RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 MYO5CQ9NQX4 1742 aa37.46■■■■□ 3.59
CDPF1-201ENST00000314567 PREX2Q70Z35 1606 aa37.46■■■■□ 3.59
CDPF1-201ENST00000314567 ABCA9Q8IUA7 1624 aa37.44■■■■□ 3.58
CDPF1-201ENST00000314567 TCOF1Q13428 1488 aaKnown RBP37.41■■■■□ 3.58
CDPF1-201ENST00000314567 ARHGAP5Q13017 1502 aa37.39■■■■□ 3.58
CDPF1-201ENST00000314567 CAMSAP2Q08AD1 1489 aa37.38■■■■□ 3.57
CDPF1-201ENST00000314567 PLCH2O75038 1416 aa37.36■■■■□ 3.57
CDPF1-201ENST00000314567 CCER1Q8TC90 406 aaPredicted RBP37.35■■■■□ 3.57
CDPF1-201ENST00000314567 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.33■■■■□ 3.57
CDPF1-201ENST00000314567 SAMD9LQ8IVG5 1584 aa37.31■■■■□ 3.56
CDPF1-201ENST00000314567 DIP2BQ9P265 1576 aa37.31■■■■□ 3.56
CDPF1-201ENST00000314567 FAM69CQ0P6D2 419 aa37.28■■■■□ 3.56
CDPF1-201ENST00000314567 PTPRKQ15262 1439 aa37.27■■■■□ 3.56
CDPF1-201ENST00000314567 CD109Q6YHK3 1445 aa37.27■■■■□ 3.56
CDPF1-201ENST00000314567 HNRNPMP52272 730 aaKnown RBP eCLIP37.22■■■■□ 3.55
CDPF1-201ENST00000314567 GLI2P10070 1586 aa37.22■■■■□ 3.55
CDPF1-201ENST00000314567 EFCAB2Q5VUJ9 269 aa37.22■■■■□ 3.55
CDPF1-201ENST00000314567 MAP3K4Q9Y6R4 1608 aa37.21■■■■□ 3.55
CDPF1-201ENST00000314567 FANCAO15360 1455 aa37.2■■■■□ 3.54
CDPF1-201ENST00000314567 ARAP3Q8WWN8 1544 aa37.19■■■■□ 3.54
CDPF1-201ENST00000314567 KIF13AQ9H1H9 1805 aa37.19■■■■□ 3.54
CDPF1-201ENST00000314567 DNMT1P26358 1616 aaKnown RBP37.18■■■■□ 3.54
CDPF1-201ENST00000314567 SYCP2Q9BX26 1530 aa37.18■■■■□ 3.54
CDPF1-201ENST00000314567 ABCC5O15440 1437 aa37.17■■■■□ 3.54
CDPF1-201ENST00000314567 CHIC2Q9UKJ5 165 aa37.17■■■■□ 3.54
CDPF1-201ENST00000314567 DAPK1P53355 1430 aa37.17■■■■□ 3.54
CDPF1-201ENST00000314567 ARHGEF12Q9NZN5 1544 aa37.15■■■■□ 3.54
CDPF1-201ENST00000314567 TSPOAP1O95153 1857 aa37.14■■■■□ 3.54
CDPF1-201ENST00000314567 MBD5Q9P267 1494 aa37.13■■■■□ 3.53
CDPF1-201ENST00000314567 ABCC1P33527 1531 aa37.1■■■■□ 3.53
CDPF1-201ENST00000314567 CROCC2H7BZ55 1655 aa37.06■■■■□ 3.52
CDPF1-201ENST00000314567 AKNAQ7Z591 1439 aa37.05■■■■□ 3.52
CDPF1-201ENST00000314567 ARHGEF5Q12774 1597 aa37.04■■■■□ 3.52
CDPF1-201ENST00000314567 PLEKHH2Q8IVE3 1493 aa37.04■■■■□ 3.52
CDPF1-201ENST00000314567 KIAA1107Q9UPP5 1409 aa37.03■■■■□ 3.52
CDPF1-201ENST00000314567 PPRC1Q5VV67 1664 aaKnown RBP37.03■■■■□ 3.52
CDPF1-201ENST00000314567 ADGRL1O94910 1474 aa37.03■■■■□ 3.52
CDPF1-201ENST00000314567 TRAPPC8Q9Y2L5 1435 aa37.02■■■■□ 3.52
CDPF1-201ENST00000314567 CCDC141Q6ZP82 1450 aa37.01■■■■□ 3.51
CDPF1-201ENST00000314567 RRP7BPQ9NSQ0 103 aa37.01■■■■□ 3.51
CDPF1-201ENST00000314567 SCAPERQ9BY12 1400 aa36.99■■■■□ 3.51
CDPF1-201ENST00000314567 CFAP74Q9C0B2 1584 aa36.98■■■■□ 3.51
CDPF1-201ENST00000314567 AFAP1Q8N556 730 aa36.96■■■■□ 3.51
CDPF1-201ENST00000314567 C9orf84Q5VXU9 1444 aa36.94■■■■□ 3.5
CDPF1-201ENST00000314567 TRHP20396 242 aaPredicted RBP36.93■■■■□ 3.5
CDPF1-201ENST00000314567 NEO1Q92859 1461 aa36.93■■■■□ 3.5
CDPF1-201ENST00000314567 TSPY4P0CV99 314 aa36.92■■■■□ 3.5
CDPF1-201ENST00000314567 TSPY10P0CW01 314 aa36.92■■■■□ 3.5
CDPF1-201ENST00000314567 RSPH4AQ5TD94 716 aa36.9■■■■□ 3.5
CDPF1-201ENST00000314567 SHANK2Q9UPX8 1470 aa36.9■■■■□ 3.5
CDPF1-201ENST00000314567 ADGBQ8N7X0 1667 aa36.9■■■■□ 3.5
CDPF1-201ENST00000314567 NAIPQ13075 1403 aa36.89■■■■□ 3.5
CDPF1-201ENST00000314567 SETD5Q9C0A6 1442 aa36.89■■■■□ 3.5
CDPF1-201ENST00000314567 HFM1A2PYH4 1435 aa36.88■■■■□ 3.49
CDPF1-201ENST00000314567 CLSPNQ9HAW4 1339 aa36.87■■■■□ 3.49
CDPF1-201ENST00000314567 RAB3GAP2Q9H2M9 1393 aa36.87■■■■□ 3.49
CDPF1-201ENST00000314567 NCOA1Q15788 1441 aa36.85■■■■□ 3.49
CDPF1-201ENST00000314567 ROCK1Q13464 1354 aa36.85■■■■□ 3.49
CDPF1-201ENST00000314567 DHX57Q6P158 1386 aaKnown RBP36.85■■■■□ 3.49
CDPF1-201ENST00000314567 ADGRL2O95490 1459 aa36.84■■■■□ 3.49
CDPF1-201ENST00000314567 TEX14Q8IWB6 1497 aa36.83■■■■□ 3.49
CDPF1-201ENST00000314567 RAPGEF3O95398 923 aa36.82■■■■□ 3.49
CDPF1-201ENST00000314567 KDM6BO15054 1643 aa36.81■■■■□ 3.48
CDPF1-201ENST00000314567 GCC2Q8IWJ2 1684 aa36.81■■■■□ 3.48
CDPF1-201ENST00000314567 MAST1Q9Y2H9 1570 aa36.8■■■■□ 3.48
CDPF1-201ENST00000314567 ANKRD30AQ9BXX3 1397 aa36.8■■■■□ 3.48
CDPF1-201ENST00000314567 POGZQ7Z3K3 1410 aa36.8■■■■□ 3.48
CDPF1-201ENST00000314567 SPAG9O60271 1321 aaKnown RBP36.78■■■■□ 3.48
CDPF1-201ENST00000314567 DENND4BO75064 1496 aaPredicted RBP36.76■■■■□ 3.48
CDPF1-201ENST00000314567 ZNF518AQ6AHZ1 1483 aa36.76■■■■□ 3.48
CDPF1-201ENST00000314567 ZFYVE16Q7Z3T8 1539 aa36.74■■■■□ 3.47
CDPF1-201ENST00000314567 KIF15Q9NS87 1388 aa36.73■■■■□ 3.47
CDPF1-201ENST00000314567 RICTORQ6R327 1708 aa36.72■■■■□ 3.47
CDPF1-201ENST00000314567 MYT1LQ9UL68 1186 aa36.72■■■■□ 3.47
CDPF1-201ENST00000314567 INO80Q9ULG1 1556 aaPredicted RBP36.7■■■■□ 3.47
CDPF1-201ENST00000314567 KDM5CP41229 1560 aa36.69■■■■□ 3.46
CDPF1-201ENST00000314567 ATP7AQ04656 1500 aa36.69■■■■□ 3.46
CDPF1-201ENST00000314567 FRMPD1Q5SYB0 1578 aa36.69■■■■□ 3.46
CDPF1-201ENST00000314567 PLXNC1O60486 1568 aa36.67■■■■□ 3.46
CDPF1-201ENST00000314567 COL17A1Q9UMD9 1497 aaPredicted RBP36.67■■■■□ 3.46
CDPF1-201ENST00000314567 KIDINS220Q9ULH0 1771 aa36.66■■■■□ 3.46
CDPF1-201ENST00000314567 RTEL1-TNFRSF6BF6WH68 1400 aa36.65■■■■□ 3.46
CDPF1-201ENST00000314567 ANKRD50Q9ULJ7 1429 aa36.62■■■■□ 3.45
CDPF1-201ENST00000314567 HECW2Q9P2P5 1572 aa36.61■■■■□ 3.45
CDPF1-201ENST00000314567 MLH3Q9UHC1 1453 aa36.57■■■■□ 3.44
CDPF1-201ENST00000314567 DUOX2Q9NRD8 1548 aa36.53■■■■□ 3.44
CDPF1-201ENST00000314567 ABCA6Q8N139 1617 aa36.52■■■■□ 3.44
CDPF1-201ENST00000314567 TRIM52Q96A61 297 aa36.52■■■■□ 3.44
CDPF1-201ENST00000314567 YEATS2Q9ULM3 1422 aa36.51■■■■□ 3.43
CDPF1-201ENST00000314567 ZMYM4Q5VZL5 1548 aa36.48■■■■□ 3.43
CDPF1-201ENST00000314567 DIP2CQ9Y2E4 1556 aa36.45■■■■□ 3.43
CDPF1-201ENST00000314567 ERBINQ96RT1 1412 aa36.43■■■■□ 3.42
CDPF1-201ENST00000314567 A2MP01023 1474 aa36.4■■■■□ 3.42
CDPF1-201ENST00000314567 DHX29Q7Z478 1369 aaKnown RBP36.4■■■■□ 3.42
CDPF1-201ENST00000314567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.35■■■■□ 3.41
CDPF1-201ENST00000314567 ACIN1Q9UKV3 1341 aaKnown RBP36.34■■■■□ 3.41
CDPF1-201ENST00000314567 NUP155O75694 1391 aa36.33■■■■□ 3.41
CDPF1-201ENST00000314567 MAGI2Q86UL8 1455 aa36.33■■■■□ 3.41
CDPF1-201ENST00000314567 KIF3BO15066 747 aa36.33■■■■□ 3.41
CDPF1-201ENST00000314567 PZPP20742 1482 aa36.31■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms