RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 MYOM3Q5VTT5 1437 aa22.21■■□□□ 1.15
UPK3B-202ENST00000334348 FAM9BQ8IZU0 186 aa22.2■■□□□ 1.15
UPK3B-202ENST00000334348 NUP160Q12769 1436 aa22.2■■□□□ 1.14
UPK3B-202ENST00000334348 MRS2Q9HD23 443 aa22.19■■□□□ 1.14
UPK3B-202ENST00000334348 NCOA1Q15788 1441 aa22.19■■□□□ 1.14
UPK3B-202ENST00000334348 CCDC7Q96M83 1385 aa22.18■■□□□ 1.14
UPK3B-202ENST00000334348 PAK3O75914 559 aaPredicted RBP22.14■■□□□ 1.14
UPK3B-202ENST00000334348 DENND4BO75064 1496 aaPredicted RBP22.14■■□□□ 1.14
UPK3B-202ENST00000334348 C11orf95C9JLR9 678 aaPredicted RBP22.14■■□□□ 1.13
UPK3B-202ENST00000334348 HECW1Q76N89 1606 aa22.12■■□□□ 1.13
UPK3B-202ENST00000334348 NBR1Q14596 966 aa22.11■■□□□ 1.13
UPK3B-202ENST00000334348 JPH4Q96JJ6 628 aa22.11■■□□□ 1.13
UPK3B-202ENST00000334348 KIAA0586Q9BVV6 1533 aa22.1■■□□□ 1.13
UPK3B-202ENST00000334348 SMG6Q86US8 1419 aaKnown RBP22.1■■□□□ 1.13
UPK3B-202ENST00000334348 CLASP1Q7Z460 1538 aa22.09■■□□□ 1.13
UPK3B-202ENST00000334348 L3MBTL2Q969R5 705 aa22.08■■□□□ 1.13
UPK3B-202ENST00000334348 SUPT6HQ7KZ85 1726 aaKnown RBP22.08■■□□□ 1.12
UPK3B-202ENST00000334348 AKNAQ7Z591 1439 aa22.08■■□□□ 1.12
UPK3B-202ENST00000334348 IPO9Q96P70 1041 aaKnown RBP22.07■■□□□ 1.12
UPK3B-202ENST00000334348 RNF123Q5XPI4 1314 aa22.07■■□□□ 1.12
UPK3B-202ENST00000334348 EHBP1L1Q8N3D4 1523 aa22.06■■□□□ 1.12
UPK3B-202ENST00000334348 RRP7BPQ9NSQ0 103 aa22.06■■□□□ 1.12
UPK3B-202ENST00000334348 GCC2Q8IWJ2 1684 aa22.06■■□□□ 1.12
UPK3B-202ENST00000334348 ANP32AP39687 249 aaKnown RBP22.06■■□□□ 1.12
UPK3B-202ENST00000334348 IQGAP2Q13576 1575 aa22.06■■□□□ 1.12
UPK3B-202ENST00000334348 TCOF1Q13428 1488 aaKnown RBP22.04■■□□□ 1.12
UPK3B-202ENST00000334348 ARHGEF11O15085 1522 aa22.04■■□□□ 1.12
UPK3B-202ENST00000334348 UGGT2Q9NYU1 1516 aa22.04■■□□□ 1.12
UPK3B-202ENST00000334348 ERCC6L2Q5T890 1561 aa22.04■■□□□ 1.12
UPK3B-202ENST00000334348 MPHOSPH9Q99550 1183 aa22.03■■□□□ 1.12
UPK3B-202ENST00000334348 LRRIQ1Q96JM4 1722 aa22.03■■□□□ 1.12
UPK3B-202ENST00000334348 SAMD9Q5K651 1589 aa22.02■■□□□ 1.12
UPK3B-202ENST00000334348 NUDCQ9Y266 331 aa22.02■■□□□ 1.11
UPK3B-202ENST00000334348 KIF7Q2M1P5 1343 aa22.01■■□□□ 1.11
UPK3B-202ENST00000334348 CCDC136Q96JN2 1154 aa22.01■■□□□ 1.11
UPK3B-202ENST00000334348 SPATA31E1Q6ZUB1 1445 aa22■■□□□ 1.11
UPK3B-202ENST00000334348 PRG4Q92954 1404 aaPredicted RBP21.99■■□□□ 1.11
UPK3B-202ENST00000334348 ZBTB47Q9UFB7 747 aaPredicted RBP21.99■■□□□ 1.11
UPK3B-202ENST00000334348 RTL5Q5HYW3 569 aaPredicted RBP21.99■■□□□ 1.11
UPK3B-202ENST00000334348 CHIC2Q9UKJ5 165 aa21.99■■□□□ 1.11
UPK3B-202ENST00000334348 NBPF8Q3BBV2 869 aa21.97■■□□□ 1.11
UPK3B-202ENST00000334348 KDM6BO15054 1643 aa21.96■■□□□ 1.11
UPK3B-202ENST00000334348 PRKCSHP14314 528 aaPredicted RBP21.95■■□□□ 1.1
UPK3B-202ENST00000334348 DISP1Q96F81 1524 aa21.95■■□□□ 1.1
UPK3B-202ENST00000334348 RPRD2Q5VT52 1461 aaKnown RBP21.94■■□□□ 1.1
UPK3B-202ENST00000334348 SHROOM2Q13796 1616 aa21.94■■□□□ 1.1
UPK3B-202ENST00000334348 POLR1AO95602 1720 aaPredicted RBP21.94■■□□□ 1.1
UPK3B-202ENST00000334348 ANKRD30BQ9BXX2 1392 aa21.93■■□□□ 1.1
UPK3B-202ENST00000334348 TEX14Q8IWB6 1497 aa21.93■■□□□ 1.1
UPK3B-202ENST00000334348 MAGI3Q5TCQ9 1506 aa21.92■■□□□ 1.1
UPK3B-202ENST00000334348 DHX29Q7Z478 1369 aaKnown RBP21.9■■□□□ 1.1
UPK3B-202ENST00000334348 FOXD1Q16676 465 aa21.9■■□□□ 1.1
UPK3B-202ENST00000334348 DNAJC5Q9H3Z4 198 aa21.89■■□□□ 1.1
UPK3B-202ENST00000334348 MIA2Q96PC5 1412 aa21.88■■□□□ 1.09
UPK3B-202ENST00000334348 KIAA0556O60303 1618 aa21.85■■□□□ 1.09
UPK3B-202ENST00000334348 RIMBP3CA6NJZ7 1639 aa21.83■■□□□ 1.09
UPK3B-202ENST00000334348 RIMBP3BA6NNM3 1639 aa21.83■■□□□ 1.09
UPK3B-202ENST00000334348 RIMBP3Q9UFD9 1639 aa21.83■■□□□ 1.09
UPK3B-202ENST00000334348 CYB5RLQ6IPT4 315 aa21.83■■□□□ 1.08
UPK3B-202ENST00000334348 CARMIL2Q6F5E8 1435 aa21.82■■□□□ 1.08
UPK3B-202ENST00000334348 ROCK1Q13464 1354 aa21.82■■□□□ 1.08
UPK3B-202ENST00000334348 PNISRQ8TF01 805 aaKnown RBP21.8■■□□□ 1.08
UPK3B-202ENST00000334348 ANO8Q9HCE9 1232 aaPredicted RBP21.8■■□□□ 1.08
UPK3B-202ENST00000334348 ARID3CA6NKF2 412 aa21.79■■□□□ 1.08
UPK3B-202ENST00000334348 ARID4BQ4LE39 1312 aaPredicted RBP21.79■■□□□ 1.08
UPK3B-202ENST00000334348 USP35Q9P2H5 1018 aa21.79■■□□□ 1.08
UPK3B-202ENST00000334348 TCERG1O14776 1098 aaKnown RBP21.78■■□□□ 1.08
UPK3B-202ENST00000334348 PTPRGP23470 1445 aa21.76■■□□□ 1.07
UPK3B-202ENST00000334348 SLC4A1APQ9BWU0 796 aaKnown RBP21.74■■□□□ 1.07
UPK3B-202ENST00000334348 EPRSP07814 1512 aaKnown RBP21.74■■□□□ 1.07
UPK3B-202ENST00000334348 PLB1Q6P1J6 1458 aa21.74■■□□□ 1.07
UPK3B-202ENST00000334348 DAPK1P53355 1430 aa21.73■■□□□ 1.07
UPK3B-202ENST00000334348 USP47Q96K76 1375 aa21.73■■□□□ 1.07
UPK3B-202ENST00000334348 IL27Q8NEV9 243 aa21.73■■□□□ 1.07
UPK3B-202ENST00000334348 TMC1Q8TDI8 760 aa21.73■■□□□ 1.07
UPK3B-202ENST00000334348 RRP1P56182 461 aaKnown RBP21.72■■□□□ 1.07
UPK3B-202ENST00000334348 MBD5Q9P267 1494 aa21.72■■□□□ 1.07
UPK3B-202ENST00000334348 LRPPRCP42704 1394 aaKnown RBP21.71■■□□□ 1.07
UPK3B-202ENST00000334348 ROCK2O75116 1388 aaKnown RBP21.71■■□□□ 1.07
UPK3B-202ENST00000334348 BCORL1Q5H9F3 1711 aa21.71■■□□□ 1.07
UPK3B-202ENST00000334348 SALL2Q9Y467 1007 aaPredicted RBP21.7■■□□□ 1.07
UPK3B-202ENST00000334348 MS4A1P11836 297 aa21.7■■□□□ 1.06
UPK3B-202ENST00000334348 PDE4AP27815 886 aa21.7■■□□□ 1.06
UPK3B-202ENST00000334348 CNGB1Q14028 1251 aaPredicted RBP21.69■■□□□ 1.06
UPK3B-202ENST00000334348 NEFMP07197 916 aa21.69■■□□□ 1.06
UPK3B-202ENST00000334348 NPM2Q86SE8 214 aaKnown RBP21.69■■□□□ 1.06
UPK3B-202ENST00000334348 ABCC5O15440 1437 aa21.69■■□□□ 1.06
UPK3B-202ENST00000334348 BACH2Q9BYV9 841 aa21.68■■□□□ 1.06
UPK3B-202ENST00000334348 EXOC6Q8TAG9 804 aa21.67■■□□□ 1.06
UPK3B-202ENST00000334348 POLR3GLQ9BT43 218 aa21.67■■□□□ 1.06
UPK3B-202ENST00000334348 WASHC2CQ9Y4E1 1318 aa21.67■■□□□ 1.06
UPK3B-202ENST00000334348 PPM1GO15355 546 aaPredicted RBP21.67■■□□□ 1.06
UPK3B-202ENST00000334348 DNMT1P26358 1616 aaKnown RBP21.65■■□□□ 1.06
UPK3B-202ENST00000334348 BRD4O60885 1362 aaPredicted RBP21.65■■□□□ 1.06
UPK3B-202ENST00000334348 CDK13Q14004 1512 aaKnown RBP21.65■■□□□ 1.06
UPK3B-202ENST00000334348 LAS1LQ9Y4W2 734 aaKnown RBP21.65■■□□□ 1.06
UPK3B-202ENST00000334348 KIF15Q9NS87 1388 aa21.64■■□□□ 1.06
UPK3B-202ENST00000334348 KTN1Q86UP2 1357 aaKnown RBP21.64■■□□□ 1.05
UPK3B-202ENST00000334348 PZPP20742 1482 aa21.64■■□□□ 1.05
UPK3B-202ENST00000334348 KDM5CP41229 1560 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms