RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 STK26Q9P289 416 aa19.27■□□□□ 0.67
CDH23-202ENST00000299366 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.26■□□□□ 0.67
CDH23-202ENST00000299366 WDR97A6NE52 1622 aa19.25■□□□□ 0.67
CDH23-202ENST00000299366 CLUAP1Q96AJ1 413 aa19.25■□□□□ 0.67
CDH23-202ENST00000299366 FMN1Q68DA7 1419 aa19.24■□□□□ 0.67
CDH23-202ENST00000299366 PAK3O75914 559 aaPredicted RBP19.24■□□□□ 0.67
CDH23-202ENST00000299366 CADPSQ9ULU8 1353 aa19.24■□□□□ 0.67
CDH23-202ENST00000299366 IGF1RP08069 1367 aa19.23■□□□□ 0.67
CDH23-202ENST00000299366 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
CDH23-202ENST00000299366 SLKQ9H2G2 1235 aaPredicted RBP19.23■□□□□ 0.67
CDH23-202ENST00000299366 ROCK2O75116 1388 aaKnown RBP19.22■□□□□ 0.67
CDH23-202ENST00000299366 MLECQ14165 292 aa19.22■□□□□ 0.67
CDH23-202ENST00000299366 ANP32BQ92688 251 aaKnown RBP19.22■□□□□ 0.67
CDH23-202ENST00000299366 DDRGK1Q96HY6 314 aa19.22■□□□□ 0.67
CDH23-202ENST00000299366 NCLP19338 710 aaKnown RBP19.21■□□□□ 0.67
CDH23-202ENST00000299366 NUDCQ9Y266 331 aa19.21■□□□□ 0.67
CDH23-202ENST00000299366 CFAP53Q96M91 514 aa19.2■□□□□ 0.66
CDH23-202ENST00000299366 ERCC6Q03468 1493 aa19.19■□□□□ 0.66
CDH23-202ENST00000299366 EXOC6Q8TAG9 804 aa19.19■□□□□ 0.66
CDH23-202ENST00000299366 RRBP1Q9P2E9 1410 aaKnown RBP19.19■□□□□ 0.66
CDH23-202ENST00000299366 CDCA8Q53HL2 280 aa19.18■□□□□ 0.66
CDH23-202ENST00000299366 POGKQ9P215 609 aa19.18■□□□□ 0.66
CDH23-202ENST00000299366 BECN1Q14457 450 aa19.18■□□□□ 0.66
CDH23-202ENST00000299366 RRP7AQ9Y3A4 280 aaKnown RBP19.17■□□□□ 0.66
CDH23-202ENST00000299366 APBB1O00213 710 aa19.17■□□□□ 0.66
CDH23-202ENST00000299366 BCL2L13Q9BXK5 485 aa19.17■□□□□ 0.66
CDH23-202ENST00000299366 RAD54L2Q9Y4B4 1467 aa19.17■□□□□ 0.66
CDH23-202ENST00000299366 MORC1Q86VD1 984 aa19.15■□□□□ 0.66
CDH23-202ENST00000299366 MYH16Q9H6N6 1097 aa19.15■□□□□ 0.66
CDH23-202ENST00000299366 KTN1Q86UP2 1357 aaKnown RBP19.15■□□□□ 0.66
CDH23-202ENST00000299366 SRPK2P78362 688 aaKnown RBP19.15■□□□□ 0.66
CDH23-202ENST00000299366 MAPK8IP3Q9UPT6 1336 aa19.15■□□□□ 0.66
CDH23-202ENST00000299366 WASHC2AQ641Q2 1341 aa19.14■□□□□ 0.65
CDH23-202ENST00000299366 GZF1Q9H116 711 aaPredicted RBP19.14■□□□□ 0.65
CDH23-202ENST00000299366 ARID4BQ4LE39 1312 aaPredicted RBP19.13■□□□□ 0.65
CDH23-202ENST00000299366 IPO9Q96P70 1041 aaKnown RBP19.12■□□□□ 0.65
CDH23-202ENST00000299366 CCDC18Q5T9S5 1454 aa19.12■□□□□ 0.65
CDH23-202ENST00000299366 PANK3Q9H999 370 aa19.12■□□□□ 0.65
CDH23-202ENST00000299366 ANO8Q9HCE9 1232 aaPredicted RBP19.12■□□□□ 0.65
CDH23-202ENST00000299366 U2AF1L5P0DN76 240 aaPredicted RBP19.11■□□□□ 0.65
CDH23-202ENST00000299366 U2AF1Q01081 240 aaKnown RBP eCLIP19.11■□□□□ 0.65
CDH23-202ENST00000299366 A0A0G2JS52 829 aa19.1■□□□□ 0.65
CDH23-202ENST00000299366 KIF3BO15066 747 aa19.09■□□□□ 0.65
CDH23-202ENST00000299366 JPH4Q96JJ6 628 aa19.09■□□□□ 0.65
CDH23-202ENST00000299366 TAOK2Q9UL54 1235 aa19.08■□□□□ 0.65
CDH23-202ENST00000299366 NLRP13Q86W25 1043 aa19.08■□□□□ 0.65
CDH23-202ENST00000299366 KIF7Q2M1P5 1343 aa19.07■□□□□ 0.64
CDH23-202ENST00000299366 ERICH6BQ5W0A0 696 aa19.07■□□□□ 0.64
CDH23-202ENST00000299366 LMOD2Q6P5Q4 547 aa19.06■□□□□ 0.64
CDH23-202ENST00000299366 TRAK1Q9UPV9 953 aa19.05■□□□□ 0.64
CDH23-202ENST00000299366 ANKRD30AQ9BXX3 1397 aa19.05■□□□□ 0.64
CDH23-202ENST00000299366 IL27Q8NEV9 243 aa19.05■□□□□ 0.64
CDH23-202ENST00000299366 USP47Q96K76 1375 aa19.04■□□□□ 0.64
CDH23-202ENST00000299366 FGD5Q6ZNL6 1462 aa19.03■□□□□ 0.64
CDH23-202ENST00000299366 NUTM2FA1L443 756 aa19.03■□□□□ 0.64
CDH23-202ENST00000299366 RALBP1Q15311 655 aa19.03■□□□□ 0.64
CDH23-202ENST00000299366 TRIM44Q96DX7 344 aaPredicted RBP19.03■□□□□ 0.64
CDH23-202ENST00000299366 CDCA7LQ96GN5 454 aa19.02■□□□□ 0.64
CDH23-202ENST00000299366 CRBNQ96SW2 442 aa19.02■□□□□ 0.64
CDH23-202ENST00000299366 NBPF8Q3BBV2 869 aa19.02■□□□□ 0.63
CDH23-202ENST00000299366 PDS5BQ9NTI5 1447 aa19.02■□□□□ 0.63
CDH23-202ENST00000299366 ZBED9Q6R2W3 1325 aa19■□□□□ 0.63
CDH23-202ENST00000299366 FANCD2Q9BXW9 1451 aa19■□□□□ 0.63
CDH23-202ENST00000299366 ELL2O00472 640 aaPredicted RBP19■□□□□ 0.63
CDH23-202ENST00000299366 PRXQ9BXM0 1461 aa19■□□□□ 0.63
CDH23-202ENST00000299366 PDE4AP27815 886 aa19■□□□□ 0.63
CDH23-202ENST00000299366 GOLGA2Q08379 1002 aa19■□□□□ 0.63
CDH23-202ENST00000299366 FOXD4L1Q9NU39 408 aa18.99■□□□□ 0.63
CDH23-202ENST00000299366 TCERG1O14776 1098 aaKnown RBP18.99■□□□□ 0.63
CDH23-202ENST00000299366 LRRC9Q6ZRR7 1453 aa18.98■□□□□ 0.63
CDH23-202ENST00000299366 APAF1O14727 1248 aa18.98■□□□□ 0.63
CDH23-202ENST00000299366 FGD6Q6ZV73 1430 aa18.98■□□□□ 0.63
CDH23-202ENST00000299366 AKNAQ7Z591 1439 aa18.98■□□□□ 0.63
CDH23-202ENST00000299366 NAP1L5Q96NT1 182 aaPredicted RBP18.97■□□□□ 0.63
CDH23-202ENST00000299366 C11orf95C9JLR9 678 aaPredicted RBP18.97■□□□□ 0.63
CDH23-202ENST00000299366 PLCB2Q00722 1185 aa18.97■□□□□ 0.63
CDH23-202ENST00000299366 ITPRIPQ8IWB1 547 aa18.96■□□□□ 0.63
CDH23-202ENST00000299366 HSP90AB1P08238 724 aaKnown RBP18.96■□□□□ 0.63
CDH23-202ENST00000299366 MAPKBP1O60336 1514 aa18.96■□□□□ 0.63
CDH23-202ENST00000299366 RRP1P56182 461 aaKnown RBP18.96■□□□□ 0.63
CDH23-202ENST00000299366 MFAP1P55081 439 aaKnown RBP18.95■□□□□ 0.62
CDH23-202ENST00000299366 COG6Q9Y2V7 657 aa18.95■□□□□ 0.62
CDH23-202ENST00000299366 CCDC7Q96M83 1385 aa18.95■□□□□ 0.62
CDH23-202ENST00000299366 SKAP1Q86WV1 359 aa18.95■□□□□ 0.62
CDH23-202ENST00000299366 NESP48681 1621 aa18.95■□□□□ 0.62
CDH23-202ENST00000299366 EFCAB2Q5VUJ9 269 aa18.93■□□□□ 0.62
CDH23-202ENST00000299366 MYBBP1AQ9BQG0 1328 aaKnown RBP18.93■□□□□ 0.62
CDH23-202ENST00000299366 NBPF1Q3BBV0 1214 aa18.91■□□□□ 0.62
CDH23-202ENST00000299366 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.9■□□□□ 0.62
CDH23-202ENST00000299366 PRKCSHP14314 528 aaPredicted RBP18.9■□□□□ 0.62
CDH23-202ENST00000299366 SMC4Q9NTJ3 1288 aa18.9■□□□□ 0.62
CDH23-202ENST00000299366 CARMIL2Q6F5E8 1435 aa18.89■□□□□ 0.61
CDH23-202ENST00000299366 GOLGA6L22H0YM25 854 aa18.89■□□□□ 0.61
CDH23-202ENST00000299366 AQRO60306 1485 aaKnown RBP eCLIP18.89■□□□□ 0.61
CDH23-202ENST00000299366 CFTRP13569 1480 aa18.88■□□□□ 0.61
CDH23-202ENST00000299366 ARID3AQ99856 593 aa18.87■□□□□ 0.61
CDH23-202ENST00000299366 KIF15Q9NS87 1388 aa18.87■□□□□ 0.61
CDH23-202ENST00000299366 SPAG9O60271 1321 aaKnown RBP18.86■□□□□ 0.61
CDH23-202ENST00000299366 UACAQ9BZF9 1416 aa18.86■□□□□ 0.61
CDH23-202ENST00000299366 PTMAP06454 111 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms