RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 MYO5CQ9NQX4 1742 aa32.39■■■□□ 2.78
YBX1-201ENST00000321358 FANCAO15360 1455 aa32.38■■■□□ 2.77
YBX1-201ENST00000321358 ITSN2Q9NZM3 1697 aa32.36■■■□□ 2.77
YBX1-201ENST00000321358 PREX2Q70Z35 1606 aa32.35■■■□□ 2.77
YBX1-201ENST00000321358 FGD6Q6ZV73 1430 aa32.34■■■□□ 2.77
YBX1-201ENST00000321358 CDC42BPAQ5VT25 1732 aa32.33■■■□□ 2.77
YBX1-201ENST00000321358 NEO1Q92859 1461 aa32.31■■■□□ 2.76
YBX1-201ENST00000321358 FAM50AQ14320 339 aaKnown RBP32.3■■■□□ 2.76
YBX1-201ENST00000321358 AKNAQ7Z591 1439 aa32.29■■■□□ 2.76
YBX1-201ENST00000321358 ZNF644Q9H582 1327 aaPredicted RBP32.29■■■□□ 2.76
YBX1-201ENST00000321358 TSPOAP1O95153 1857 aa32.28■■■□□ 2.76
YBX1-201ENST00000321358 CDC42BPBQ9Y5S2 1711 aa32.27■■■□□ 2.76
YBX1-201ENST00000321358 CFAP74Q9C0B2 1584 aa32.26■■■□□ 2.76
YBX1-201ENST00000321358 PLEKHH2Q8IVE3 1493 aa32.25■■■□□ 2.75
YBX1-201ENST00000321358 ADGRL1O94910 1474 aa32.22■■■□□ 2.75
YBX1-201ENST00000321358 CAMSAP2Q08AD1 1489 aa32.21■■■□□ 2.75
YBX1-201ENST00000321358 RRBP1Q9P2E9 1410 aaKnown RBP32.2■■■□□ 2.75
YBX1-201ENST00000321358 KIAA1107Q9UPP5 1409 aa32.2■■■□□ 2.75
YBX1-201ENST00000321358 HNRNPMP52272 730 aaKnown RBP eCLIP32.2■■■□□ 2.749e-7■■■■□ 23.6
YBX1-201ENST00000321358 RSPH4AQ5TD94 716 aa32.2■■■□□ 2.74
YBX1-201ENST00000321358 SCAPERQ9BY12 1400 aa32.2■■■□□ 2.74
YBX1-201ENST00000321358 PPRC1Q5VV67 1664 aaKnown RBP32.19■■■□□ 2.74
YBX1-201ENST00000321358 PTPN23Q9H3S7 1636 aa32.19■■■□□ 2.74
YBX1-201ENST00000321358 TCOF1Q13428 1488 aaKnown RBP32.17■■■□□ 2.74
YBX1-201ENST00000321358 SAMD9LQ8IVG5 1584 aa32.16■■■□□ 2.74
YBX1-201ENST00000321358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.16■■■□□ 2.74
YBX1-201ENST00000321358 DENND4BO75064 1496 aaPredicted RBP32.12■■■□□ 2.73
YBX1-201ENST00000321358 ABCC1P33527 1531 aa32.12■■■□□ 2.73
YBX1-201ENST00000321358 KDM6BO15054 1643 aa32.12■■■□□ 2.73
YBX1-201ENST00000321358 TSPY4P0CV99 314 aa32.1■■■□□ 2.73
YBX1-201ENST00000321358 TSPY10P0CW01 314 aa32.1■■■□□ 2.73
YBX1-201ENST00000321358 SYCP2Q9BX26 1530 aa32.1■■■□□ 2.73
YBX1-201ENST00000321358 RAPGEF3O95398 923 aa32.09■■■□□ 2.73
YBX1-201ENST00000321358 AFAP1Q8N556 730 aa32.08■■■□□ 2.73
YBX1-201ENST00000321358 MBD5Q9P267 1494 aa32.07■■■□□ 2.72
YBX1-201ENST00000321358 ITGAEP38570 1179 aa32.07■■■□□ 2.72
YBX1-201ENST00000321358 ARHGEF12Q9NZN5 1544 aa32.06■■■□□ 2.72
YBX1-201ENST00000321358 ZNF518AQ6AHZ1 1483 aa32.05■■■□□ 2.72
YBX1-201ENST00000321358 TRAPPC8Q9Y2L5 1435 aa32.05■■■□□ 2.72
YBX1-201ENST00000321358 TRIM26Q12899 539 aaPredicted RBP32.05■■■□□ 2.72
YBX1-201ENST00000321358 MYT1LQ9UL68 1186 aa32.05■■■□□ 2.72
YBX1-201ENST00000321358 POGZQ7Z3K3 1410 aa32.04■■■□□ 2.72
YBX1-201ENST00000321358 CCDC141Q6ZP82 1450 aa32.04■■■□□ 2.72
YBX1-201ENST00000321358 SPAG9O60271 1321 aaKnown RBP32.01■■■□□ 2.72
YBX1-201ENST00000321358 ARHGEF5Q12774 1597 aa32■■■□□ 2.71
YBX1-201ENST00000321358 DAPK1P53355 1430 aa31.99■■■□□ 2.71
YBX1-201ENST00000321358 ABCC5O15440 1437 aa31.99■■■□□ 2.71
YBX1-201ENST00000321358 COL17A1Q9UMD9 1497 aaPredicted RBP31.99■■■□□ 2.71
YBX1-201ENST00000321358 CHIC2Q9UKJ5 165 aa31.95■■■□□ 2.7
YBX1-201ENST00000321358 DNMT1P26358 1616 aaKnown RBP31.93■■■□□ 2.7
YBX1-201ENST00000321358 C9orf84Q5VXU9 1444 aa31.91■■■□□ 2.7
YBX1-201ENST00000321358 SHANK2Q9UPX8 1470 aa31.89■■■□□ 2.69
YBX1-201ENST00000321358 RTEL1-TNFRSF6BF6WH68 1400 aa31.88■■■□□ 2.69
YBX1-201ENST00000321358 KDM5CP41229 1560 aa31.87■■■□□ 2.69
YBX1-201ENST00000321358 MLH3Q9UHC1 1453 aa31.86■■■□□ 2.69
YBX1-201ENST00000321358 MAGI2Q86UL8 1455 aa31.86■■■□□ 2.69
YBX1-201ENST00000321358 RICTORQ6R327 1708 aa31.86■■■□□ 2.69
YBX1-201ENST00000321358 ANKRD30AQ9BXX3 1397 aa31.86■■■□□ 2.69
YBX1-201ENST00000321358 PTPRKQ15262 1439 aa31.84■■■□□ 2.69
YBX1-201ENST00000321358 FRMPD1Q5SYB0 1578 aa31.83■■■□□ 2.69
YBX1-201ENST00000321358 ZMYM4Q5VZL5 1548 aa31.82■■■□□ 2.68
YBX1-201ENST00000321358 RRP7BPQ9NSQ0 103 aa31.81■■■□□ 2.68
YBX1-201ENST00000321358 ROCK1Q13464 1354 aa31.8■■■□□ 2.68
YBX1-201ENST00000321358 ATP7AQ04656 1500 aa31.8■■■□□ 2.68
YBX1-201ENST00000321358 HECW2Q9P2P5 1572 aa31.8■■■□□ 2.68
YBX1-201ENST00000321358 MAST1Q9Y2H9 1570 aa31.79■■■□□ 2.68
YBX1-201ENST00000321358 NCOA1Q15788 1441 aa31.77■■■□□ 2.68
YBX1-201ENST00000321358 CROCC2H7BZ55 1655 aa31.77■■■□□ 2.68
YBX1-201ENST00000321358 ZFYVE16Q7Z3T8 1539 aa31.76■■■□□ 2.68
YBX1-201ENST00000321358 ADGRL2O95490 1459 aa31.75■■■□□ 2.67
YBX1-201ENST00000321358 KIF15Q9NS87 1388 aa31.75■■■□□ 2.67
YBX1-201ENST00000321358 INO80Q9ULG1 1556 aaPredicted RBP31.74■■■□□ 2.67
YBX1-201ENST00000321358 YEATS2Q9ULM3 1422 aa31.73■■■□□ 2.67
YBX1-201ENST00000321358 AEBP2Q6ZN18 517 aaPredicted RBP31.73■■■□□ 2.67
YBX1-201ENST00000321358 PCGF6Q9BYE7 350 aa31.72■■■□□ 2.67
YBX1-201ENST00000321358 KIDINS220Q9ULH0 1771 aa31.69■■■□□ 2.66
YBX1-201ENST00000321358 ATP10AO60312 1499 aa31.68■■■□□ 2.66
YBX1-201ENST00000321358 DHX29Q7Z478 1369 aaKnown RBP31.66■■■□□ 2.66
YBX1-201ENST00000321358 PLXNC1O60486 1568 aa31.66■■■□□ 2.66
YBX1-201ENST00000321358 ADGBQ8N7X0 1667 aa31.65■■■□□ 2.66
YBX1-201ENST00000321358 A2MP01023 1474 aa31.65■■■□□ 2.66
YBX1-201ENST00000321358 HFM1A2PYH4 1435 aa31.64■■■□□ 2.66
YBX1-201ENST00000321358 ARHGEF40Q8TER5 1519 aa31.63■■■□□ 2.65
YBX1-201ENST00000321358 DUOX2Q9NRD8 1548 aa31.62■■■□□ 2.65
YBX1-201ENST00000321358 DIP2CQ9Y2E4 1556 aa31.62■■■□□ 2.65
YBX1-201ENST00000321358 ABCA6Q8N139 1617 aa31.61■■■□□ 2.65
YBX1-201ENST00000321358 NAIPQ13075 1403 aa31.61■■■□□ 2.65
YBX1-201ENST00000321358 ANKRD50Q9ULJ7 1429 aa31.61■■■□□ 2.65
YBX1-201ENST00000321358 ARID4BQ4LE39 1312 aaPredicted RBP31.59■■■□□ 2.65
YBX1-201ENST00000321358 ERBINQ96RT1 1412 aa31.57■■■□□ 2.64
YBX1-201ENST00000321358 SETD5Q9C0A6 1442 aa31.57■■■□□ 2.64
YBX1-201ENST00000321358 KDM4FA0A1W2PPD8 638 aa31.56■■■□□ 2.64
YBX1-201ENST00000321358 KIF3BO15066 747 aa31.55■■■□□ 2.64
YBX1-201ENST00000321358 REREQ9P2R6 1566 aa31.51■■■□□ 2.63
YBX1-201ENST00000321358 ACIN1Q9UKV3 1341 aaKnown RBP31.5■■■□□ 2.63
YBX1-201ENST00000321358 GGT6Q6P531 493 aa31.46■■■□□ 2.63
YBX1-201ENST00000321358 AGLP35573 1532 aa31.46■■■□□ 2.63
YBX1-201ENST00000321358 RAB3GAP2Q9H2M9 1393 aa31.45■■■□□ 2.63
YBX1-201ENST00000321358 HRCP23327 699 aa31.44■■■□□ 2.62
YBX1-201ENST00000321358 GCC2Q8IWJ2 1684 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms