RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 CDCA8Q53HL2 280 aa19.63■□□□□ 0.73
DDB1-201ENST00000301764 WASHC2AQ641Q2 1341 aa19.63■□□□□ 0.73
DDB1-201ENST00000301764 NLRP13Q86W25 1043 aa19.62■□□□□ 0.73
DDB1-201ENST00000301764 MYH16Q9H6N6 1097 aa19.62■□□□□ 0.73
DDB1-201ENST00000301764 PTMAP06454 111 aaKnown RBP19.61■□□□□ 0.73
DDB1-201ENST00000301764 HSP90AB1P08238 724 aaKnown RBP19.61■□□□□ 0.73
DDB1-201ENST00000301764 TMF1P82094 1093 aa19.61■□□□□ 0.73
DDB1-201ENST00000301764 PRKCSHP14314 528 aaPredicted RBP19.61■□□□□ 0.73
DDB1-201ENST00000301764 PDE3BQ13370 1112 aa19.6■□□□□ 0.73
DDB1-201ENST00000301764 DNTTIP2Q5QJE6 756 aaKnown RBP19.6■□□□□ 0.73
DDB1-201ENST00000301764 HSCBQ8IWL3 235 aa19.59■□□□□ 0.73
DDB1-201ENST00000301764 CCDC18Q5T9S5 1454 aa19.58■□□□□ 0.72
DDB1-201ENST00000301764 PHLDB1Q86UU1 1377 aa19.58■□□□□ 0.72
DDB1-201ENST00000301764 CCDC184Q52MB2 194 aa19.57■□□□□ 0.72
DDB1-201ENST00000301764 CRBNQ96SW2 442 aa19.57■□□□□ 0.72
DDB1-201ENST00000301764 RSPH6AQ9H0K4 717 aa19.57■□□□□ 0.72
DDB1-201ENST00000301764 SENP3Q9H4L4 574 aaPredicted RBP19.57■□□□□ 0.72
DDB1-201ENST00000301764 GOLGA6L3A6NEY3 463 aa19.56■□□□□ 0.72
DDB1-201ENST00000301764 BRPF3Q9ULD4 1205 aa19.56■□□□□ 0.72
DDB1-201ENST00000301764 MS4A1P11836 297 aa19.56■□□□□ 0.72
DDB1-201ENST00000301764 TPRNQ4KMQ1 711 aa19.55■□□□□ 0.72
DDB1-201ENST00000301764 CFAP53Q96M91 514 aa19.55■□□□□ 0.72
DDB1-201ENST00000301764 NFKBIBQ15653 356 aa19.54■□□□□ 0.72
DDB1-201ENST00000301764 CHMP7Q8WUX9 453 aaPredicted RBP19.54■□□□□ 0.72
DDB1-201ENST00000301764 RRBP1Q9P2E9 1410 aaKnown RBP19.54■□□□□ 0.72
DDB1-201ENST00000301764 SMARCA2P51531 1590 aa19.54■□□□□ 0.72
DDB1-201ENST00000301764 FAM161AQ3B820 660 aa19.54■□□□□ 0.72
DDB1-201ENST00000301764 CCDC7Q96M83 1385 aa19.54■□□□□ 0.72
DDB1-201ENST00000301764 ST20-MTHFSA0A0A6YYL1 179 aa19.53■□□□□ 0.72
DDB1-201ENST00000301764 KIF7Q2M1P5 1343 aa19.52■□□□□ 0.72
DDB1-201ENST00000301764 MYBBP1AQ9BQG0 1328 aaKnown RBP19.52■□□□□ 0.72
DDB1-201ENST00000301764 GOLGA2Q08379 1002 aa19.51■□□□□ 0.71
DDB1-201ENST00000301764 MSNP26038 577 aaKnown RBP19.51■□□□□ 0.71
DDB1-201ENST00000301764 ROCK2O75116 1388 aaKnown RBP19.5■□□□□ 0.71
DDB1-201ENST00000301764 CNTLNQ9NXG0 1405 aa19.5■□□□□ 0.71
DDB1-201ENST00000301764 VSIG10Q8N0Z9 540 aa19.49■□□□□ 0.71
DDB1-201ENST00000301764 WDR97A6NE52 1622 aa19.49■□□□□ 0.71
DDB1-201ENST00000301764 ARAP1Q96P48 1450 aa19.49■□□□□ 0.71
DDB1-201ENST00000301764 AKNAQ7Z591 1439 aa19.49■□□□□ 0.71
DDB1-201ENST00000301764 SMARCA4P51532 1647 aa19.49■□□□□ 0.71
DDB1-201ENST00000301764 CENPQQ7L2Z9 268 aaPredicted RBP19.49■□□□□ 0.71
DDB1-201ENST00000301764 KIF15Q9NS87 1388 aa19.49■□□□□ 0.71
DDB1-201ENST00000301764 ARID3AQ99856 593 aa19.48■□□□□ 0.71
DDB1-201ENST00000301764 HSP90AA2PQ14568 343 aaPredicted RBP19.48■□□□□ 0.71
DDB1-201ENST00000301764 CCDC146Q8IYE0 955 aa19.46■□□□□ 0.71
DDB1-201ENST00000301764 NUP155O75694 1391 aa19.46■□□□□ 0.71
DDB1-201ENST00000301764 EIF4G1Q04637 1599 aaKnown RBP19.46■□□□□ 0.71
DDB1-201ENST00000301764 MFAP1P55081 439 aaKnown RBP19.46■□□□□ 0.71
DDB1-201ENST00000301764 USP47Q96K76 1375 aa19.45■□□□□ 0.7
DDB1-201ENST00000301764 CLUAP1Q96AJ1 413 aa19.45■□□□□ 0.7
DDB1-201ENST00000301764 PLCB2Q00722 1185 aa19.44■□□□□ 0.7
DDB1-201ENST00000301764 UACAQ9BZF9 1416 aa19.43■□□□□ 0.7
DDB1-201ENST00000301764 U2SURPO15042 1029 aaKnown RBP19.42■□□□□ 0.7
DDB1-201ENST00000301764 MAPK8IP3Q9UPT6 1336 aa19.42■□□□□ 0.7
DDB1-201ENST00000301764 ZBTB7CA1YPR0 619 aa19.41■□□□□ 0.7
DDB1-201ENST00000301764 GBP4Q96PP9 640 aa19.41■□□□□ 0.7
DDB1-201ENST00000301764 RWDD1Q9H446 243 aaPredicted RBP19.41■□□□□ 0.7
DDB1-201ENST00000301764 LRRC9Q6ZRR7 1453 aa19.4■□□□□ 0.7
DDB1-201ENST00000301764 STAG3Q9UJ98 1225 aa19.38■□□□□ 0.69
DDB1-201ENST00000301764 FRAT2O75474 233 aaPredicted RBP19.38■□□□□ 0.69
DDB1-201ENST00000301764 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
DDB1-201ENST00000301764 FGD6Q6ZV73 1430 aa19.37■□□□□ 0.69
DDB1-201ENST00000301764 CDCA7LQ96GN5 454 aa19.37■□□□□ 0.69
DDB1-201ENST00000301764 BACH2Q9BYV9 841 aa19.37■□□□□ 0.69
DDB1-201ENST00000301764 PANK3Q9H999 370 aa19.37■□□□□ 0.69
DDB1-201ENST00000301764 PMFBP1Q8TBY8 1022 aa19.36■□□□□ 0.69
DDB1-201ENST00000301764 MORC1Q86VD1 984 aa19.36■□□□□ 0.69
DDB1-201ENST00000301764 CASC1Q6TDU7 716 aa19.35■□□□□ 0.69
DDB1-201ENST00000301764 FOXD4L1Q9NU39 408 aa19.35■□□□□ 0.69
DDB1-201ENST00000301764 ATAD2BQ9ULI0 1458 aa19.35■□□□□ 0.69
DDB1-201ENST00000301764 CENPJQ9HC77 1338 aaPredicted RBP19.34■□□□□ 0.69
DDB1-201ENST00000301764 IGF1RP08069 1367 aa19.34■□□□□ 0.69
DDB1-201ENST00000301764 COG6Q9Y2V7 657 aa19.33■□□□□ 0.68
DDB1-201ENST00000301764 ITPRIPQ8IWB1 547 aa19.32■□□□□ 0.68
DDB1-201ENST00000301764 BCL2L13Q9BXK5 485 aa19.31■□□□□ 0.68
DDB1-201ENST00000301764 SYNJ1O43426 1573 aa19.3■□□□□ 0.68
DDB1-201ENST00000301764 ANKRD30AQ9BXX3 1397 aa19.3■□□□□ 0.68
DDB1-201ENST00000301764 NBPF8Q3BBV2 869 aa19.29■□□□□ 0.68
DDB1-201ENST00000301764 U2AF1L5P0DN76 240 aaPredicted RBP19.27■□□□□ 0.68
DDB1-201ENST00000301764 U2AF1Q01081 240 aaKnown RBP eCLIP19.27■□□□□ 0.681e-7■■□□□ 13.6
DDB1-201ENST00000301764 PNISRQ8TF01 805 aaKnown RBP19.27■□□□□ 0.68
DDB1-201ENST00000301764 APAF1O14727 1248 aa19.27■□□□□ 0.67
DDB1-201ENST00000301764 RRP7AQ9Y3A4 280 aaKnown RBP19.26■□□□□ 0.67
DDB1-201ENST00000301764 SMG6Q86US8 1419 aaKnown RBP19.26■□□□□ 0.67
DDB1-201ENST00000301764 CHMP4BQ9H444 224 aaKnown RBP19.25■□□□□ 0.67
DDB1-201ENST00000301764 APBB1O00213 710 aa19.24■□□□□ 0.67
DDB1-201ENST00000301764 SMC4Q9NTJ3 1288 aa19.24■□□□□ 0.67
DDB1-201ENST00000301764 DDX11L8A8MPP1 907 aa19.24■□□□□ 0.67
DDB1-201ENST00000301764 SKAP1Q86WV1 359 aa19.24■□□□□ 0.67
DDB1-201ENST00000301764 CGNL1Q0VF96 1302 aa19.23■□□□□ 0.67
DDB1-201ENST00000301764 C11orf95C9JLR9 678 aaPredicted RBP19.23■□□□□ 0.67
DDB1-201ENST00000301764 CALD1Q05682 793 aaKnown RBP19.22■□□□□ 0.67
DDB1-201ENST00000301764 PTMSP20962 102 aa19.22■□□□□ 0.67
DDB1-201ENST00000301764 MYOM3Q5VTT5 1437 aa19.22■□□□□ 0.67
DDB1-201ENST00000301764 PRXQ9BXM0 1461 aa19.21■□□□□ 0.67
DDB1-201ENST00000301764 IPO8O15397 1037 aaKnown RBP19.2■□□□□ 0.66
DDB1-201ENST00000301764 BRD4O60885 1362 aaPredicted RBP19.2■□□□□ 0.66
DDB1-201ENST00000301764 ZNF644Q9H582 1327 aaPredicted RBP19.19■□□□□ 0.66
DDB1-201ENST00000301764 ERICH3Q5RHP9 1530 aa19.19■□□□□ 0.66
DDB1-201ENST00000301764 E9PSI1 815 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms