RNA–Protein interactions for RNA: ENST00000311437.10

ZNF490-201, Transcript of zinc finger protein 490, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF490, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF490-201ENST00000311437 NISCHQ9Y2I1 1504 aa12.16□□□□□ -0.46
ZNF490-201ENST00000311437 PELP1Q8IZL8 1130 aaKnown RBP11.53□□□□□ -0.56
ZNF490-201ENST00000311437 DCAF8L2P0C7V8 631 aa11.49□□□□□ -0.57
ZNF490-201ENST00000311437 MYT1Q01538 1121 aa11.33□□□□□ -0.59
ZNF490-201ENST00000311437 ABCC9O60706 1549 aa11.12□□□□□ -0.63
ZNF490-201ENST00000311437 PCGF6Q9BYE7 350 aa10.97□□□□□ -0.65
ZNF490-201ENST00000311437 HRCP23327 699 aa10.96□□□□□ -0.65
ZNF490-201ENST00000311437 CCDC180Q9P1Z9 1646 aa10.86□□□□□ -0.67
ZNF490-201ENST00000311437 SUPT5HO00267 1087 aaKnown RBP10.81□□□□□ -0.68
ZNF490-201ENST00000311437 CENPBP07199 599 aaPredicted RBP10.75□□□□□ -0.69
ZNF490-201ENST00000311437 PPARGC1BQ86YN6 1023 aaKnown RBP10.75□□□□□ -0.69
ZNF490-201ENST00000311437 RB1CC1Q8TDY2 1594 aa10.68□□□□□ -0.7
ZNF490-201ENST00000311437 ZEB1P37275 1124 aaPredicted RBP10.66□□□□□ -0.7
ZNF490-201ENST00000311437 SHROOM4Q9ULL8 1493 aa10.58□□□□□ -0.72
ZNF490-201ENST00000311437 NACADO15069 1562 aa10.53□□□□□ -0.72
ZNF490-201ENST00000311437 TTBK1Q5TCY1 1321 aaPredicted RBP10.51□□□□□ -0.73
ZNF490-201ENST00000311437 PABPN1Q86U42 306 aaKnown RBP eCLIP10.46□□□□□ -0.74
ZNF490-201ENST00000311437 YTHDC1Q96MU7 727 aaKnown RBP10.41□□□□□ -0.74
ZNF490-201ENST00000311437 GTF3C3Q9Y5Q9 886 aa10.41□□□□□ -0.74
ZNF490-201ENST00000311437 SCAF1Q9H7N4 1312 aaKnown RBP10.41□□□□□ -0.74
ZNF490-201ENST00000311437 TRIM26Q12899 539 aaPredicted RBP10.38□□□□□ -0.75
ZNF490-201ENST00000311437 ERICH6Q7L0X2 663 aa10.38□□□□□ -0.75
ZNF490-201ENST00000311437 ACIN1Q9UKV3 1341 aaKnown RBP10.33□□□□□ -0.75
ZNF490-201ENST00000311437 CCER1Q8TC90 406 aaPredicted RBP10.33□□□□□ -0.76
ZNF490-201ENST00000311437 EHMT2Q96KQ7 1210 aa10.31□□□□□ -0.76
ZNF490-201ENST00000311437 MYO15BQ96JP2 1530 aa10.23□□□□□ -0.77
ZNF490-201ENST00000311437 DIEXFQ68CQ4 756 aaKnown RBP10.2□□□□□ -0.78
ZNF490-201ENST00000311437 NEUROD1Q13562 356 aa10.18□□□□□ -0.78
ZNF490-201ENST00000311437 CHIC1Q5VXU3 224 aa10.14□□□□□ -0.79
ZNF490-201ENST00000311437 FAM9AQ8IZU1 332 aaPredicted RBP10.13□□□□□ -0.79
ZNF490-201ENST00000311437 BCL11AQ9H165 835 aa10.13□□□□□ -0.79
ZNF490-201ENST00000311437 LOC105371045A0A1W2PR82 267 aa10.12□□□□□ -0.79
ZNF490-201ENST00000311437 NEFLP07196 543 aa10.1□□□□□ -0.79
ZNF490-201ENST00000311437 CECR2Q9BXF3 1484 aa10.1□□□□□ -0.79
ZNF490-201ENST00000311437 SCRIBQ14160 1630 aa10.07□□□□□ -0.8
ZNF490-201ENST00000311437 ERCC6Q03468 1493 aa10.07□□□□□ -0.8
ZNF490-201ENST00000311437 DCAF1Q9Y4B6 1507 aa10.06□□□□□ -0.8
ZNF490-201ENST00000311437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.01□□□□□ -0.81
ZNF490-201ENST00000311437 ZCCHC6Q5VYS8 1495 aaKnown RBP10□□□□□ -0.81
ZNF490-201ENST00000311437 APLP2Q06481 763 aa9.99□□□□□ -0.81
ZNF490-201ENST00000311437 ANP32EQ9BTT0 268 aa9.99□□□□□ -0.81
ZNF490-201ENST00000311437 DNAJC5BQ9UF47 199 aa9.93□□□□□ -0.82
ZNF490-201ENST00000311437 BCANQ96GW7 911 aa9.91□□□□□ -0.82
ZNF490-201ENST00000311437 TRIM41Q8WV44 630 aa9.91□□□□□ -0.82
ZNF490-201ENST00000311437 RTL5Q5HYW3 569 aaPredicted RBP9.87□□□□□ -0.83
ZNF490-201ENST00000311437 ZNF316A6NFI3 1004 aaPredicted RBP9.85□□□□□ -0.83
ZNF490-201ENST00000311437 PDS5BQ9NTI5 1447 aa9.83□□□□□ -0.84
ZNF490-201ENST00000311437 RANGAP1P46060 587 aaPredicted RBP9.82□□□□□ -0.84
ZNF490-201ENST00000311437 CLSPNQ9HAW4 1339 aa9.81□□□□□ -0.84
ZNF490-201ENST00000311437 SMARCA2P51531 1590 aa9.79□□□□□ -0.84
ZNF490-201ENST00000311437 EIF4G1Q04637 1599 aaKnown RBP9.79□□□□□ -0.84
ZNF490-201ENST00000311437 EIF5BO60841 1220 aaKnown RBP9.79□□□□□ -0.84
ZNF490-201ENST00000311437 CSRNP3Q8WYN3 585 aa9.78□□□□□ -0.84
ZNF490-201ENST00000311437 PRKCSHP14314 528 aaPredicted RBP9.77□□□□□ -0.84
ZNF490-201ENST00000311437 CC2D2AQ9P2K1 1620 aa9.77□□□□□ -0.85
ZNF490-201ENST00000311437 MYT1LQ9UL68 1186 aa9.77□□□□□ -0.85
ZNF490-201ENST00000311437 ATP1B4Q9UN42 357 aaPredicted RBP9.77□□□□□ -0.85
ZNF490-201ENST00000311437 UBTFP17480 764 aaKnown RBP9.76□□□□□ -0.85
ZNF490-201ENST00000311437 BAZ1BQ9UIG0 1483 aaKnown RBP9.76□□□□□ -0.85
ZNF490-201ENST00000311437 CUX2O14529 1486 aa9.74□□□□□ -0.85
ZNF490-201ENST00000311437 CDK11AQ9UQ88 783 aaPredicted RBP9.73□□□□□ -0.85
ZNF490-201ENST00000311437 DNAJC5Q9H3Z4 198 aa9.72□□□□□ -0.85
ZNF490-201ENST00000311437 MIER1Q8N108 512 aa9.69□□□□□ -0.86
ZNF490-201ENST00000311437 FKBP8Q14318 412 aa9.68□□□□□ -0.86
ZNF490-201ENST00000311437 HNRNPUL2Q1KMD3 747 aaKnown RBP9.68□□□□□ -0.86
ZNF490-201ENST00000311437 AEBP2Q6ZN18 517 aaPredicted RBP9.67□□□□□ -0.86
ZNF490-201ENST00000311437 BAZ1AQ9NRL2 1556 aaPredicted RBP9.66□□□□□ -0.86
ZNF490-201ENST00000311437 OSCARQ8IYS5 282 aa9.65□□□□□ -0.86
ZNF490-201ENST00000311437 NPM1P06748 294 aaKnown RBP eCLIP9.65□□□□□ -0.86
ZNF490-201ENST00000311437 NCAPD3P42695 1498 aa9.64□□□□□ -0.87
ZNF490-201ENST00000311437 FBLN2P98095 1184 aa9.64□□□□□ -0.87
ZNF490-201ENST00000311437 DAXXQ9UER7 740 aaPredicted RBP9.63□□□□□ -0.87
ZNF490-201ENST00000311437 GLIPR1L2Q4G1C9 344 aa9.62□□□□□ -0.87
ZNF490-201ENST00000311437 NBR1Q14596 966 aa9.62□□□□□ -0.87
ZNF490-201ENST00000311437 SUPT16HQ9Y5B9 1047 aaKnown RBP9.62□□□□□ -0.87
ZNF490-201ENST00000311437 BICRAQ9NZM4 1560 aa9.62□□□□□ -0.87
ZNF490-201ENST00000311437 TRHP20396 242 aaPredicted RBP9.61□□□□□ -0.87
ZNF490-201ENST00000311437 UNC13AQ9UPW8 1703 aa9.6□□□□□ -0.87
ZNF490-201ENST00000311437 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
ZNF490-201ENST00000311437 ITGAEP38570 1179 aa9.56□□□□□ -0.88
ZNF490-201ENST00000311437 DEKP35659 375 aaKnown RBP9.55□□□□□ -0.88
ZNF490-201ENST00000311437 ATAD2BQ9ULI0 1458 aa9.55□□□□□ -0.88
ZNF490-201ENST00000311437 RTN4Q9NQC3 1192 aaKnown RBP9.55□□□□□ -0.88
ZNF490-201ENST00000311437 CADPSQ9ULU8 1353 aa9.54□□□□□ -0.88
ZNF490-201ENST00000311437 ANP32AP39687 249 aaKnown RBP9.54□□□□□ -0.88
ZNF490-201ENST00000311437 CHMP7Q8WUX9 453 aaPredicted RBP9.52□□□□□ -0.88
ZNF490-201ENST00000311437 HMGXB3Q12766 1538 aa9.52□□□□□ -0.89
ZNF490-201ENST00000311437 RBM19Q9Y4C8 960 aaKnown RBP9.52□□□□□ -0.89
ZNF490-201ENST00000311437 CEP164Q9UPV0 1460 aa9.52□□□□□ -0.89
ZNF490-201ENST00000311437 ABCC8Q09428 1581 aa9.5□□□□□ -0.89
ZNF490-201ENST00000311437 CCDC136Q96JN2 1154 aa9.47□□□□□ -0.89
ZNF490-201ENST00000311437 LAMC3Q9Y6N6 1575 aa9.46□□□□□ -0.89
ZNF490-201ENST00000311437 MRC2Q9UBG0 1479 aa9.46□□□□□ -0.89
ZNF490-201ENST00000311437 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.46□□□□□ -0.89
ZNF490-201ENST00000311437 ANP32CO43423 234 aa9.45□□□□□ -0.9
ZNF490-201ENST00000311437 ZBTB47Q9UFB7 747 aaPredicted RBP9.45□□□□□ -0.9
ZNF490-201ENST00000311437 ANO8Q9HCE9 1232 aaPredicted RBP9.44□□□□□ -0.9
ZNF490-201ENST00000311437 NPM2Q86SE8 214 aaKnown RBP9.42□□□□□ -0.9
ZNF490-201ENST00000311437 TRIM52Q96A61 297 aa9.41□□□□□ -0.9
ZNF490-201ENST00000311437 SMARCA4P51532 1647 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms