aa20.54■□□□□ 0.88
UBA1-201ENST00000335972 PRKRIP1Q9H875 184 aaPredicted RBP20.54■□□□□ 0.88
UBA1-201ENST00000335972 NUP155O75694 1391 aa20.54■□□□□ 0.88
UBA1-201ENST00000335972 ANKRD30AQ9BXX3 1397 aa20.52■□□□□ 0.88
UBA1-201ENST00000335972 TSPY4P0CV99 314 aa20.52■□□□□ 0.88
UBA1-201ENST00000335972 TSPY10P0CW01 314 aa20.52■□□□□ 0.88
UBA1-201ENST00000335972 ATP10BO94823 1461 aa20.52■□□□□ 0.87
UBA1-201ENST00000335972 NUP160Q12769 1436 aa20.51■□□□□ 0.87
UBA1-201ENST00000335972 ANKRD50Q9ULJ7 1429 aa20.51■□□□□ 0.87
UBA1-201ENST00000335972 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.49■□□□□ 0.871e-6■■□□□ 11.9
UBA1-201ENST00000335972 MYT1Q01538 1121 aa20.48■□□□□ 0.87
UBA1-201ENST00000335972 KIAA1107Q9UPP5 1409 aa20.46■□□□□ 0.87
UBA1-201ENST00000335972 PTPRGP23470 1445 aa20.45■□□□□ 0.86
UBA1-201ENST00000335972 C9orf84Q5VXU9 1444 aa20.45■□□□□ 0.86
UBA1-201ENST00000335972 RGL3Q3MIN7 710 aa20.44■□□□□ 0.86
UBA1-201ENST00000335972 DCAF11Q8TEB1 546 aa20.44■□□□□ 0.86
UBA1-201ENST00000335972 USP47Q96K76 1375 aa20.44■□□□□ 0.86
UBA1-201ENST00000335972 SPATA31E1Q6ZUB1 1445 aa20.42■□□□□ 0.86
UBA1-201ENST00000335972 ITSN2Q9NZM3 1697 aa20.42■□□□□ 0.86
UBA1-201ENST00000335972 CARD11Q9BXL7 1154 aa20.42■□□□□ 0.86
UBA1-201ENST00000335972 KIF15Q9NS87 1388 aa20.41■□□□□ 0.86
UBA1-201ENST00000335972 ABCC10Q5T3U5 1492 aa20.39■□□□□ 0.85
UBA1-201ENST00000335972 CDC42BPAQ5VT25 1732 aa20.39■□□□□ 0.85
UBA1-201ENST00000335972 ABCA8O94911 1581 aa20.39■□□□□ 0.85
UBA1-201ENST00000335972 ST20-MTHFSA0A0A6YYL1 179 aa20.36■□□□□ 0.85
UBA1-201ENST00000335972 ADGRL2O95490 1459 aa20.36■□□□□ 0.85
UBA1-201ENST00000335972 ADGBQ8N7X0 1667 aa20.36■□□□□ 0.85
UBA1-201ENST00000335972 ADCY10Q96PN6 1610 aa20.34■□□□□ 0.85
UBA1-201ENST00000335972 CROCC2H7BZ55 1655 aa20.32■□□□□ 0.84
UBA1-201ENST00000335972 RBM19Q9Y4C8 960 aaKnown RBP20.32■□□□□ 0.84
UBA1-201ENST00000335972 BCORL1Q5H9F3 1711 aa20.32■□□□□ 0.84
UBA1-201ENST00000335972 MBD5Q9P267 1494 aa20.3■□□□□ 0.84
UBA1-201ENST00000335972 DHX29Q7Z478 1369 aaKnown RBP20.29■□□□□ 0.84
UBA1-201ENST00000335972 NBPF1Q3BBV0 1214 aa20.28■□□□□ 0.84
UBA1-201ENST00000335972 ERCC6L2Q5T890 1561 aa20.28■□□□□ 0.84
UBA1-201ENST00000335972 B4GALNT3Q6L9W6 998 aa20.28■□□□□ 0.84
UBA1-201ENST00000335972 SALL2Q9Y467 1007 aaPredicted RBP20.28■□□□□ 0.84
UBA1-201ENST00000335972 ROCK2O75116 1388 aaKnown RBP20.24■□□□□ 0.83
UBA1-201ENST00000335972 SAMD9LQ8IVG5 1584 aa20.24■□□□□ 0.83
UBA1-201ENST00000335972 ZBED9Q6R2W3 1325 aa20.23■□□□□ 0.83
UBA1-201ENST00000335972 TMC1Q8TDI8 760 aa20.23■□□□□ 0.83
UBA1-201ENST00000335972 ARHGAP5Q13017 1502 aa20.23■□□□□ 0.83
UBA1-201ENST00000335972 SYCP2Q9BX26 1530 aa20.23■□□□□ 0.83
UBA1-201ENST00000335972 CCDC141Q6ZP82 1450 aa20.22■□□□□ 0.83
UBA1-201ENST00000335972 CHD1O14646 1710 aa20.21■□□□□ 0.83
UBA1-201ENST00000335972 SHANK2Q9UPX8 1470 aa20.21■□□□□ 0.83
UBA1-201ENST00000335972 KDM5CP41229 1560 aa20.2■□□□□ 0.82
UBA1-201ENST00000335972 CDC42BPBQ9Y5S2 1711 aa20.19■□□□□ 0.82
UBA1-201ENST00000335972 TTC37Q6PGP7 1564 aa20.18■□□□□ 0.82
UBA1-201ENST00000335972 PLEKHH2Q8IVE3 1493 aa20.18■□□□□ 0.82
UBA1-201ENST00000335972 FAM135AQ9P2D6 1515 aa20.17■□□□□ 0.82
UBA1-201ENST00000335972 CCDC144AA2RUR9 1427 aa20.17■□□□□ 0.82
UBA1-201ENST00000335972 RALGAPBQ86X10 1494 aa20.16■□□□□ 0.82
UBA1-201ENST00000335972 MYT1LQ9UL68 1186 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms