RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 NISCHQ9Y2I1 1504 aa36.39■■■■□ 3.42
HNF4A-202ENST00000316673 CCDC180Q9P1Z9 1646 aa32.21■■■□□ 2.75
HNF4A-202ENST00000316673 ABCC9O60706 1549 aa31.03■■■□□ 2.56
HNF4A-202ENST00000316673 ZCCHC6Q5VYS8 1495 aaKnown RBP30.39■■■□□ 2.46
HNF4A-202ENST00000316673 DCAF8L2P0C7V8 631 aa30.2■■■□□ 2.43
HNF4A-202ENST00000316673 NACADO15069 1562 aa30.19■■■□□ 2.42
HNF4A-202ENST00000316673 MYO15BQ96JP2 1530 aa30.19■■■□□ 2.42
HNF4A-202ENST00000316673 DCAF1Q9Y4B6 1507 aa30.19■■■□□ 2.42
HNF4A-202ENST00000316673 RB1CC1Q8TDY2 1594 aa30.12■■■□□ 2.41
HNF4A-202ENST00000316673 UNC13AQ9UPW8 1703 aa29.35■■■□□ 2.29
HNF4A-202ENST00000316673 SCRIBQ14160 1630 aa29.33■■■□□ 2.29
HNF4A-202ENST00000316673 BICRAQ9NZM4 1560 aa29.11■■■□□ 2.25
HNF4A-202ENST00000316673 PABPN1Q86U42 306 aaKnown RBP eCLIP29.04■■■□□ 2.24
HNF4A-202ENST00000316673 DNAJC5BQ9UF47 199 aa29.04■■■□□ 2.24
HNF4A-202ENST00000316673 SHROOM4Q9ULL8 1493 aa29.01■■■□□ 2.23
HNF4A-202ENST00000316673 EIF4G1Q04637 1599 aaKnown RBP28.35■■■□□ 2.13
HNF4A-202ENST00000316673 CECR2Q9BXF3 1484 aa28.23■■■□□ 2.11
HNF4A-202ENST00000316673 BAZ1AQ9NRL2 1556 aaPredicted RBP28.21■■■□□ 2.11
HNF4A-202ENST00000316673 SMARCA4P51532 1647 aa28.13■■■□□ 2.09
HNF4A-202ENST00000316673 CC2D2AQ9P2K1 1620 aa28.11■■■□□ 2.09
HNF4A-202ENST00000316673 MROH2BQ7Z745 1585 aa28■■■□□ 2.07
HNF4A-202ENST00000316673 SMARCA2P51531 1590 aa27.93■■■□□ 2.06
HNF4A-202ENST00000316673 PEG3Q9GZU2 1588 aa27.89■■■□□ 2.06
HNF4A-202ENST00000316673 ATAD2BQ9ULI0 1458 aa27.88■■■□□ 2.05
HNF4A-202ENST00000316673 RSF1Q96T23 1441 aaPredicted RBP27.86■■■□□ 2.05
HNF4A-202ENST00000316673 NCAPD3P42695 1498 aa27.85■■■□□ 2.05
HNF4A-202ENST00000316673 HMGXB3Q12766 1538 aa27.75■■■□□ 2.03
HNF4A-202ENST00000316673 WIZO95785 1651 aa27.71■■■□□ 2.03
HNF4A-202ENST00000316673 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.02
HNF4A-202ENST00000316673 TOP2AP11388 1531 aaKnown RBP27.5■■□□□ 1.99
HNF4A-202ENST00000316673 SUPT5HO00267 1087 aaKnown RBP27.44■■□□□ 1.98
HNF4A-202ENST00000316673 CCDC88BA6NC98 1476 aa27.15■■□□□ 1.94
HNF4A-202ENST00000316673 LAMC3Q9Y6N6 1575 aa27.05■■□□□ 1.92
HNF4A-202ENST00000316673 CADPSQ9ULU8 1353 aa27.05■■□□□ 1.92
HNF4A-202ENST00000316673 CFTRP13569 1480 aa26.97■■□□□ 1.91
HNF4A-202ENST00000316673 DNAJC5Q9H3Z4 198 aa26.95■■□□□ 1.91
HNF4A-202ENST00000316673 NESP48681 1621 aa26.95■■□□□ 1.9
HNF4A-202ENST00000316673 PDS5BQ9NTI5 1447 aa26.88■■□□□ 1.89
HNF4A-202ENST00000316673 PRDM2Q13029 1718 aa26.8■■□□□ 1.88
HNF4A-202ENST00000316673 ERCC6Q03468 1493 aa26.79■■□□□ 1.88
HNF4A-202ENST00000316673 FANCD2Q9BXW9 1451 aa26.71■■□□□ 1.87
HNF4A-202ENST00000316673 KIF21AQ7Z4S6 1674 aa26.66■■□□□ 1.86
HNF4A-202ENST00000316673 CEP164Q9UPV0 1460 aa26.66■■□□□ 1.86
HNF4A-202ENST00000316673 CUX2O14529 1486 aa26.6■■□□□ 1.85
HNF4A-202ENST00000316673 MRC2Q9UBG0 1479 aa26.53■■□□□ 1.84
HNF4A-202ENST00000316673 THOC2Q8NI27 1593 aaKnown RBP26.49■■□□□ 1.83
HNF4A-202ENST00000316673 ABCC8Q09428 1581 aa26.45■■□□□ 1.82
HNF4A-202ENST00000316673 WDR62O43379 1518 aa26.43■■□□□ 1.82
HNF4A-202ENST00000316673 URB2Q14146 1524 aaKnown RBP26.39■■□□□ 1.81
HNF4A-202ENST00000316673 DNMBPQ6XZF7 1577 aa26.35■■□□□ 1.81
HNF4A-202ENST00000316673 TOPBP1Q92547 1522 aa26.33■■□□□ 1.81
HNF4A-202ENST00000316673 WRNQ14191 1432 aaPredicted RBP eCLIP26.29■■□□□ 1.8
HNF4A-202ENST00000316673 CUX1P39880 1505 aa26.25■■□□□ 1.79
HNF4A-202ENST00000316673 TOP2BQ02880 1626 aa26.18■■□□□ 1.78
HNF4A-202ENST00000316673 BIVM-ERCC5R4GMW8 1640 aa26.16■■□□□ 1.78
HNF4A-202ENST00000316673 POLA1P09884 1462 aaPredicted RBP26.13■■□□□ 1.77
HNF4A-202ENST00000316673 SYNJ1O43426 1573 aa26.13■■□□□ 1.77
HNF4A-202ENST00000316673 FGD5Q6ZNL6 1462 aa26.11■■□□□ 1.77
HNF4A-202ENST00000316673 IFT140Q96RY7 1462 aa26.11■■□□□ 1.77
HNF4A-202ENST00000316673 SOGA1O94964 1423 aa26.05■■□□□ 1.76
HNF4A-202ENST00000316673 TARBP1Q13395 1621 aaKnown RBP26■■□□□ 1.75
HNF4A-202ENST00000316673 RAD54L2Q9Y4B4 1467 aa25.97■■□□□ 1.75
HNF4A-202ENST00000316673 TRIM41Q8WV44 630 aa25.96■■□□□ 1.75
HNF4A-202ENST00000316673 ABCA10Q8WWZ4 1543 aa25.92■■□□□ 1.74
HNF4A-202ENST00000316673 WDR97A6NE52 1622 aa25.92■■□□□ 1.74
HNF4A-202ENST00000316673 ZNF608Q9ULD9 1512 aaPredicted RBP25.86■■□□□ 1.73
HNF4A-202ENST00000316673 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
HNF4A-202ENST00000316673 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
HNF4A-202ENST00000316673 EIF4G3O43432 1585 aaKnown RBP25.81■■□□□ 1.72
HNF4A-202ENST00000316673 AQRO60306 1485 aaKnown RBP eCLIP25.79■■□□□ 1.722e-7■■■■□ 26.1
HNF4A-202ENST00000316673 GAPVD1Q14C86 1478 aa25.76■■□□□ 1.71
HNF4A-202ENST00000316673 ABCA5Q8WWZ7 1642 aa25.75■■□□□ 1.71
HNF4A-202ENST00000316673 KIF27Q86VH2 1401 aa25.73■■□□□ 1.71
HNF4A-202ENST00000316673 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
HNF4A-202ENST00000316673 PBRM1Q86U86 1689 aa25.64■■□□□ 1.7
HNF4A-202ENST00000316673 ERICH3Q5RHP9 1530 aa25.64■■□□□ 1.7
HNF4A-202ENST00000316673 MAGI1Q96QZ7 1491 aaPredicted RBP25.62■■□□□ 1.69
HNF4A-202ENST00000316673 SNAPC4Q5SXM2 1469 aa25.58■■□□□ 1.68
HNF4A-202ENST00000316673 EEA1Q15075 1411 aa25.56■■□□□ 1.68
HNF4A-202ENST00000316673 IGF1RP08069 1367 aa25.53■■□□□ 1.68
HNF4A-202ENST00000316673 SYNJ2O15056 1496 aa25.5■■□□□ 1.67
HNF4A-202ENST00000316673 FHAD1B1AJZ9 1412 aa25.49■■□□□ 1.67
HNF4A-202ENST00000316673 RUSC2Q8N2Y8 1516 aa25.49■■□□□ 1.67
HNF4A-202ENST00000316673 CUL7Q14999 1698 aa25.48■■□□□ 1.67
HNF4A-202ENST00000316673 ADAMTS12P58397 1594 aa25.48■■□□□ 1.67
HNF4A-202ENST00000316673 CHMP7Q8WUX9 453 aaPredicted RBP25.47■■□□□ 1.67
HNF4A-202ENST00000316673 FBLN2P98095 1184 aa25.43■■□□□ 1.66
HNF4A-202ENST00000316673 CARMIL1Q5VZK9 1371 aa25.41■■□□□ 1.66
HNF4A-202ENST00000316673 CSRNP3Q8WYN3 585 aa25.4■■□□□ 1.66
HNF4A-202ENST00000316673 CHD1O14646 1710 aa25.39■■□□□ 1.66
HNF4A-202ENST00000316673 OSCARQ8IYS5 282 aa25.38■■□□□ 1.65
HNF4A-202ENST00000316673 GRIN2AQ12879 1464 aa25.36■■□□□ 1.65
HNF4A-202ENST00000316673 FAM9AQ8IZU1 332 aaPredicted RBP25.32■■□□□ 1.64
HNF4A-202ENST00000316673 RAPGEF2Q9Y4G8 1499 aa25.32■■□□□ 1.64
HNF4A-202ENST00000316673 PRXQ9BXM0 1461 aa25.31■■□□□ 1.64
HNF4A-202ENST00000316673 NUP160Q12769 1436 aa25.24■■□□□ 1.63
HNF4A-202ENST00000316673 KIF21BO75037 1637 aa25.19■■□□□ 1.62
HNF4A-202ENST00000316673 CEP170Q5SW79 1584 aa25.18■■□□□ 1.62
HNF4A-202ENST00000316673 CLASP1Q7Z460 1538 aa25.15■■□□□ 1.62
HNF4A-202ENST00000316673 KIAA0586Q9BVV6 1533 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms