RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 TNIKQ9UKE5 1360 aa5.41□□□□□ -1.54
SCAMP1-201ENST00000320280 PYGBP11216 843 aa5.4□□□□□ -1.54
SCAMP1-201ENST00000320280 KIAA0556O60303 1618 aa5.4□□□□□ -1.54
SCAMP1-201ENST00000320280 PCDHB13Q9Y5F0 798 aa5.39□□□□□ -1.55
SCAMP1-201ENST00000320280 CARMIL2Q6F5E8 1435 aa5.39□□□□□ -1.55
SCAMP1-201ENST00000320280 PELP1Q8IZL8 1130 aaKnown RBP5.38□□□□□ -1.55
SCAMP1-201ENST00000320280 UHRF1BP1LA0JNW5 1464 aa5.38□□□□□ -1.55
SCAMP1-201ENST00000320280 CIZ1Q9ULV3 898 aaPredicted RBP5.38□□□□□ -1.55
SCAMP1-201ENST00000320280 MAP3K1Q13233 1512 aa5.37□□□□□ -1.55
SCAMP1-201ENST00000320280 CHMP7Q8WUX9 453 aaPredicted RBP5.36□□□□□ -1.55
SCAMP1-201ENST00000320280 FAM212AQ96EL1 285 aa5.36□□□□□ -1.55
SCAMP1-201ENST00000320280 CCDC61Q9Y6R9 512 aa5.36□□□□□ -1.55
SCAMP1-201ENST00000320280 METRNQ9UJH8 293 aa5.35□□□□□ -1.55
SCAMP1-201ENST00000320280 HECW1Q76N89 1606 aa5.35□□□□□ -1.55
SCAMP1-201ENST00000320280 DISP1Q96F81 1524 aa5.35□□□□□ -1.55
SCAMP1-201ENST00000320280 SEC24BO95487 1268 aa5.35□□□□□ -1.55
SCAMP1-201ENST00000320280 PROM2Q8N271 834 aa5.35□□□□□ -1.55
SCAMP1-201ENST00000320280 FMN1Q68DA7 1419 aa5.35□□□□□ -1.55
SCAMP1-201ENST00000320280 DNAJC5Q9H3Z4 198 aa5.34□□□□□ -1.55
SCAMP1-201ENST00000320280 ABCA8O94911 1581 aa5.34□□□□□ -1.55
SCAMP1-201ENST00000320280 RIMBP3CA6NJZ7 1639 aa5.34□□□□□ -1.55
SCAMP1-201ENST00000320280 RIMBP3BA6NNM3 1639 aa5.34□□□□□ -1.55
SCAMP1-201ENST00000320280 RIMBP3Q9UFD9 1639 aa5.34□□□□□ -1.55
SCAMP1-201ENST00000320280 POTEB2H3BUK9 544 aa5.34□□□□□ -1.55
SCAMP1-201ENST00000320280 ATN1P54259 1190 aaPredicted RBP5.34□□□□□ -1.55
SCAMP1-201ENST00000320280 CFAP43Q8NDM7 1665 aa5.34□□□□□ -1.55
SCAMP1-201ENST00000320280 RAPGEF6Q8TEU7 1601 aa5.34□□□□□ -1.56
SCAMP1-201ENST00000320280 CCDC18Q5T9S5 1454 aa5.34□□□□□ -1.56
SCAMP1-201ENST00000320280 PCDHB8Q9UN66 801 aa5.34□□□□□ -1.56
SCAMP1-201ENST00000320280 FYCO1Q9BQS8 1478 aa5.33□□□□□ -1.56
SCAMP1-201ENST00000320280 VASPP50552 380 aaPredicted RBP5.33□□□□□ -1.56
SCAMP1-201ENST00000320280 KIF12Q96FN5 646 aa5.33□□□□□ -1.56
SCAMP1-201ENST00000320280 FAM9AQ8IZU1 332 aaPredicted RBP5.33□□□□□ -1.56
SCAMP1-201ENST00000320280 FBXO3Q9UK99 471 aa5.33□□□□□ -1.56
SCAMP1-201ENST00000320280 ARHGEF11O15085 1522 aa5.33□□□□□ -1.56
SCAMP1-201ENST00000320280 ZBTB47Q9UFB7 747 aaPredicted RBP5.33□□□□□ -1.56
SCAMP1-201ENST00000320280 ABCC2Q92887 1545 aa5.33□□□□□ -1.56
SCAMP1-201ENST00000320280 ADCY10Q96PN6 1610 aa5.32□□□□□ -1.56
SCAMP1-201ENST00000320280 PLSCR2Q9NRY7 297 aa5.32□□□□□ -1.56
SCAMP1-201ENST00000320280 TRIM35Q9UPQ4 493 aa5.32□□□□□ -1.56
SCAMP1-201ENST00000320280 MAPKBP1O60336 1514 aa5.31□□□□□ -1.56
SCAMP1-201ENST00000320280 IFNL1Q8IU54 200 aa5.31□□□□□ -1.56
SCAMP1-201ENST00000320280 ARHGAP35Q9NRY4 1499 aa5.31□□□□□ -1.56
SCAMP1-201ENST00000320280 CASKIN1Q8WXD9 1431 aa5.3□□□□□ -1.56
SCAMP1-201ENST00000320280 PRG4Q92954 1404 aaPredicted RBP5.3□□□□□ -1.56
SCAMP1-201ENST00000320280 TMEM106CQ9BVX2 250 aa5.3□□□□□ -1.56
SCAMP1-201ENST00000320280 BMP2KQ9NSY1 1161 aaPredicted RBP5.3□□□□□ -1.56
SCAMP1-201ENST00000320280 CLIP1P30622 1438 aa5.3□□□□□ -1.56
SCAMP1-201ENST00000320280 CEP162Q5TB80 1403 aa5.3□□□□□ -1.56
SCAMP1-201ENST00000320280 ATMINO43313 823 aaPredicted RBP5.3□□□□□ -1.56
SCAMP1-201ENST00000320280 KDM5BQ9UGL1 1544 aa5.29□□□□□ -1.56
SCAMP1-201ENST00000320280 GLI2P10070 1586 aa5.29□□□□□ -1.56
SCAMP1-201ENST00000320280 ARAP3Q8WWN8 1544 aa5.29□□□□□ -1.56
SCAMP1-201ENST00000320280 NUBP1P53384 320 aa5.29□□□□□ -1.56
SCAMP1-201ENST00000320280 CFAP74Q9C0B2 1584 aa5.29□□□□□ -1.56
SCAMP1-201ENST00000320280 ARAP1Q96P48 1450 aa5.29□□□□□ -1.56
SCAMP1-201ENST00000320280 VPS8Q8N3P4 1428 aa5.28□□□□□ -1.56
SCAMP1-201ENST00000320280 FAM163AQ96GL9 167 aaPredicted RBP5.28□□□□□ -1.56
SCAMP1-201ENST00000320280 JPH4Q96JJ6 628 aa5.28□□□□□ -1.56
SCAMP1-201ENST00000320280 UACAQ9BZF9 1416 aa5.28□□□□□ -1.56
SCAMP1-201ENST00000320280 ZCCHC11Q5TAX3 1644 aaKnown RBP5.28□□□□□ -1.56
SCAMP1-201ENST00000320280 TTLL13PA6NNM8 815 aa5.28□□□□□ -1.56
SCAMP1-201ENST00000320280 PCF11O94913 1555 aaKnown RBP5.27□□□□□ -1.57
SCAMP1-201ENST00000320280 GOLGA2Q08379 1002 aa5.27□□□□□ -1.57
SCAMP1-201ENST00000320280 COLQQ9Y215 455 aaPredicted RBP5.27□□□□□ -1.57
SCAMP1-201ENST00000320280 EHBP1L1Q8N3D4 1523 aa5.27□□□□□ -1.57
SCAMP1-201ENST00000320280 ITSN2Q9NZM3 1697 aa5.27□□□□□ -1.57
SCAMP1-201ENST00000320280 OTUD5Q96G74 571 aa5.27□□□□□ -1.57
SCAMP1-201ENST00000320280 PTPRGP23470 1445 aa5.26□□□□□ -1.57
SCAMP1-201ENST00000320280 LRRIQ1Q96JM4 1722 aa5.26□□□□□ -1.57
SCAMP1-201ENST00000320280 PLB1Q6P1J6 1458 aa5.26□□□□□ -1.57
SCAMP1-201ENST00000320280 TIAM1Q13009 1591 aa5.26□□□□□ -1.57
SCAMP1-201ENST00000320280 IFNLR1Q8IU57 520 aaPredicted RBP5.25□□□□□ -1.57
SCAMP1-201ENST00000320280 SUPT6HQ7KZ85 1726 aaKnown RBP5.25□□□□□ -1.57
SCAMP1-201ENST00000320280 ERCC6L2Q5T890 1561 aa5.25□□□□□ -1.57
SCAMP1-201ENST00000320280 ABCA9Q8IUA7 1624 aa5.25□□□□□ -1.57
SCAMP1-201ENST00000320280 SLC39A7Q92504 469 aa5.25□□□□□ -1.57
SCAMP1-201ENST00000320280 KIF14Q15058 1648 aa5.24□□□□□ -1.57
SCAMP1-201ENST00000320280 ASTLQ6HA08 431 aaPredicted RBP5.24□□□□□ -1.57
SCAMP1-201ENST00000320280 EPRSP07814 1512 aaKnown RBP5.24□□□□□ -1.57
SCAMP1-201ENST00000320280 NUP153P49790 1475 aaKnown RBP5.24□□□□□ -1.57
SCAMP1-201ENST00000320280 MAP3K4Q9Y6R4 1608 aa5.24□□□□□ -1.57
SCAMP1-201ENST00000320280 UBTFP17480 764 aaKnown RBP5.24□□□□□ -1.57
SCAMP1-201ENST00000320280 CLCN6P51797 869 aa5.24□□□□□ -1.57
SCAMP1-201ENST00000320280 MYO5CQ9NQX4 1742 aa5.23□□□□□ -1.57
SCAMP1-201ENST00000320280 C7P10643 843 aa5.23□□□□□ -1.57
SCAMP1-201ENST00000320280 PHLDB1Q86UU1 1377 aa5.23□□□□□ -1.57
SCAMP1-201ENST00000320280 FHOD3Q2V2M9 1422 aa5.22□□□□□ -1.57
SCAMP1-201ENST00000320280 POTEJP0CG39 1038 aa5.22□□□□□ -1.57
SCAMP1-201ENST00000320280 PLCG2P16885 1265 aa5.22□□□□□ -1.57
SCAMP1-201ENST00000320280 SCUBE2Q9NQ36 999 aa5.22□□□□□ -1.57
SCAMP1-201ENST00000320280 PREX2Q70Z35 1606 aa5.22□□□□□ -1.57
SCAMP1-201ENST00000320280 WDR7Q9Y4E6 1490 aa5.22□□□□□ -1.57
SCAMP1-201ENST00000320280 DIP2BQ9P265 1576 aa5.21□□□□□ -1.57
SCAMP1-201ENST00000320280 KIF13AQ9H1H9 1805 aa5.21□□□□□ -1.58
SCAMP1-201ENST00000320280 TROQ12816 1431 aaPredicted RBP5.21□□□□□ -1.58
SCAMP1-201ENST00000320280 ATP10BO94823 1461 aa5.2□□□□□ -1.58
SCAMP1-201ENST00000320280 MAGI3Q5TCQ9 1506 aa5.2□□□□□ -1.58
SCAMP1-201ENST00000320280 TIE1P35590 1138 aa5.2□□□□□ -1.58
SCAMP1-201ENST00000320280 CDK11AQ9UQ88 783 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms