RNA–Protein interactions for RNA: ENST00000303436.10

ARF4-201, Transcript of ADP ribosylation factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARF4, Length 1,660 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-201ENST00000303436 EFCAB2Q5VUJ9 269 aa20.45■□□□□ 0.86
ARF4-201ENST00000303436 ARAP3Q8WWN8 1544 aa20.44■□□□□ 0.86
ARF4-201ENST00000303436 TEX14Q8IWB6 1497 aa20.43■□□□□ 0.86
ARF4-201ENST00000303436 CDC42BPBQ9Y5S2 1711 aa20.42■□□□□ 0.86
ARF4-201ENST00000303436 ZNF777Q9ULD5 760 aaPredicted RBP20.42■□□□□ 0.86
ARF4-201ENST00000303436 FANCAO15360 1455 aa20.42■□□□□ 0.86
ARF4-201ENST00000303436 MIA2Q96PC5 1412 aa20.41■□□□□ 0.86
ARF4-201ENST00000303436 FGD6Q6ZV73 1430 aa20.4■□□□□ 0.86
ARF4-201ENST00000303436 CFAP74Q9C0B2 1584 aa20.4■□□□□ 0.86
ARF4-201ENST00000303436 PPRC1Q5VV67 1664 aaKnown RBP20.37■□□□□ 0.85
ARF4-201ENST00000303436 NEO1Q92859 1461 aa20.37■□□□□ 0.85
ARF4-201ENST00000303436 AKNAQ7Z591 1439 aa20.35■□□□□ 0.85
ARF4-201ENST00000303436 PLEKHH2Q8IVE3 1493 aa20.34■□□□□ 0.85
ARF4-201ENST00000303436 PTPN23Q9H3S7 1636 aa20.34■□□□□ 0.85
ARF4-201ENST00000303436 ZNF644Q9H582 1327 aaPredicted RBP20.33■□□□□ 0.85
ARF4-201ENST00000303436 CAMSAP2Q08AD1 1489 aa20.33■□□□□ 0.85
ARF4-201ENST00000303436 FAM50AQ14320 339 aaKnown RBP20.33■□□□□ 0.85
ARF4-201ENST00000303436 SAMD9LQ8IVG5 1584 aa20.32■□□□□ 0.84
ARF4-201ENST00000303436 ADGRL1O94910 1474 aa20.32■□□□□ 0.84
ARF4-201ENST00000303436 RRBP1Q9P2E9 1410 aaKnown RBP20.31■□□□□ 0.84
ARF4-201ENST00000303436 TCOF1Q13428 1488 aaKnown RBP20.3■□□□□ 0.84
ARF4-201ENST00000303436 SCAPERQ9BY12 1400 aa20.29■□□□□ 0.84
ARF4-201ENST00000303436 KIAA1107Q9UPP5 1409 aa20.29■□□□□ 0.84
ARF4-201ENST00000303436 ABCC1P33527 1531 aa20.28■□□□□ 0.84
ARF4-201ENST00000303436 HNRNPMP52272 730 aaKnown RBP eCLIP20.27■□□□□ 0.84
ARF4-201ENST00000303436 SYCP2Q9BX26 1530 aa20.27■□□□□ 0.84
ARF4-201ENST00000303436 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.26■□□□□ 0.83
ARF4-201ENST00000303436 RSPH4AQ5TD94 716 aa20.25■□□□□ 0.83
ARF4-201ENST00000303436 DENND4BO75064 1496 aaPredicted RBP20.25■□□□□ 0.83
ARF4-201ENST00000303436 ARHGEF12Q9NZN5 1544 aa20.23■□□□□ 0.83
ARF4-201ENST00000303436 MBD5Q9P267 1494 aa20.22■□□□□ 0.83
ARF4-201ENST00000303436 ARHGEF5Q12774 1597 aa20.21■□□□□ 0.83
ARF4-201ENST00000303436 POGZQ7Z3K3 1410 aa20.21■□□□□ 0.83
ARF4-201ENST00000303436 ZNF518AQ6AHZ1 1483 aa20.21■□□□□ 0.83
ARF4-201ENST00000303436 CCDC141Q6ZP82 1450 aa20.21■□□□□ 0.83
ARF4-201ENST00000303436 TRAPPC8Q9Y2L5 1435 aa20.2■□□□□ 0.82
ARF4-201ENST00000303436 RAPGEF3O95398 923 aa20.19■□□□□ 0.82
ARF4-201ENST00000303436 TSPY4P0CV99 314 aa20.19■□□□□ 0.82
ARF4-201ENST00000303436 TSPY10P0CW01 314 aa20.19■□□□□ 0.82
ARF4-201ENST00000303436 ITGAEP38570 1179 aa20.19■□□□□ 0.82
ARF4-201ENST00000303436 KDM6BO15054 1643 aa20.19■□□□□ 0.82
ARF4-201ENST00000303436 AFAP1Q8N556 730 aa20.19■□□□□ 0.82
ARF4-201ENST00000303436 DNMT1P26358 1616 aaKnown RBP20.18■□□□□ 0.82
ARF4-201ENST00000303436 DAPK1P53355 1430 aa20.18■□□□□ 0.82
ARF4-201ENST00000303436 TRIM26Q12899 539 aaPredicted RBP20.17■□□□□ 0.82
ARF4-201ENST00000303436 MYT1LQ9UL68 1186 aa20.17■□□□□ 0.82
ARF4-201ENST00000303436 COL17A1Q9UMD9 1497 aaPredicted RBP20.17■□□□□ 0.82
ARF4-201ENST00000303436 ABCC5O15440 1437 aa20.17■□□□□ 0.82
ARF4-201ENST00000303436 RICTORQ6R327 1708 aa20.16■□□□□ 0.82
ARF4-201ENST00000303436 SPAG9O60271 1321 aaKnown RBP20.15■□□□□ 0.82
ARF4-201ENST00000303436 KDM5CP41229 1560 aa20.13■□□□□ 0.81
ARF4-201ENST00000303436 CROCC2H7BZ55 1655 aa20.12■□□□□ 0.81
ARF4-201ENST00000303436 SHANK2Q9UPX8 1470 aa20.12■□□□□ 0.81
ARF4-201ENST00000303436 FRMPD1Q5SYB0 1578 aa20.12■□□□□ 0.81
ARF4-201ENST00000303436 C9orf84Q5VXU9 1444 aa20.12■□□□□ 0.81
ARF4-201ENST00000303436 CHIC2Q9UKJ5 165 aa20.11■□□□□ 0.81
ARF4-201ENST00000303436 RTEL1-TNFRSF6BF6WH68 1400 aa20.09■□□□□ 0.81
ARF4-201ENST00000303436 ZMYM4Q5VZL5 1548 aa20.09■□□□□ 0.81
ARF4-201ENST00000303436 HECW2Q9P2P5 1572 aa20.09■□□□□ 0.81
ARF4-201ENST00000303436 MLH3Q9UHC1 1453 aa20.09■□□□□ 0.81
ARF4-201ENST00000303436 MAST1Q9Y2H9 1570 aa20.08■□□□□ 0.81
ARF4-201ENST00000303436 MAGI2Q86UL8 1455 aa20.08■□□□□ 0.81
ARF4-201ENST00000303436 ATP7AQ04656 1500 aa20.08■□□□□ 0.8
ARF4-201ENST00000303436 PTPRKQ15262 1439 aa20.08■□□□□ 0.8
ARF4-201ENST00000303436 ANKRD30AQ9BXX3 1397 aa20.07■□□□□ 0.8
ARF4-201ENST00000303436 ZFYVE16Q7Z3T8 1539 aa20.07■□□□□ 0.8
ARF4-201ENST00000303436 INO80Q9ULG1 1556 aaPredicted RBP20.06■□□□□ 0.8
ARF4-201ENST00000303436 ADGBQ8N7X0 1667 aa20.05■□□□□ 0.8
ARF4-201ENST00000303436 KIDINS220Q9ULH0 1771 aa20.04■□□□□ 0.8
ARF4-201ENST00000303436 ROCK1Q13464 1354 aa20.04■□□□□ 0.8
ARF4-201ENST00000303436 ADGRL2O95490 1459 aa20.03■□□□□ 0.8
ARF4-201ENST00000303436 RRP7BPQ9NSQ0 103 aa20.02■□□□□ 0.8
ARF4-201ENST00000303436 NCOA1Q15788 1441 aa20.02■□□□□ 0.79
ARF4-201ENST00000303436 YEATS2Q9ULM3 1422 aa20.01■□□□□ 0.79
ARF4-201ENST00000303436 PLXNC1O60486 1568 aa20.01■□□□□ 0.79
ARF4-201ENST00000303436 KIF15Q9NS87 1388 aa20■□□□□ 0.79
ARF4-201ENST00000303436 ABCA6Q8N139 1617 aa19.98■□□□□ 0.79
ARF4-201ENST00000303436 ARHGEF40Q8TER5 1519 aa19.98■□□□□ 0.79
ARF4-201ENST00000303436 DIP2CQ9Y2E4 1556 aa19.98■□□□□ 0.79
ARF4-201ENST00000303436 PCGF6Q9BYE7 350 aa19.97■□□□□ 0.79
ARF4-201ENST00000303436 ATP10AO60312 1499 aa19.97■□□□□ 0.79
ARF4-201ENST00000303436 DUOX2Q9NRD8 1548 aa19.96■□□□□ 0.79
ARF4-201ENST00000303436 A2MP01023 1474 aa19.95■□□□□ 0.78
ARF4-201ENST00000303436 HFM1A2PYH4 1435 aa19.95■□□□□ 0.78
ARF4-201ENST00000303436 DHX29Q7Z478 1369 aaKnown RBP19.94■□□□□ 0.78
ARF4-201ENST00000303436 NAIPQ13075 1403 aa19.92■□□□□ 0.78
ARF4-201ENST00000303436 ANKRD50Q9ULJ7 1429 aa19.91■□□□□ 0.78
ARF4-201ENST00000303436 GCC2Q8IWJ2 1684 aa19.91■□□□□ 0.78
ARF4-201ENST00000303436 ERBINQ96RT1 1412 aa19.91■□□□□ 0.78
ARF4-201ENST00000303436 REREQ9P2R6 1566 aa19.9■□□□□ 0.78
ARF4-201ENST00000303436 SETD5Q9C0A6 1442 aa19.89■□□□□ 0.78
ARF4-201ENST00000303436 ARID4BQ4LE39 1312 aaPredicted RBP19.88■□□□□ 0.77
ARF4-201ENST00000303436 KIF3BO15066 747 aa19.86■□□□□ 0.77
ARF4-201ENST00000303436 EIF2AK4Q9P2K8 1649 aaKnown RBP19.85■□□□□ 0.77
ARF4-201ENST00000303436 AGLP35573 1532 aa19.84■□□□□ 0.77
ARF4-201ENST00000303436 RAB3GAP2Q9H2M9 1393 aa19.82■□□□□ 0.76
ARF4-201ENST00000303436 ACIN1Q9UKV3 1341 aaKnown RBP19.81■□□□□ 0.76
ARF4-201ENST00000303436 GGT6Q6P531 493 aa19.81■□□□□ 0.76
ARF4-201ENST00000303436 BCORL1Q5H9F3 1711 aa19.8■□□□□ 0.76
ARF4-201ENST00000303436 SIGLEC1Q9BZZ2 1709 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms