RNA–Protein interactions for RNA: ENST00000311437.10

ZNF490-201, Transcript of zinc finger protein 490, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF490, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF490-201ENST00000311437 GOLGA3Q08378 1498 aa8.91□□□□□ -0.98
ZNF490-201ENST00000311437 TCERG1O14776 1098 aaKnown RBP8.91□□□□□ -0.98
ZNF490-201ENST00000311437 ARID3AQ99856 593 aa8.91□□□□□ -0.98
ZNF490-201ENST00000311437 CANXP27824 592 aaKnown RBP8.9□□□□□ -0.98
ZNF490-201ENST00000311437 TEX14Q8IWB6 1497 aa8.89□□□□□ -0.99
ZNF490-201ENST00000311437 TSPY4P0CV99 314 aa8.88□□□□□ -0.99
ZNF490-201ENST00000311437 TSPY10P0CW01 314 aa8.88□□□□□ -0.99
ZNF490-201ENST00000311437 POGZQ7Z3K3 1410 aa8.88□□□□□ -0.99
ZNF490-201ENST00000311437 PLPPR3Q6T4P5 718 aa8.88□□□□□ -0.99
ZNF490-201ENST00000311437 STAG3Q9UJ98 1225 aa8.88□□□□□ -0.99
ZNF490-201ENST00000311437 SIN3AQ96ST3 1273 aa8.88□□□□□ -0.99
ZNF490-201ENST00000311437 PRG4Q92954 1404 aaPredicted RBP8.88□□□□□ -0.99
ZNF490-201ENST00000311437 CARMIL1Q5VZK9 1371 aa8.88□□□□□ -0.99
ZNF490-201ENST00000311437 TNIKQ9UKE5 1360 aa8.88□□□□□ -0.99
ZNF490-201ENST00000311437 FAM43AQ8N2R8 423 aa8.88□□□□□ -0.99
ZNF490-201ENST00000311437 EEA1Q15075 1411 aa8.87□□□□□ -0.99
ZNF490-201ENST00000311437 PLEKHG5O94827 1062 aa8.87□□□□□ -0.99
ZNF490-201ENST00000311437 DMRT2Q9Y5R5 561 aa8.87□□□□□ -0.99
ZNF490-201ENST00000311437 MTUS2Q5JR59 1369 aa8.87□□□□□ -0.99
ZNF490-201ENST00000311437 FRAT1Q92837 279 aaPredicted RBP8.87□□□□□ -0.99
ZNF490-201ENST00000311437 RAD54L2Q9Y4B4 1467 aa8.86□□□□□ -0.99
ZNF490-201ENST00000311437 GOLGA6L3A6NEY3 463 aa8.85□□□□□ -0.99
ZNF490-201ENST00000311437 CHGAP10645 457 aaKnown RBP8.85□□□□□ -0.99
ZNF490-201ENST00000311437 GZF1Q9H116 711 aaPredicted RBP8.85□□□□□ -0.99
ZNF490-201ENST00000311437 SLC4A3P48751 1232 aa8.85□□□□□ -0.99
ZNF490-201ENST00000311437 RGS3P49796 1198 aa8.85□□□□□ -0.99
ZNF490-201ENST00000311437 EIF4G2P78344 907 aaKnown RBP eCLIP8.85□□□□□ -0.99
ZNF490-201ENST00000311437 DNTTIP2Q5QJE6 756 aaKnown RBP8.85□□□□□ -0.99
ZNF490-201ENST00000311437 PLB1Q6P1J6 1458 aa8.85□□□□□ -0.99
ZNF490-201ENST00000311437 PDE4AP27815 886 aa8.85□□□□□ -0.99
ZNF490-201ENST00000311437 MSNP26038 577 aaKnown RBP8.85□□□□□ -0.99
ZNF490-201ENST00000311437 NFKBIBQ15653 356 aa8.85□□□□□ -0.99
ZNF490-201ENST00000311437 RRP9O43818 475 aaKnown RBP8.84□□□□□ -0.99
ZNF490-201ENST00000311437 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.84□□□□□ -0.99
ZNF490-201ENST00000311437 ZNF608Q9ULD9 1512 aaPredicted RBP8.84□□□□□ -0.99
ZNF490-201ENST00000311437 FOXD1Q16676 465 aa8.83□□□□□ -1
ZNF490-201ENST00000311437 PHLDB1Q86UU1 1377 aa8.83□□□□□ -1
ZNF490-201ENST00000311437 MYH16Q9H6N6 1097 aa8.83□□□□□ -1
ZNF490-201ENST00000311437 CLIP1P30622 1438 aa8.82□□□□□ -1
ZNF490-201ENST00000311437 SLKQ9H2G2 1235 aaPredicted RBP8.82□□□□□ -1
ZNF490-201ENST00000311437 ABCA10Q8WWZ4 1543 aa8.82□□□□□ -1
ZNF490-201ENST00000311437 GRIN2AQ12879 1464 aa8.81□□□□□ -1
ZNF490-201ENST00000311437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.81□□□□□ -1
ZNF490-201ENST00000311437 CHIC2Q9UKJ5 165 aa8.81□□□□□ -1
ZNF490-201ENST00000311437 EIF4G3O43432 1585 aaKnown RBP8.81□□□□□ -1
ZNF490-201ENST00000311437 PDE4CQ08493 712 aa8.81□□□□□ -1
ZNF490-201ENST00000311437 GOLGA6L22H0YM25 854 aa8.8□□□□□ -1
ZNF490-201ENST00000311437 PTMAP06454 111 aaKnown RBP8.8□□□□□ -1
ZNF490-201ENST00000311437 ERICH3Q5RHP9 1530 aa8.78□□□□□ -1
ZNF490-201ENST00000311437 FAM13BQ9NYF5 915 aa8.78□□□□□ -1
ZNF490-201ENST00000311437 RIMBP3CA6NJZ7 1639 aa8.77□□□□□ -1.01
ZNF490-201ENST00000311437 RIMBP3BA6NNM3 1639 aa8.77□□□□□ -1.01
ZNF490-201ENST00000311437 KIAA0586Q9BVV6 1533 aa8.77□□□□□ -1.01
ZNF490-201ENST00000311437 RIMBP3Q9UFD9 1639 aa8.77□□□□□ -1.01
ZNF490-201ENST00000311437 EFCAB2Q5VUJ9 269 aa8.77□□□□□ -1.01
ZNF490-201ENST00000311437 NUDCQ9Y266 331 aa8.77□□□□□ -1.01
ZNF490-201ENST00000311437 SPRYD3Q8NCJ5 442 aa8.76□□□□□ -1.01
ZNF490-201ENST00000311437 DHX57Q6P158 1386 aaKnown RBP8.76□□□□□ -1.01
ZNF490-201ENST00000311437 PRDM2Q13029 1718 aa8.76□□□□□ -1.01
ZNF490-201ENST00000311437 C11orf95C9JLR9 678 aaPredicted RBP8.75□□□□□ -1.01
ZNF490-201ENST00000311437 CFDP1Q9UEE9 299 aaPredicted RBP8.75□□□□□ -1.01
ZNF490-201ENST00000311437 MS4A1P11836 297 aa8.74□□□□□ -1.01
ZNF490-201ENST00000311437 FRAT2O75474 233 aaPredicted RBP8.74□□□□□ -1.01
ZNF490-201ENST00000311437 ARAP1Q96P48 1450 aa8.73□□□□□ -1.01
ZNF490-201ENST00000311437 PHF23Q9BUL5 403 aaPredicted RBP8.73□□□□□ -1.01
ZNF490-201ENST00000311437 RAPGEF2Q9Y4G8 1499 aa8.73□□□□□ -1.01
ZNF490-201ENST00000311437 RCAN3Q9UKA8 241 aa8.72□□□□□ -1.01
ZNF490-201ENST00000311437 UACAQ9BZF9 1416 aa8.72□□□□□ -1.01
ZNF490-201ENST00000311437 PPP1R15AO75807 674 aaPredicted RBP8.72□□□□□ -1.01
ZNF490-201ENST00000311437 TPM2P07951 284 aa8.72□□□□□ -1.01
ZNF490-201ENST00000311437 MAP7D2Q96T17 732 aa8.71□□□□□ -1.01
ZNF490-201ENST00000311437 ZBED9Q6R2W3 1325 aa8.71□□□□□ -1.01
ZNF490-201ENST00000311437 ZBTB7CA1YPR0 619 aa8.71□□□□□ -1.02
ZNF490-201ENST00000311437 RBM10P98175 930 aaKnown RBP8.71□□□□□ -1.02
ZNF490-201ENST00000311437 HDGFP51858 240 aaKnown RBP8.7□□□□□ -1.02
ZNF490-201ENST00000311437 EXOC6Q8TAG9 804 aa8.7□□□□□ -1.02
ZNF490-201ENST00000311437 NUP160Q12769 1436 aa8.69□□□□□ -1.02
ZNF490-201ENST00000311437 TNNT3P45378 269 aaPredicted RBP8.69□□□□□ -1.02
ZNF490-201ENST00000311437 RRP7BPQ9NSQ0 103 aa8.69□□□□□ -1.02
ZNF490-201ENST00000311437 HSPA5P11021 654 aaKnown RBP8.68□□□□□ -1.02
ZNF490-201ENST00000311437 CCNB3Q8WWL7 1395 aa8.68□□□□□ -1.02
ZNF490-201ENST00000311437 WASHC2AQ641Q2 1341 aa8.68□□□□□ -1.02
ZNF490-201ENST00000311437 CUX1P39880 1505 aa8.67□□□□□ -1.02
ZNF490-201ENST00000311437 FAM161AQ3B820 660 aa8.67□□□□□ -1.02
ZNF490-201ENST00000311437 HSCBQ8IWL3 235 aa8.67□□□□□ -1.02
ZNF490-201ENST00000311437 CHAF1AQ13111 956 aaPredicted RBP8.67□□□□□ -1.02
ZNF490-201ENST00000311437 HSP90AB1P08238 724 aaKnown RBP8.67□□□□□ -1.02
ZNF490-201ENST00000311437 WDR43Q15061 677 aaKnown RBP eCLIP8.67□□□□□ -1.02
ZNF490-201ENST00000311437 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.67□□□□□ -1.02
ZNF490-201ENST00000311437 PDCL3Q9H2J4 239 aa8.67□□□□□ -1.02
ZNF490-201ENST00000311437 MLECQ14165 292 aa8.66□□□□□ -1.02
ZNF490-201ENST00000311437 CD109Q6YHK3 1445 aa8.66□□□□□ -1.02
ZNF490-201ENST00000311437 GBP4Q96PP9 640 aa8.66□□□□□ -1.02
ZNF490-201ENST00000311437 BACH2Q9BYV9 841 aa8.66□□□□□ -1.02
ZNF490-201ENST00000311437 CUL7Q14999 1698 aa8.65□□□□□ -1.02
ZNF490-201ENST00000311437 MRE11P49959 708 aa8.65□□□□□ -1.02
ZNF490-201ENST00000311437 MTERF4Q7Z6M4 381 aaKnown RBP8.65□□□□□ -1.02
ZNF490-201ENST00000311437 KDM2AQ9Y2K7 1162 aa8.65□□□□□ -1.02
ZNF490-201ENST00000311437 AKNAQ7Z591 1439 aa8.65□□□□□ -1.02
ZNF490-201ENST00000311437 WASHC2CQ9Y4E1 1318 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms