RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 PREX2Q70Z35 1606 aa23.73■■□□□ 1.39
HNF4A-202ENST00000316673 NEO1Q92859 1461 aa23.73■■□□□ 1.39
HNF4A-202ENST00000316673 CDC42BPAQ5VT25 1732 aa23.72■■□□□ 1.39
HNF4A-202ENST00000316673 FANCAO15360 1455 aa23.72■■□□□ 1.39
HNF4A-202ENST00000316673 ARHGAP5Q13017 1502 aa23.71■■□□□ 1.39
HNF4A-202ENST00000316673 CFDP1Q9UEE9 299 aaPredicted RBP23.69■■□□□ 1.38
HNF4A-202ENST00000316673 CDC42BPBQ9Y5S2 1711 aa23.68■■□□□ 1.38
HNF4A-202ENST00000316673 MYOM3Q5VTT5 1437 aa23.67■■□□□ 1.38
HNF4A-202ENST00000316673 TRIM26Q12899 539 aaPredicted RBP23.67■■□□□ 1.38
HNF4A-202ENST00000316673 MIA2Q96PC5 1412 aa23.65■■□□□ 1.38
HNF4A-202ENST00000316673 AKNAQ7Z591 1439 aa23.64■■□□□ 1.38
HNF4A-202ENST00000316673 PLEKHH2Q8IVE3 1493 aa23.62■■□□□ 1.37
HNF4A-202ENST00000316673 PPARGC1BQ86YN6 1023 aaKnown RBP23.6■■□□□ 1.37
HNF4A-202ENST00000316673 ADGRL1O94910 1474 aa23.6■■□□□ 1.37
HNF4A-202ENST00000316673 ZNF777Q9ULD5 760 aaPredicted RBP23.59■■□□□ 1.37
HNF4A-202ENST00000316673 KIAA1107Q9UPP5 1409 aa23.57■■□□□ 1.36
HNF4A-202ENST00000316673 FGD6Q6ZV73 1430 aa23.57■■□□□ 1.36
HNF4A-202ENST00000316673 KDM6BO15054 1643 aa23.56■■□□□ 1.36
HNF4A-202ENST00000316673 SAMD9LQ8IVG5 1584 aa23.55■■□□□ 1.36
HNF4A-202ENST00000316673 SCAPERQ9BY12 1400 aa23.55■■□□□ 1.36
HNF4A-202ENST00000316673 ABCC1P33527 1531 aa23.55■■□□□ 1.36
HNF4A-202ENST00000316673 DENND4BO75064 1496 aaPredicted RBP23.54■■□□□ 1.36
HNF4A-202ENST00000316673 CAMSAP2Q08AD1 1489 aa23.53■■□□□ 1.36
HNF4A-202ENST00000316673 RSPH4AQ5TD94 716 aa23.52■■□□□ 1.36
HNF4A-202ENST00000316673 ZNF518AQ6AHZ1 1483 aa23.5■■□□□ 1.35
HNF4A-202ENST00000316673 POGZQ7Z3K3 1410 aa23.5■■□□□ 1.35
HNF4A-202ENST00000316673 PTPN23Q9H3S7 1636 aa23.49■■□□□ 1.35
HNF4A-202ENST00000316673 TCOF1Q13428 1488 aaKnown RBP23.49■■□□□ 1.35
HNF4A-202ENST00000316673 ZNF644Q9H582 1327 aaPredicted RBP23.49■■□□□ 1.35
HNF4A-202ENST00000316673 COL17A1Q9UMD9 1497 aaPredicted RBP23.48■■□□□ 1.35
HNF4A-202ENST00000316673 SYCP2Q9BX26 1530 aa23.48■■□□□ 1.35
HNF4A-202ENST00000316673 PCGF6Q9BYE7 350 aa23.47■■□□□ 1.35
HNF4A-202ENST00000316673 RICTORQ6R327 1708 aa23.45■■□□□ 1.35
HNF4A-202ENST00000316673 ARHGEF12Q9NZN5 1544 aa23.45■■□□□ 1.34
HNF4A-202ENST00000316673 RAPGEF3O95398 923 aa23.45■■□□□ 1.34
HNF4A-202ENST00000316673 HNRNPMP52272 730 aaKnown RBP eCLIP23.45■■□□□ 1.342e-6■■■■□ 20.4
HNF4A-202ENST00000316673 MBD5Q9P267 1494 aa23.45■■□□□ 1.34
HNF4A-202ENST00000316673 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.45■■□□□ 1.342e-7■□□□□ 10.3
HNF4A-202ENST00000316673 ARHGEF5Q12774 1597 aa23.44■■□□□ 1.34
HNF4A-202ENST00000316673 RRBP1Q9P2E9 1410 aaKnown RBP23.43■■□□□ 1.34
HNF4A-202ENST00000316673 TRAPPC8Q9Y2L5 1435 aa23.42■■□□□ 1.34
HNF4A-202ENST00000316673 CCDC141Q6ZP82 1450 aa23.42■■□□□ 1.34
HNF4A-202ENST00000316673 MAGI2Q86UL8 1455 aa23.42■■□□□ 1.34
HNF4A-202ENST00000316673 ZMYM4Q5VZL5 1548 aa23.42■■□□□ 1.34
HNF4A-202ENST00000316673 KDM5CP41229 1560 aa23.41■■□□□ 1.34
HNF4A-202ENST00000316673 FRMPD1Q5SYB0 1578 aa23.41■■□□□ 1.34
HNF4A-202ENST00000316673 FAM50AQ14320 339 aaKnown RBP23.41■■□□□ 1.34
HNF4A-202ENST00000316673 AFAP1Q8N556 730 aa23.41■■□□□ 1.34
HNF4A-202ENST00000316673 TSPY4P0CV99 314 aa23.38■■□□□ 1.33
HNF4A-202ENST00000316673 TSPY10P0CW01 314 aa23.38■■□□□ 1.33
HNF4A-202ENST00000316673 KDM4FA0A1W2PPD8 638 aa23.37■■□□□ 1.33
HNF4A-202ENST00000316673 MLH3Q9UHC1 1453 aa23.37■■□□□ 1.33
HNF4A-202ENST00000316673 SPAG9O60271 1321 aaKnown RBP23.36■■□□□ 1.33
HNF4A-202ENST00000316673 DNMT1P26358 1616 aaKnown RBP23.35■■□□□ 1.33
HNF4A-202ENST00000316673 HECW2Q9P2P5 1572 aa23.35■■□□□ 1.33
HNF4A-202ENST00000316673 RTEL1-TNFRSF6BF6WH68 1400 aa23.34■■□□□ 1.33
HNF4A-202ENST00000316673 MYT1LQ9UL68 1186 aa23.33■■□□□ 1.33
HNF4A-202ENST00000316673 SHANK2Q9UPX8 1470 aa23.33■■□□□ 1.32
HNF4A-202ENST00000316673 DAPK1P53355 1430 aa23.33■■□□□ 1.32
HNF4A-202ENST00000316673 ABCC5O15440 1437 aa23.32■■□□□ 1.32
HNF4A-202ENST00000316673 ZFYVE16Q7Z3T8 1539 aa23.31■■□□□ 1.32
HNF4A-202ENST00000316673 ATP7AQ04656 1500 aa23.3■■□□□ 1.32
HNF4A-202ENST00000316673 INO80Q9ULG1 1556 aaPredicted RBP23.29■■□□□ 1.32
HNF4A-202ENST00000316673 MAST1Q9Y2H9 1570 aa23.29■■□□□ 1.32
HNF4A-202ENST00000316673 CROCC2H7BZ55 1655 aa23.29■■□□□ 1.32
HNF4A-202ENST00000316673 C9orf84Q5VXU9 1444 aa23.29■■□□□ 1.32
HNF4A-202ENST00000316673 ARHGEF40Q8TER5 1519 aa23.28■■□□□ 1.32
HNF4A-202ENST00000316673 KIDINS220Q9ULH0 1771 aa23.27■■□□□ 1.31
HNF4A-202ENST00000316673 YEATS2Q9ULM3 1422 aa23.24■■□□□ 1.31
HNF4A-202ENST00000316673 ATP10AO60312 1499 aa23.24■■□□□ 1.31
HNF4A-202ENST00000316673 ANKRD30AQ9BXX3 1397 aa23.22■■□□□ 1.31
HNF4A-202ENST00000316673 DIP2CQ9Y2E4 1556 aa23.22■■□□□ 1.31
HNF4A-202ENST00000316673 PLXNC1O60486 1568 aa23.21■■□□□ 1.31
HNF4A-202ENST00000316673 ABCA6Q8N139 1617 aa23.2■■□□□ 1.3
HNF4A-202ENST00000316673 ADGRL2O95490 1459 aa23.2■■□□□ 1.3
HNF4A-202ENST00000316673 ADGBQ8N7X0 1667 aa23.2■■□□□ 1.3
HNF4A-202ENST00000316673 REREQ9P2R6 1566 aa23.2■■□□□ 1.3
HNF4A-202ENST00000316673 ROCK1Q13464 1354 aa23.2■■□□□ 1.3
HNF4A-202ENST00000316673 ITGAEP38570 1179 aa23.19■■□□□ 1.3
HNF4A-202ENST00000316673 CHIC2Q9UKJ5 165 aa23.17■■□□□ 1.3
HNF4A-202ENST00000316673 NCOA1Q15788 1441 aa23.17■■□□□ 1.3
HNF4A-202ENST00000316673 PTPRKQ15262 1439 aa23.16■■□□□ 1.3
HNF4A-202ENST00000316673 A2MP01023 1474 aa23.16■■□□□ 1.3
HNF4A-202ENST00000316673 KIF15Q9NS87 1388 aa23.15■■□□□ 1.3
HNF4A-202ENST00000316673 DHX29Q7Z478 1369 aaKnown RBP23.14■■□□□ 1.29
HNF4A-202ENST00000316673 DUOX2Q9NRD8 1548 aa23.13■■□□□ 1.29
HNF4A-202ENST00000316673 AGLP35573 1532 aa23.12■■□□□ 1.29
HNF4A-202ENST00000316673 RRP7BPQ9NSQ0 103 aa23.11■■□□□ 1.29
HNF4A-202ENST00000316673 ARID4BQ4LE39 1312 aaPredicted RBP23.09■■□□□ 1.29
HNF4A-202ENST00000316673 ERBINQ96RT1 1412 aa23.09■■□□□ 1.29
HNF4A-202ENST00000316673 EIF2AK4Q9P2K8 1649 aaKnown RBP23.05■■□□□ 1.28
HNF4A-202ENST00000316673 HFM1A2PYH4 1435 aa23.04■■□□□ 1.28
HNF4A-202ENST00000316673 ANKRD50Q9ULJ7 1429 aa23.04■■□□□ 1.28
HNF4A-202ENST00000316673 BCORL1Q5H9F3 1711 aa23.04■■□□□ 1.28
HNF4A-202ENST00000316673 ILDR1Q86SU0 546 aaPredicted RBP23.02■■□□□ 1.28
HNF4A-202ENST00000316673 KIF3BO15066 747 aa23.01■■□□□ 1.27
HNF4A-202ENST00000316673 PPP6R1Q9UPN7 881 aa23■■□□□ 1.27
HNF4A-202ENST00000316673 SIGLEC1Q9BZZ2 1709 aa22.99■■□□□ 1.27
HNF4A-202ENST00000316673 NAIPQ13075 1403 aa22.99■■□□□ 1.27
HNF4A-202ENST00000316673 GCC2Q8IWJ2 1684 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms