RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 A0A0G2JS52 829 aa21.48■■□□□ 1.03
CLIP4-201ENST00000320081 RCAN3Q9UKA8 241 aa21.47■■□□□ 1.03
CLIP4-201ENST00000320081 RAD54L2Q9Y4B4 1467 aa21.47■■□□□ 1.03
CLIP4-201ENST00000320081 ROCK2O75116 1388 aaKnown RBP21.47■■□□□ 1.03
CLIP4-201ENST00000320081 PRKRIP1Q9H875 184 aaPredicted RBP21.45■■□□□ 1.02
CLIP4-201ENST00000320081 JPH4Q96JJ6 628 aa21.45■■□□□ 1.02
CLIP4-201ENST00000320081 SRPK2P78362 688 aaKnown RBP21.44■■□□□ 1.02
CLIP4-201ENST00000320081 CLUAP1Q96AJ1 413 aa21.43■■□□□ 1.02
CLIP4-201ENST00000320081 MAPK8IP3Q9UPT6 1336 aa21.42■■□□□ 1.02
CLIP4-201ENST00000320081 KIF3BO15066 747 aa21.41■■□□□ 1.02
CLIP4-201ENST00000320081 LMOD2Q6P5Q4 547 aa21.41■■□□□ 1.02
CLIP4-201ENST00000320081 MORC1Q86VD1 984 aa21.41■■□□□ 1.02
CLIP4-201ENST00000320081 DEKP35659 375 aaKnown RBP21.41■■□□□ 1.02
CLIP4-201ENST00000320081 MYH16Q9H6N6 1097 aa21.4■■□□□ 1.02
CLIP4-201ENST00000320081 ANP32BQ92688 251 aaKnown RBP21.39■■□□□ 1.01
CLIP4-201ENST00000320081 ARAP1Q96P48 1450 aa21.38■■□□□ 1.01
CLIP4-201ENST00000320081 KIF21BO75037 1637 aa21.37■■□□□ 1.01
CLIP4-201ENST00000320081 APBB1O00213 710 aa21.37■■□□□ 1.01
CLIP4-201ENST00000320081 RRP7AQ9Y3A4 280 aaKnown RBP21.37■■□□□ 1.01
CLIP4-201ENST00000320081 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
CLIP4-201ENST00000320081 NCLP19338 710 aaKnown RBP21.36■■□□□ 1.01
CLIP4-201ENST00000320081 KTN1Q86UP2 1357 aaKnown RBP21.36■■□□□ 1.01
CLIP4-201ENST00000320081 DDRGK1Q96HY6 314 aa21.35■■□□□ 1.01
CLIP4-201ENST00000320081 NUDCQ9Y266 331 aa21.35■■□□□ 1.01
CLIP4-201ENST00000320081 U2AF1L5P0DN76 240 aaPredicted RBP21.35■■□□□ 1.01
CLIP4-201ENST00000320081 U2AF1Q01081 240 aaKnown RBP eCLIP21.35■■□□□ 1.01
CLIP4-201ENST00000320081 BCL2L13Q9BXK5 485 aa21.35■■□□□ 1.01
CLIP4-201ENST00000320081 SLC4A3P48751 1232 aa21.34■■□□□ 1.01
CLIP4-201ENST00000320081 BECN1Q14457 450 aa21.34■■□□□ 1.01
CLIP4-201ENST00000320081 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
CLIP4-201ENST00000320081 SLKQ9H2G2 1235 aaPredicted RBP21.33■■□□□ 1.01
CLIP4-201ENST00000320081 ANKRD30AQ9BXX3 1397 aa21.33■■□□□ 1
CLIP4-201ENST00000320081 PANK3Q9H999 370 aa21.32■■□□□ 1
CLIP4-201ENST00000320081 NUTM2FA1L443 756 aa21.32■■□□□ 1
CLIP4-201ENST00000320081 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
CLIP4-201ENST00000320081 CCDC18Q5T9S5 1454 aa21.31■■□□□ 1
CLIP4-201ENST00000320081 TRAK1Q9UPV9 953 aa21.31■■□□□ 1
CLIP4-201ENST00000320081 EXOC6Q8TAG9 804 aa21.3■■□□□ 1
CLIP4-201ENST00000320081 CCDC184Q52MB2 194 aa21.3■■□□□ 1
CLIP4-201ENST00000320081 TAOK2Q9UL54 1235 aa21.29■■□□□ 1
CLIP4-201ENST00000320081 NLRP13Q86W25 1043 aa21.27■■□□□ 1
CLIP4-201ENST00000320081 WASHC2AQ641Q2 1341 aa21.27■■□□□ 1
CLIP4-201ENST00000320081 EFCAB2Q5VUJ9 269 aa21.27■■□□□ 1
CLIP4-201ENST00000320081 SYNJ1O43426 1573 aa21.26■□□□□ 0.99
CLIP4-201ENST00000320081 DNAJC5BQ9UF47 199 aa21.25■□□□□ 0.99
CLIP4-201ENST00000320081 CARMIL2Q6F5E8 1435 aa21.24■□□□□ 0.99
CLIP4-201ENST00000320081 RALBP1Q15311 655 aa21.23■□□□□ 0.99
CLIP4-201ENST00000320081 KIF7Q2M1P5 1343 aa21.22■□□□□ 0.99
CLIP4-201ENST00000320081 USP47Q96K76 1375 aa21.22■□□□□ 0.99
CLIP4-201ENST00000320081 GZF1Q9H116 711 aaPredicted RBP21.21■□□□□ 0.99
CLIP4-201ENST00000320081 ELL2O00472 640 aaPredicted RBP21.2■□□□□ 0.98
CLIP4-201ENST00000320081 AQRO60306 1485 aaKnown RBP eCLIP21.19■□□□□ 0.98
CLIP4-201ENST00000320081 FGD6Q6ZV73 1430 aa21.19■□□□□ 0.98
CLIP4-201ENST00000320081 GOLGA2Q08379 1002 aa21.17■□□□□ 0.98
CLIP4-201ENST00000320081 SPAG9O60271 1321 aaKnown RBP21.17■□□□□ 0.98
CLIP4-201ENST00000320081 NBPF8Q3BBV2 869 aa21.17■□□□□ 0.98
CLIP4-201ENST00000320081 APAF1O14727 1248 aa21.15■□□□□ 0.98
CLIP4-201ENST00000320081 KANK1Q14678 1352 aa21.15■□□□□ 0.98
CLIP4-201ENST00000320081 ITPRIPQ8IWB1 547 aa21.15■□□□□ 0.98
CLIP4-201ENST00000320081 LRRC9Q6ZRR7 1453 aa21.15■□□□□ 0.98
CLIP4-201ENST00000320081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.15■□□□□ 0.98
CLIP4-201ENST00000320081 CDCA7LQ96GN5 454 aa21.13■□□□□ 0.97
CLIP4-201ENST00000320081 CRBNQ96SW2 442 aa21.13■□□□□ 0.97
CLIP4-201ENST00000320081 NESP48681 1621 aa21.13■□□□□ 0.97
CLIP4-201ENST00000320081 TCERG1O14776 1098 aaKnown RBP21.12■□□□□ 0.97
CLIP4-201ENST00000320081 TRIM44Q96DX7 344 aaPredicted RBP21.12■□□□□ 0.97
CLIP4-201ENST00000320081 IPO9Q96P70 1041 aaKnown RBP21.11■□□□□ 0.97
CLIP4-201ENST00000320081 HSP90AB1P08238 724 aaKnown RBP21.1■□□□□ 0.97
CLIP4-201ENST00000320081 ZBED9Q6R2W3 1325 aa21.1■□□□□ 0.97
CLIP4-201ENST00000320081 PLCB2Q00722 1185 aa21.1■□□□□ 0.97
CLIP4-201ENST00000320081 MYBBP1AQ9BQG0 1328 aaKnown RBP21.1■□□□□ 0.97
CLIP4-201ENST00000320081 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
CLIP4-201ENST00000320081 NBPF1Q3BBV0 1214 aa21.09■□□□□ 0.97
CLIP4-201ENST00000320081 FOXD4L1Q9NU39 408 aa21.09■□□□□ 0.97
CLIP4-201ENST00000320081 COG6Q9Y2V7 657 aa21.09■□□□□ 0.97
CLIP4-201ENST00000320081 CCDC7Q96M83 1385 aa21.08■□□□□ 0.97
CLIP4-201ENST00000320081 SMC4Q9NTJ3 1288 aa21.08■□□□□ 0.96
CLIP4-201ENST00000320081 WASHC2CQ9Y4E1 1318 aa21.08■□□□□ 0.96
CLIP4-201ENST00000320081 CCDC144AA2RUR9 1427 aa21.08■□□□□ 0.96
CLIP4-201ENST00000320081 MFAP1P55081 439 aaKnown RBP21.07■□□□□ 0.96
CLIP4-201ENST00000320081 CFTRP13569 1480 aa21.07■□□□□ 0.96
CLIP4-201ENST00000320081 PDE4AP27815 886 aa21.06■□□□□ 0.96
CLIP4-201ENST00000320081 RRP1P56182 461 aaKnown RBP21.06■□□□□ 0.96
CLIP4-201ENST00000320081 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.06■□□□□ 0.96
CLIP4-201ENST00000320081 MYOM3Q5VTT5 1437 aa21.05■□□□□ 0.96
CLIP4-201ENST00000320081 ERICH6BQ5W0A0 696 aa21.04■□□□□ 0.96
CLIP4-201ENST00000320081 PAK3O75914 559 aaPredicted RBP21.03■□□□□ 0.96
CLIP4-201ENST00000320081 KIF15Q9NS87 1388 aa21.03■□□□□ 0.96
CLIP4-201ENST00000320081 GOLGA6L22H0YM25 854 aa21.03■□□□□ 0.96
CLIP4-201ENST00000320081 AFAP1Q8N556 730 aa21.02■□□□□ 0.96
CLIP4-201ENST00000320081 UACAQ9BZF9 1416 aa21.02■□□□□ 0.96
CLIP4-201ENST00000320081 PTPRGP23470 1445 aa21.01■□□□□ 0.95
CLIP4-201ENST00000320081 C11orf95C9JLR9 678 aaPredicted RBP21.01■□□□□ 0.95
CLIP4-201ENST00000320081 NCOA2Q15596 1464 aa21.01■□□□□ 0.95
CLIP4-201ENST00000320081 HAP1P54257 671 aaPredicted RBP21.01■□□□□ 0.95
CLIP4-201ENST00000320081 TMEM132EQ6IEE7 984 aa21.01■□□□□ 0.95
CLIP4-201ENST00000320081 TRHP20396 242 aaPredicted RBP21■□□□□ 0.95
CLIP4-201ENST00000320081 CENPJQ9HC77 1338 aaPredicted RBP21■□□□□ 0.95
CLIP4-201ENST00000320081 OS9Q13438 667 aaPredicted RBP21■□□□□ 0.95
CLIP4-201ENST00000320081 PRXQ9BXM0 1461 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms