RNA–Protein interactions for RNA: ENST00000305921.7

PPM1D-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1D, Length 4,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-201ENST00000305921 RGS3P49796 1198 aa21.33■■□□□ 1.01
PPM1D-201ENST00000305921 KTN1Q86UP2 1357 aaKnown RBP21.33■■□□□ 1
PPM1D-201ENST00000305921 SAFB2Q14151 953 aaKnown RBP eCLIP21.32■■□□□ 1
PPM1D-201ENST00000305921 RUSC2Q8N2Y8 1516 aa21.32■■□□□ 1
PPM1D-201ENST00000305921 ROCK2O75116 1388 aaKnown RBP21.32■■□□□ 1
PPM1D-201ENST00000305921 B4GALNT3Q6L9W6 998 aa21.31■■□□□ 1
PPM1D-201ENST00000305921 ANP32EQ9BTT0 268 aa21.31■■□□□ 1
PPM1D-201ENST00000305921 CASC1Q6TDU7 716 aa21.31■■□□□ 1
PPM1D-201ENST00000305921 L3MBTL2Q969R5 705 aa21.31■■□□□ 1
PPM1D-201ENST00000305921 GOLGA6L22H0YM25 854 aa21.3■■□□□ 1
PPM1D-201ENST00000305921 FANCD2Q9BXW9 1451 aa21.29■■□□□ 1
PPM1D-201ENST00000305921 HNRNPMP52272 730 aaKnown RBP eCLIP21.29■■□□□ 1
PPM1D-201ENST00000305921 KIF3BO15066 747 aa21.27■■□□□ 1
PPM1D-201ENST00000305921 NCLP19338 710 aaKnown RBP21.26■□□□□ 0.99
PPM1D-201ENST00000305921 RALBP1Q15311 655 aa21.26■□□□□ 0.99
PPM1D-201ENST00000305921 STK26Q9P289 416 aa21.26■□□□□ 0.99
PPM1D-201ENST00000305921 TRHP20396 242 aaPredicted RBP21.25■□□□□ 0.99
PPM1D-201ENST00000305921 SPAG9O60271 1321 aaKnown RBP21.24■□□□□ 0.99
PPM1D-201ENST00000305921 HDGFL2Q7Z4V5 671 aaPredicted RBP21.23■□□□□ 0.99
PPM1D-201ENST00000305921 SOX12O15370 315 aa21.2■□□□□ 0.98
PPM1D-201ENST00000305921 DHX57Q6P158 1386 aaKnown RBP21.17■□□□□ 0.98
PPM1D-201ENST00000305921 EIF3AQ14152 1382 aaKnown RBP21.17■□□□□ 0.98
PPM1D-201ENST00000305921 ERICH6BQ5W0A0 696 aa21.16■□□□□ 0.98
PPM1D-201ENST00000305921 IGF1RP08069 1367 aa21.14■□□□□ 0.98
PPM1D-201ENST00000305921 U2AF1L5P0DN76 240 aaPredicted RBP21.14■□□□□ 0.97
PPM1D-201ENST00000305921 U2AF1Q01081 240 aaKnown RBP eCLIP21.14■□□□□ 0.97
PPM1D-201ENST00000305921 TRIM44Q96DX7 344 aaPredicted RBP21.12■□□□□ 0.97
PPM1D-201ENST00000305921 RCAN3Q9UKA8 241 aa21.12■□□□□ 0.97
PPM1D-201ENST00000305921 OS9Q13438 667 aaPredicted RBP21.12■□□□□ 0.97
PPM1D-201ENST00000305921 NOP58Q9Y2X3 529 aaKnown RBP21.11■□□□□ 0.97
PPM1D-201ENST00000305921 WASHC2CQ9Y4E1 1318 aa21.11■□□□□ 0.97
PPM1D-201ENST00000305921 NLRP13Q86W25 1043 aa21.1■□□□□ 0.97
PPM1D-201ENST00000305921 PTPRGP23470 1445 aa21.1■□□□□ 0.97
PPM1D-201ENST00000305921 FGD5Q6ZNL6 1462 aa21.1■□□□□ 0.97
PPM1D-201ENST00000305921 RTF1Q92541 710 aaKnown RBP21.09■□□□□ 0.97
PPM1D-201ENST00000305921 IPO8O15397 1037 aaKnown RBP21.08■□□□□ 0.97
PPM1D-201ENST00000305921 CALD1Q05682 793 aaKnown RBP21.06■□□□□ 0.96
PPM1D-201ENST00000305921 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
PPM1D-201ENST00000305921 TERF2IPQ9NYB0 399 aa21.05■□□□□ 0.96
PPM1D-201ENST00000305921 CCDC144AA2RUR9 1427 aa21.05■□□□□ 0.96
PPM1D-201ENST00000305921 NCAPD3P42695 1498 aa21.04■□□□□ 0.96
PPM1D-201ENST00000305921 HSP90AB1P08238 724 aaKnown RBP21.03■□□□□ 0.96
PPM1D-201ENST00000305921 ST20-MTHFSA0A0A6YYL1 179 aa21.02■□□□□ 0.96
PPM1D-201ENST00000305921 ZRSR1Q15695 479 aaKnown RBP21.02■□□□□ 0.96
PPM1D-201ENST00000305921 KCNJ4P48050 445 aa21■□□□□ 0.95
PPM1D-201ENST00000305921 PDE3BQ13370 1112 aa20.99■□□□□ 0.95
PPM1D-201ENST00000305921 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
PPM1D-201ENST00000305921 GOLGA2Q08379 1002 aa20.99■□□□□ 0.95
PPM1D-201ENST00000305921 PAK3O75914 559 aaPredicted RBP20.98■□□□□ 0.95
PPM1D-201ENST00000305921 FGD1P98174 961 aa20.97■□□□□ 0.95
PPM1D-201ENST00000305921 CFAP44Q96MT7 982 aa20.97■□□□□ 0.95
PPM1D-201ENST00000305921 RBM19Q9Y4C8 960 aaKnown RBP20.97■□□□□ 0.95
PPM1D-201ENST00000305921 PHLDB1Q86UU1 1377 aa20.97■□□□□ 0.95
PPM1D-201ENST00000305921 GLIPR1L2Q4G1C9 344 aa20.97■□□□□ 0.95
PPM1D-201ENST00000305921 HSCBQ8IWL3 235 aa20.97■□□□□ 0.95
PPM1D-201ENST00000305921 KIF15Q9NS87 1388 aa20.96■□□□□ 0.95
PPM1D-201ENST00000305921 NUTM2DQ5VT03 806 aaPredicted RBP20.96■□□□□ 0.95
PPM1D-201ENST00000305921 TRAK1Q9UPV9 953 aa20.96■□□□□ 0.95
PPM1D-201ENST00000305921 PTMAP06454 111 aaKnown RBP20.95■□□□□ 0.94
PPM1D-201ENST00000305921 RWDD1Q9H446 243 aaPredicted RBP20.95■□□□□ 0.94
PPM1D-201ENST00000305921 EID1Q9Y6B2 187 aa20.95■□□□□ 0.94
PPM1D-201ENST00000305921 MYOM3Q5VTT5 1437 aa20.94■□□□□ 0.94
PPM1D-201ENST00000305921 NPHP1O15259 732 aa20.94■□□□□ 0.94
PPM1D-201ENST00000305921 UACAQ9BZF9 1416 aa20.93■□□□□ 0.94
PPM1D-201ENST00000305921 MYBBP1AQ9BQG0 1328 aaKnown RBP20.93■□□□□ 0.94
PPM1D-201ENST00000305921 TCERG1O14776 1098 aaKnown RBP20.92■□□□□ 0.94
PPM1D-201ENST00000305921 CDK11BP21127 795 aaKnown RBP20.92■□□□□ 0.94
PPM1D-201ENST00000305921 TPRNQ4KMQ1 711 aa20.92■□□□□ 0.94
PPM1D-201ENST00000305921 ITPRIPQ8IWB1 547 aa20.92■□□□□ 0.94
PPM1D-201ENST00000305921 CHMP4AQ9BY43 222 aa20.91■□□□□ 0.94
PPM1D-201ENST00000305921 FGD6Q6ZV73 1430 aa20.91■□□□□ 0.94
PPM1D-201ENST00000305921 PANK3Q9H999 370 aa20.91■□□□□ 0.94
PPM1D-201ENST00000305921 MCCP23508 829 aa20.9■□□□□ 0.94
PPM1D-201ENST00000305921 PRKRIP1Q9H875 184 aaPredicted RBP20.9■□□□□ 0.94
PPM1D-201ENST00000305921 USP47Q96K76 1375 aa20.89■□□□□ 0.94
PPM1D-201ENST00000305921 CCDC146Q8IYE0 955 aa20.89■□□□□ 0.93
PPM1D-201ENST00000305921 VGFO15240 615 aaPredicted RBP20.89■□□□□ 0.93
PPM1D-201ENST00000305921 SMC4Q9NTJ3 1288 aa20.88■□□□□ 0.93
PPM1D-201ENST00000305921 KIF21BO75037 1637 aa20.87■□□□□ 0.93
PPM1D-201ENST00000305921 APBB1O00213 710 aa20.87■□□□□ 0.93
PPM1D-201ENST00000305921 NGDNQ8NEJ9 315 aaKnown RBP20.86■□□□□ 0.93
PPM1D-201ENST00000305921 PMFBP1Q8TBY8 1022 aa20.86■□□□□ 0.93
PPM1D-201ENST00000305921 STK31Q9BXU1 1019 aa20.86■□□□□ 0.93
PPM1D-201ENST00000305921 CSB-PGBD3P0DP91 1061 aa20.86■□□□□ 0.93
PPM1D-201ENST00000305921 CENPJQ9HC77 1338 aaPredicted RBP20.85■□□□□ 0.93
PPM1D-201ENST00000305921 LMOD3Q0VAK6 560 aa20.84■□□□□ 0.93
PPM1D-201ENST00000305921 OSCARQ8IYS5 282 aa20.84■□□□□ 0.93
PPM1D-201ENST00000305921 LRRC9Q6ZRR7 1453 aa20.83■□□□□ 0.92
PPM1D-201ENST00000305921 NAP1L2Q9ULW6 460 aaPredicted RBP20.83■□□□□ 0.92
PPM1D-201ENST00000305921 CUX1P39880 1505 aa20.83■□□□□ 0.92
PPM1D-201ENST00000305921 ZNF644Q9H582 1327 aaPredicted RBP20.83■□□□□ 0.92
PPM1D-201ENST00000305921 AQRO60306 1485 aaKnown RBP eCLIP20.82■□□□□ 0.92
PPM1D-201ENST00000305921 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.82■□□□□ 0.92
PPM1D-201ENST00000305921 CLUAP1Q96AJ1 413 aa20.82■□□□□ 0.92
PPM1D-201ENST00000305921 CASKIN1Q8WXD9 1431 aa20.8■□□□□ 0.92
PPM1D-201ENST00000305921 EVC2Q86UK5 1308 aa20.8■□□□□ 0.92
PPM1D-201ENST00000305921 CYB5RLQ6IPT4 315 aa20.8■□□□□ 0.92
PPM1D-201ENST00000305921 GOLGA6L4A6NEF3 574 aa20.79■□□□□ 0.92
PPM1D-201ENST00000305921 AMPHP49418 695 aa20.79■□□□□ 0.92
PPM1D-201ENST00000305921 PLCB2Q00722 1185 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms