RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 CDC42BPBQ9Y5S2 1711 aa28.76■■■□□ 2.19
TSSC4-201ENST00000333256 ITSN2Q9NZM3 1697 aa28.74■■■□□ 2.19
TSSC4-201ENST00000333256 ZNF644Q9H582 1327 aaPredicted RBP28.73■■■□□ 2.19
TSSC4-201ENST00000333256 FANCAO15360 1455 aa28.73■■■□□ 2.19
TSSC4-201ENST00000333256 EFCAB2Q5VUJ9 269 aa28.73■■■□□ 2.19
TSSC4-201ENST00000333256 PPRC1Q5VV67 1664 aaKnown RBP28.72■■■□□ 2.19
TSSC4-201ENST00000333256 FGD6Q6ZV73 1430 aa28.72■■■□□ 2.19
TSSC4-201ENST00000333256 ARAP3Q8WWN8 1544 aa28.7■■■□□ 2.19
TSSC4-201ENST00000333256 MIA2Q96PC5 1412 aa28.68■■■□□ 2.18
TSSC4-201ENST00000333256 TEX14Q8IWB6 1497 aa28.66■■■□□ 2.18
TSSC4-201ENST00000333256 SAMD9LQ8IVG5 1584 aa28.65■■■□□ 2.18
TSSC4-201ENST00000333256 FAM50AQ14320 339 aaKnown RBP28.64■■■□□ 2.18
TSSC4-201ENST00000333256 AKNAQ7Z591 1439 aa28.64■■■□□ 2.18
TSSC4-201ENST00000333256 CAMSAP2Q08AD1 1489 aa28.63■■■□□ 2.17
TSSC4-201ENST00000333256 PTPN23Q9H3S7 1636 aa28.63■■■□□ 2.17
TSSC4-201ENST00000333256 NEO1Q92859 1461 aa28.62■■■□□ 2.17
TSSC4-201ENST00000333256 HNRNPMP52272 730 aaKnown RBP eCLIP28.6■■■□□ 2.17
TSSC4-201ENST00000333256 RRBP1Q9P2E9 1410 aaKnown RBP28.6■■■□□ 2.17
TSSC4-201ENST00000333256 ADGRL1O94910 1474 aa28.6■■■□□ 2.17
TSSC4-201ENST00000333256 CFAP74Q9C0B2 1584 aa28.59■■■□□ 2.17
TSSC4-201ENST00000333256 SCAPERQ9BY12 1400 aa28.57■■■□□ 2.16
TSSC4-201ENST00000333256 TCOF1Q13428 1488 aaKnown RBP28.57■■■□□ 2.16
TSSC4-201ENST00000333256 ARHGEF12Q9NZN5 1544 aa28.57■■■□□ 2.16
TSSC4-201ENST00000333256 ABCC1P33527 1531 aa28.56■■■□□ 2.16
TSSC4-201ENST00000333256 SYCP2Q9BX26 1530 aa28.56■■■□□ 2.16
TSSC4-201ENST00000333256 PLEKHH2Q8IVE3 1493 aa28.52■■■□□ 2.16
TSSC4-201ENST00000333256 KIAA1107Q9UPP5 1409 aa28.51■■■□□ 2.15
TSSC4-201ENST00000333256 RAPGEF3O95398 923 aa28.51■■■□□ 2.15
TSSC4-201ENST00000333256 MBD5Q9P267 1494 aa28.5■■■□□ 2.15
TSSC4-201ENST00000333256 TRAPPC8Q9Y2L5 1435 aa28.5■■■□□ 2.15
TSSC4-201ENST00000333256 ITGAEP38570 1179 aa28.5■■■□□ 2.15
TSSC4-201ENST00000333256 COL17A1Q9UMD9 1497 aaPredicted RBP28.5■■■□□ 2.15
TSSC4-201ENST00000333256 AFAP1Q8N556 730 aa28.49■■■□□ 2.15
TSSC4-201ENST00000333256 DENND4BO75064 1496 aaPredicted RBP28.47■■■□□ 2.15
TSSC4-201ENST00000333256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.45■■■□□ 2.14
TSSC4-201ENST00000333256 POGZQ7Z3K3 1410 aa28.44■■■□□ 2.14
TSSC4-201ENST00000333256 ABCC5O15440 1437 aa28.42■■■□□ 2.14
TSSC4-201ENST00000333256 CCDC141Q6ZP82 1450 aa28.42■■■□□ 2.14
TSSC4-201ENST00000333256 DAPK1P53355 1430 aa28.41■■■□□ 2.14
TSSC4-201ENST00000333256 ARHGEF5Q12774 1597 aa28.41■■■□□ 2.14
TSSC4-201ENST00000333256 ZNF518AQ6AHZ1 1483 aa28.41■■■□□ 2.14
TSSC4-201ENST00000333256 KDM6BO15054 1643 aa28.4■■■□□ 2.14
TSSC4-201ENST00000333256 DNMT1P26358 1616 aaKnown RBP28.4■■■□□ 2.14
TSSC4-201ENST00000333256 FRMPD1Q5SYB0 1578 aa28.39■■■□□ 2.14
TSSC4-201ENST00000333256 CHIC2Q9UKJ5 165 aa28.38■■■□□ 2.13
TSSC4-201ENST00000333256 PTPRKQ15262 1439 aa28.38■■■□□ 2.13
TSSC4-201ENST00000333256 RSPH4AQ5TD94 716 aa28.38■■■□□ 2.13
TSSC4-201ENST00000333256 TRIM26Q12899 539 aaPredicted RBP28.37■■■□□ 2.13
TSSC4-201ENST00000333256 RICTORQ6R327 1708 aa28.37■■■□□ 2.13
TSSC4-201ENST00000333256 TSPY4P0CV99 314 aa28.36■■■□□ 2.13
TSSC4-201ENST00000333256 TSPY10P0CW01 314 aa28.36■■■□□ 2.13
TSSC4-201ENST00000333256 MYT1LQ9UL68 1186 aa28.35■■■□□ 2.13
TSSC4-201ENST00000333256 SPAG9O60271 1321 aaKnown RBP28.35■■■□□ 2.13
TSSC4-201ENST00000333256 KDM5CP41229 1560 aa28.33■■■□□ 2.13
TSSC4-201ENST00000333256 C9orf84Q5VXU9 1444 aa28.32■■■□□ 2.12
TSSC4-201ENST00000333256 CROCC2H7BZ55 1655 aa28.3■■■□□ 2.12
TSSC4-201ENST00000333256 SHANK2Q9UPX8 1470 aa28.27■■■□□ 2.12
TSSC4-201ENST00000333256 ZFYVE16Q7Z3T8 1539 aa28.26■■■□□ 2.11
TSSC4-201ENST00000333256 ZMYM4Q5VZL5 1548 aa28.26■■■□□ 2.11
TSSC4-201ENST00000333256 HECW2Q9P2P5 1572 aa28.25■■■□□ 2.11
TSSC4-201ENST00000333256 ATP7AQ04656 1500 aa28.25■■■□□ 2.11
TSSC4-201ENST00000333256 MLH3Q9UHC1 1453 aa28.25■■■□□ 2.11
TSSC4-201ENST00000333256 YEATS2Q9ULM3 1422 aa28.24■■■□□ 2.11
TSSC4-201ENST00000333256 INO80Q9ULG1 1556 aaPredicted RBP28.24■■■□□ 2.11
TSSC4-201ENST00000333256 RRP7BPQ9NSQ0 103 aa28.23■■■□□ 2.11
TSSC4-201ENST00000333256 MAST1Q9Y2H9 1570 aa28.23■■■□□ 2.11
TSSC4-201ENST00000333256 RTEL1-TNFRSF6BF6WH68 1400 aa28.22■■■□□ 2.11
TSSC4-201ENST00000333256 KIDINS220Q9ULH0 1771 aa28.22■■■□□ 2.11
TSSC4-201ENST00000333256 NCOA1Q15788 1441 aa28.2■■■□□ 2.1
TSSC4-201ENST00000333256 PCGF6Q9BYE7 350 aa28.19■■■□□ 2.1
TSSC4-201ENST00000333256 ANKRD30AQ9BXX3 1397 aa28.19■■■□□ 2.1
TSSC4-201ENST00000333256 ADGRL2O95490 1459 aa28.18■■■□□ 2.1
TSSC4-201ENST00000333256 MAGI2Q86UL8 1455 aa28.17■■■□□ 2.1
TSSC4-201ENST00000333256 ABCA6Q8N139 1617 aa28.17■■■□□ 2.1
TSSC4-201ENST00000333256 ROCK1Q13464 1354 aa28.16■■■□□ 2.1
TSSC4-201ENST00000333256 KIF15Q9NS87 1388 aa28.16■■■□□ 2.1
TSSC4-201ENST00000333256 ADGBQ8N7X0 1667 aa28.15■■■□□ 2.1
TSSC4-201ENST00000333256 DIP2CQ9Y2E4 1556 aa28.14■■■□□ 2.09
TSSC4-201ENST00000333256 PLXNC1O60486 1568 aa28.13■■■□□ 2.09
TSSC4-201ENST00000333256 ARHGEF40Q8TER5 1519 aa28.12■■■□□ 2.09
TSSC4-201ENST00000333256 ATP10AO60312 1499 aa28.08■■■□□ 2.09
TSSC4-201ENST00000333256 HFM1A2PYH4 1435 aa28.07■■■□□ 2.08
TSSC4-201ENST00000333256 NAIPQ13075 1403 aa28.07■■■□□ 2.08
TSSC4-201ENST00000333256 A2MP01023 1474 aa28.07■■■□□ 2.08
TSSC4-201ENST00000333256 DHX29Q7Z478 1369 aaKnown RBP28.05■■■□□ 2.08
TSSC4-201ENST00000333256 DUOX2Q9NRD8 1548 aa28.05■■■□□ 2.08
TSSC4-201ENST00000333256 ANKRD50Q9ULJ7 1429 aa28.03■■■□□ 2.08
TSSC4-201ENST00000333256 GCC2Q8IWJ2 1684 aa27.99■■■□□ 2.07
TSSC4-201ENST00000333256 SETD5Q9C0A6 1442 aa27.99■■■□□ 2.07
TSSC4-201ENST00000333256 SIGLEC1Q9BZZ2 1709 aa27.98■■■□□ 2.07
TSSC4-201ENST00000333256 KIF3BO15066 747 aa27.97■■■□□ 2.07
TSSC4-201ENST00000333256 ERBINQ96RT1 1412 aa27.97■■■□□ 2.07
TSSC4-201ENST00000333256 ARID4BQ4LE39 1312 aaPredicted RBP27.97■■■□□ 2.07
TSSC4-201ENST00000333256 REREQ9P2R6 1566 aa27.94■■■□□ 2.06
TSSC4-201ENST00000333256 RAB3GAP2Q9H2M9 1393 aa27.94■■■□□ 2.06
TSSC4-201ENST00000333256 MLECQ14165 292 aa27.91■■■□□ 2.06
TSSC4-201ENST00000333256 GGT6Q6P531 493 aa27.9■■■□□ 2.06
TSSC4-201ENST00000333256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.89■■■□□ 2.06
TSSC4-201ENST00000333256 AGLP35573 1532 aa27.88■■■□□ 2.05
TSSC4-201ENST00000333256 EIF2AK4Q9P2K8 1649 aaKnown RBP27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms