RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 FYCO1Q9BQS8 1478 aa15.86■□□□□ 0.13
LIMK2-202ENST00000333611 NCOA2Q15596 1464 aa15.85■□□□□ 0.13
LIMK2-202ENST00000333611 HFM1A2PYH4 1435 aa15.85■□□□□ 0.13
LIMK2-202ENST00000333611 NESP48681 1621 aa15.83■□□□□ 0.12
LIMK2-202ENST00000333611 NBPF8Q3BBV2 869 aa15.82■□□□□ 0.12
LIMK2-202ENST00000333611 MYOM3Q5VTT5 1437 aa15.82■□□□□ 0.12
LIMK2-202ENST00000333611 RSPH6AQ9H0K4 717 aa15.81■□□□□ 0.12
LIMK2-202ENST00000333611 GSE1Q14687 1217 aa15.81■□□□□ 0.12
LIMK2-202ENST00000333611 FRAT1Q92837 279 aaPredicted RBP15.8■□□□□ 0.12
LIMK2-202ENST00000333611 KDM2AQ9Y2K7 1162 aa15.8■□□□□ 0.12
LIMK2-202ENST00000333611 ZNF644Q9H582 1327 aaPredicted RBP15.79■□□□□ 0.12
LIMK2-202ENST00000333611 CFAP43Q8NDM7 1665 aa15.79■□□□□ 0.12
LIMK2-202ENST00000333611 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
LIMK2-202ENST00000333611 PTPN23Q9H3S7 1636 aa15.78■□□□□ 0.12
LIMK2-202ENST00000333611 CCDC7Q96M83 1385 aa15.78■□□□□ 0.12
LIMK2-202ENST00000333611 CNTLNQ9NXG0 1405 aa15.78■□□□□ 0.12
LIMK2-202ENST00000333611 KIF7Q2M1P5 1343 aa15.77■□□□□ 0.12
LIMK2-202ENST00000333611 PPM1GO15355 546 aaPredicted RBP15.77■□□□□ 0.12
LIMK2-202ENST00000333611 TMC1Q8TDI8 760 aa15.77■□□□□ 0.12
LIMK2-202ENST00000333611 HSP90AA2PQ14568 343 aaPredicted RBP15.77■□□□□ 0.11
LIMK2-202ENST00000333611 SLC24A1O60721 1099 aa15.76■□□□□ 0.11
LIMK2-202ENST00000333611 AKNAQ7Z591 1439 aa15.76■□□□□ 0.11
LIMK2-202ENST00000333611 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.75■□□□□ 0.11
LIMK2-202ENST00000333611 ZBED9Q6R2W3 1325 aa15.74■□□□□ 0.11
LIMK2-202ENST00000333611 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
LIMK2-202ENST00000333611 ARID3AQ99856 593 aa15.73■□□□□ 0.11
LIMK2-202ENST00000333611 EFCAB5A4FU69 1503 aa15.72■□□□□ 0.11
LIMK2-202ENST00000333611 FBLN2P98095 1184 aa15.69■□□□□ 0.1
LIMK2-202ENST00000333611 SNAPC4Q5SXM2 1469 aa15.69■□□□□ 0.1
LIMK2-202ENST00000333611 HSP90AA1P07900 732 aaKnown RBP15.69■□□□□ 0.1
LIMK2-202ENST00000333611 DNAJC5BQ9UF47 199 aa15.68■□□□□ 0.1
LIMK2-202ENST00000333611 ABCA10Q8WWZ4 1543 aa15.68■□□□□ 0.1
LIMK2-202ENST00000333611 NFKBIBQ15653 356 aa15.67■□□□□ 0.1
LIMK2-202ENST00000333611 NUDCQ9Y266 331 aa15.66■□□□□ 0.1
LIMK2-202ENST00000333611 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
LIMK2-202ENST00000333611 PKD2Q13563 968 aa15.65■□□□□ 0.1
LIMK2-202ENST00000333611 CARD11Q9BXL7 1154 aa15.65■□□□□ 0.1
LIMK2-202ENST00000333611 USP35Q9P2H5 1018 aa15.65■□□□□ 0.1
LIMK2-202ENST00000333611 CDK13Q14004 1512 aaKnown RBP15.65■□□□□ 0.1
LIMK2-202ENST00000333611 SKAP1Q86WV1 359 aa15.64■□□□□ 0.09
LIMK2-202ENST00000333611 CFDP1Q9UEE9 299 aaPredicted RBP15.64■□□□□ 0.09
LIMK2-202ENST00000333611 KDM6BO15054 1643 aa15.63■□□□□ 0.09
LIMK2-202ENST00000333611 DNMBPQ6XZF7 1577 aa15.63■□□□□ 0.09
LIMK2-202ENST00000333611 PNNQ9H307 717 aaKnown RBP15.63■□□□□ 0.09
LIMK2-202ENST00000333611 SUPT6HQ7KZ85 1726 aaKnown RBP15.63■□□□□ 0.09
LIMK2-202ENST00000333611 NCOA1Q15788 1441 aa15.62■□□□□ 0.09
LIMK2-202ENST00000333611 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
LIMK2-202ENST00000333611 KDM5BQ9UGL1 1544 aa15.61■□□□□ 0.09
LIMK2-202ENST00000333611 PDE4AP27815 886 aa15.6■□□□□ 0.09
LIMK2-202ENST00000333611 EHBP1L1Q8N3D4 1523 aa15.6■□□□□ 0.09
LIMK2-202ENST00000333611 RGL3Q3MIN7 710 aa15.6■□□□□ 0.09
LIMK2-202ENST00000333611 USP47Q96K76 1375 aa15.6■□□□□ 0.09
LIMK2-202ENST00000333611 MAGI3Q5TCQ9 1506 aa15.6■□□□□ 0.09
LIMK2-202ENST00000333611 GRIN2BQ13224 1484 aa15.59■□□□□ 0.09
LIMK2-202ENST00000333611 AMER1Q5JTC6 1135 aaPredicted RBP15.59■□□□□ 0.09
LIMK2-202ENST00000333611 EXOC6Q8TAG9 804 aa15.59■□□□□ 0.09
LIMK2-202ENST00000333611 FRAT2O75474 233 aaPredicted RBP15.59■□□□□ 0.09
LIMK2-202ENST00000333611 DENND4BO75064 1496 aaPredicted RBP15.58■□□□□ 0.08
LIMK2-202ENST00000333611 DCAF11Q8TEB1 546 aa15.58■□□□□ 0.08
LIMK2-202ENST00000333611 CTTNBP2Q8WZ74 1663 aa15.57■□□□□ 0.08
LIMK2-202ENST00000333611 ANKRD30BQ9BXX2 1392 aa15.57■□□□□ 0.08
LIMK2-202ENST00000333611 ST20-MTHFSA0A0A6YYL1 179 aa15.57■□□□□ 0.08
LIMK2-202ENST00000333611 PLIN1O60240 522 aa15.56■□□□□ 0.08
LIMK2-202ENST00000333611 FAM43AQ8N2R8 423 aa15.55■□□□□ 0.08
LIMK2-202ENST00000333611 GZF1Q9H116 711 aaPredicted RBP15.55■□□□□ 0.08
LIMK2-202ENST00000333611 URB2Q14146 1524 aaKnown RBP15.55■□□□□ 0.08
LIMK2-202ENST00000333611 WASHC2CQ9Y4E1 1318 aa15.55■□□□□ 0.08
LIMK2-202ENST00000333611 UGGT2Q9NYU1 1516 aa15.55■□□□□ 0.08
LIMK2-202ENST00000333611 CC2D1BQ5T0F9 858 aaKnown RBP15.55■□□□□ 0.08
LIMK2-202ENST00000333611 CUL7Q14999 1698 aa15.55■□□□□ 0.08
LIMK2-202ENST00000333611 PDS5BQ9NTI5 1447 aa15.54■□□□□ 0.08
LIMK2-202ENST00000333611 RBM10P98175 930 aaKnown RBP15.54■□□□□ 0.08
LIMK2-202ENST00000333611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.085e-7■□□□□ 11
LIMK2-202ENST00000333611 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
LIMK2-202ENST00000333611 EPRSP07814 1512 aaKnown RBP15.54■□□□□ 0.08
LIMK2-202ENST00000333611 PNISRQ8TF01 805 aaKnown RBP15.52■□□□□ 0.08
LIMK2-202ENST00000333611 DDRGK1Q96HY6 314 aa15.51■□□□□ 0.07
LIMK2-202ENST00000333611 RCAN3Q9UKA8 241 aa15.51■□□□□ 0.07
LIMK2-202ENST00000333611 RPRD2Q5VT52 1461 aaKnown RBP15.51■□□□□ 0.07
LIMK2-202ENST00000333611 CDCA7LQ96GN5 454 aa15.51■□□□□ 0.07
LIMK2-202ENST00000333611 DAPK1P53355 1430 aa15.5■□□□□ 0.07
LIMK2-202ENST00000333611 THOC2Q8NI27 1593 aaKnown RBP15.5■□□□□ 0.07
LIMK2-202ENST00000333611 RRAGDQ9NQL2 400 aaPredicted RBP15.5■□□□□ 0.07
LIMK2-202ENST00000333611 SMG6Q86US8 1419 aaKnown RBP15.5■□□□□ 0.07
LIMK2-202ENST00000333611 LRRIQ1Q96JM4 1722 aa15.5■□□□□ 0.07
LIMK2-202ENST00000333611 NUP155O75694 1391 aa15.49■□□□□ 0.07
LIMK2-202ENST00000333611 SLKQ9H2G2 1235 aaPredicted RBP15.49■□□□□ 0.07
LIMK2-202ENST00000333611 ABCC5O15440 1437 aa15.49■□□□□ 0.07
LIMK2-202ENST00000333611 RRP1P56182 461 aaKnown RBP15.48■□□□□ 0.07
LIMK2-202ENST00000333611 TSPY4P0CV99 314 aa15.46■□□□□ 0.07
LIMK2-202ENST00000333611 TSPY10P0CW01 314 aa15.46■□□□□ 0.07
LIMK2-202ENST00000333611 DHX29Q7Z478 1369 aaKnown RBP15.46■□□□□ 0.06
LIMK2-202ENST00000333611 PRG4Q92954 1404 aaPredicted RBP15.45■□□□□ 0.06
LIMK2-202ENST00000333611 RGS3P49796 1198 aa15.45■□□□□ 0.06
LIMK2-202ENST00000333611 SPRYD3Q8NCJ5 442 aa15.45■□□□□ 0.06
LIMK2-202ENST00000333611 MIA2Q96PC5 1412 aa15.45■□□□□ 0.06
LIMK2-202ENST00000333611 HECW1Q76N89 1606 aa15.44■□□□□ 0.06
LIMK2-202ENST00000333611 POGKQ9P215 609 aa15.44■□□□□ 0.06
LIMK2-202ENST00000333611 TEX14Q8IWB6 1497 aa15.44■□□□□ 0.06
LIMK2-202ENST00000333611 PDE4CQ08493 712 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms