RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ROCK2O75116 1388 aaKnown RBP17.78■□□□□ 0.44
SPAST-201ENST00000315285 NCLP19338 710 aaKnown RBP17.78■□□□□ 0.44
SPAST-201ENST00000315285 CASC1Q6TDU7 716 aa17.77■□□□□ 0.44
SPAST-201ENST00000315285 RCAN3Q9UKA8 241 aa17.76■□□□□ 0.43
SPAST-201ENST00000315285 MORC1Q86VD1 984 aa17.76■□□□□ 0.43
SPAST-201ENST00000315285 CHMP4BQ9H444 224 aaKnown RBP17.75■□□□□ 0.43
SPAST-201ENST00000315285 ARID4BQ4LE39 1312 aaPredicted RBP17.74■□□□□ 0.43
SPAST-201ENST00000315285 PNNQ9H307 717 aaKnown RBP17.73■□□□□ 0.43
SPAST-201ENST00000315285 CCDC18Q5T9S5 1454 aa17.71■□□□□ 0.43
SPAST-201ENST00000315285 SRPK2P78362 688 aaKnown RBP17.7■□□□□ 0.42
SPAST-201ENST00000315285 SAFB2Q14151 953 aaKnown RBP eCLIP17.67■□□□□ 0.42
SPAST-201ENST00000315285 DEKP35659 375 aaKnown RBP17.67■□□□□ 0.42
SPAST-201ENST00000315285 EFCAB2Q5VUJ9 269 aa17.67■□□□□ 0.42
SPAST-201ENST00000315285 TCERG1O14776 1098 aaKnown RBP17.66■□□□□ 0.42
SPAST-201ENST00000315285 RTN4Q9NQC3 1192 aaKnown RBP17.66■□□□□ 0.42
SPAST-201ENST00000315285 HSP90AB1P08238 724 aaKnown RBP17.66■□□□□ 0.42
SPAST-201ENST00000315285 GGT6Q6P531 493 aa17.66■□□□□ 0.42
SPAST-201ENST00000315285 NLRP13Q86W25 1043 aa17.66■□□□□ 0.42
SPAST-201ENST00000315285 HNRNPMP52272 730 aaKnown RBP eCLIP17.65■□□□□ 0.42
SPAST-201ENST00000315285 PTMAP06454 111 aaKnown RBP17.62■□□□□ 0.41
SPAST-201ENST00000315285 A0A0G2JS52 829 aa17.62■□□□□ 0.41
SPAST-201ENST00000315285 HSCBQ8IWL3 235 aa17.62■□□□□ 0.41
SPAST-201ENST00000315285 RSPH4AQ5TD94 716 aa17.6■□□□□ 0.41
SPAST-201ENST00000315285 PDE3BQ13370 1112 aa17.6■□□□□ 0.41
SPAST-201ENST00000315285 U2AF1L5P0DN76 240 aaPredicted RBP17.59■□□□□ 0.41
SPAST-201ENST00000315285 U2AF1Q01081 240 aaKnown RBP eCLIP17.59■□□□□ 0.41
SPAST-201ENST00000315285 PRKRIP1Q9H875 184 aaPredicted RBP17.59■□□□□ 0.41
SPAST-201ENST00000315285 STK26Q9P289 416 aa17.59■□□□□ 0.41
SPAST-201ENST00000315285 FANCD2Q9BXW9 1451 aa17.59■□□□□ 0.41
SPAST-201ENST00000315285 IGF1RP08069 1367 aa17.58■□□□□ 0.4
SPAST-201ENST00000315285 EIF3AQ14152 1382 aaKnown RBP17.58■□□□□ 0.4
SPAST-201ENST00000315285 ST20-MTHFSA0A0A6YYL1 179 aa17.57■□□□□ 0.4
SPAST-201ENST00000315285 TPRNQ4KMQ1 711 aa17.57■□□□□ 0.4
SPAST-201ENST00000315285 KIF15Q9NS87 1388 aa17.57■□□□□ 0.4
SPAST-201ENST00000315285 GOLGA2Q08379 1002 aa17.57■□□□□ 0.4
SPAST-201ENST00000315285 KIF21BO75037 1637 aa17.56■□□□□ 0.4
SPAST-201ENST00000315285 IPO8O15397 1037 aaKnown RBP17.56■□□□□ 0.4
SPAST-201ENST00000315285 HDGFL2Q7Z4V5 671 aaPredicted RBP17.56■□□□□ 0.4
SPAST-201ENST00000315285 JPH4Q96JJ6 628 aa17.56■□□□□ 0.4
SPAST-201ENST00000315285 KIF3BO15066 747 aa17.55■□□□□ 0.4
SPAST-201ENST00000315285 MYBBP1AQ9BQG0 1328 aaKnown RBP17.55■□□□□ 0.4
SPAST-201ENST00000315285 LMOD2Q6P5Q4 547 aa17.55■□□□□ 0.4
SPAST-201ENST00000315285 HDGFP51858 240 aaKnown RBP17.54■□□□□ 0.4
SPAST-201ENST00000315285 MLECQ14165 292 aa17.54■□□□□ 0.4
SPAST-201ENST00000315285 SPRYD3Q8NCJ5 442 aa17.54■□□□□ 0.4
SPAST-201ENST00000315285 IPO9Q96P70 1041 aaKnown RBP17.54■□□□□ 0.4
SPAST-201ENST00000315285 PHLDB1Q86UU1 1377 aa17.54■□□□□ 0.4
SPAST-201ENST00000315285 HAP1P54257 671 aaPredicted RBP17.54■□□□□ 0.4
SPAST-201ENST00000315285 RWDD1Q9H446 243 aaPredicted RBP17.54■□□□□ 0.4
SPAST-201ENST00000315285 SOX12O15370 315 aa17.54■□□□□ 0.4
SPAST-201ENST00000315285 OS9Q13438 667 aaPredicted RBP17.54■□□□□ 0.4
SPAST-201ENST00000315285 NAP1L5Q96NT1 182 aaPredicted RBP17.53■□□□□ 0.4
SPAST-201ENST00000315285 ZBED9Q6R2W3 1325 aa17.52■□□□□ 0.4
SPAST-201ENST00000315285 FGD5Q6ZNL6 1462 aa17.52■□□□□ 0.39
SPAST-201ENST00000315285 ZRSR1Q15695 479 aaKnown RBP17.52■□□□□ 0.39
SPAST-201ENST00000315285 DNTTIP2Q5QJE6 756 aaKnown RBP17.52■□□□□ 0.39
SPAST-201ENST00000315285 SPAG9O60271 1321 aaKnown RBP17.51■□□□□ 0.39
SPAST-201ENST00000315285 CCDC146Q8IYE0 955 aa17.51■□□□□ 0.39
SPAST-201ENST00000315285 CCDC144AA2RUR9 1427 aa17.5■□□□□ 0.39
SPAST-201ENST00000315285 USP47Q96K76 1375 aa17.5■□□□□ 0.39
SPAST-201ENST00000315285 L1TD1Q5T7N2 865 aaKnown RBP17.5■□□□□ 0.39
SPAST-201ENST00000315285 ITPRIPQ8IWB1 547 aa17.5■□□□□ 0.39
SPAST-201ENST00000315285 FGD6Q6ZV73 1430 aa17.49■□□□□ 0.39
SPAST-201ENST00000315285 PMFBP1Q8TBY8 1022 aa17.48■□□□□ 0.39
SPAST-201ENST00000315285 CFAP44Q96MT7 982 aa17.48■□□□□ 0.39
SPAST-201ENST00000315285 PANK3Q9H999 370 aa17.48■□□□□ 0.39
SPAST-201ENST00000315285 CALD1Q05682 793 aaKnown RBP17.48■□□□□ 0.39
SPAST-201ENST00000315285 KCNJ4P48050 445 aa17.47■□□□□ 0.39
SPAST-201ENST00000315285 SLKQ9H2G2 1235 aaPredicted RBP17.47■□□□□ 0.39
SPAST-201ENST00000315285 PLCB2Q00722 1185 aa17.46■□□□□ 0.39
SPAST-201ENST00000315285 RTF1Q92541 710 aaKnown RBP17.46■□□□□ 0.39
SPAST-201ENST00000315285 CENPJQ9HC77 1338 aaPredicted RBP17.46■□□□□ 0.39
SPAST-201ENST00000315285 LRRC9Q6ZRR7 1453 aa17.45■□□□□ 0.38
SPAST-201ENST00000315285 SMC4Q9NTJ3 1288 aa17.45■□□□□ 0.38
SPAST-201ENST00000315285 MYOM3Q5VTT5 1437 aa17.44■□□□□ 0.38
SPAST-201ENST00000315285 MCCP23508 829 aa17.44■□□□□ 0.38
SPAST-201ENST00000315285 CLUAP1Q96AJ1 413 aa17.44■□□□□ 0.38
SPAST-201ENST00000315285 UACAQ9BZF9 1416 aa17.44■□□□□ 0.38
SPAST-201ENST00000315285 APBB1O00213 710 aa17.44■□□□□ 0.38
SPAST-201ENST00000315285 FGD1P98174 961 aa17.43■□□□□ 0.38
SPAST-201ENST00000315285 TERF2IPQ9NYB0 399 aa17.43■□□□□ 0.38
SPAST-201ENST00000315285 GAPVD1Q14C86 1478 aa17.42■□□□□ 0.38
SPAST-201ENST00000315285 RAD54L2Q9Y4B4 1467 aa17.42■□□□□ 0.38
SPAST-201ENST00000315285 RRP1P56182 461 aaKnown RBP17.41■□□□□ 0.38
SPAST-201ENST00000315285 CUX1P39880 1505 aa17.4■□□□□ 0.38
SPAST-201ENST00000315285 EXOC6Q8TAG9 804 aa17.39■□□□□ 0.38
SPAST-201ENST00000315285 GBP4Q96PP9 640 aa17.39■□□□□ 0.37
SPAST-201ENST00000315285 ARAP1Q96P48 1450 aa17.39■□□□□ 0.37
SPAST-201ENST00000315285 TRAK1Q9UPV9 953 aa17.39■□□□□ 0.37
SPAST-201ENST00000315285 WASHC2CQ9Y4E1 1318 aa17.39■□□□□ 0.37
SPAST-201ENST00000315285 MFAP1P55081 439 aaKnown RBP17.38■□□□□ 0.37
SPAST-201ENST00000315285 CCDC7Q96M83 1385 aa17.38■□□□□ 0.37
SPAST-201ENST00000315285 PLIN1O60240 522 aa17.38■□□□□ 0.37
SPAST-201ENST00000315285 NUTM2DQ5VT03 806 aaPredicted RBP17.38■□□□□ 0.37
SPAST-201ENST00000315285 ERICH3Q5RHP9 1530 aa17.38■□□□□ 0.37
SPAST-201ENST00000315285 RRBP1Q9P2E9 1410 aaKnown RBP17.37■□□□□ 0.37
SPAST-201ENST00000315285 PDE4AP27815 886 aa17.37■□□□□ 0.37
SPAST-201ENST00000315285 PTPRGP23470 1445 aa17.37■□□□□ 0.37
SPAST-201ENST00000315285 KIF7Q2M1P5 1343 aa17.37■□□□□ 0.37
SPAST-201ENST00000315285 CENPQQ7L2Z9 268 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 225.1 ms