RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 SMG6Q86US8 1419 aaKnown RBP15.14■□□□□ 0.01
TRUB1-201ENST00000298746 PTPN23Q9H3S7 1636 aa15.14■□□□□ 0.01
TRUB1-201ENST00000298746 SLC4A3P48751 1232 aa15.13■□□□□ 0.01
TRUB1-201ENST00000298746 NCOA1Q15788 1441 aa15.12■□□□□ 0.01
TRUB1-201ENST00000298746 RRP1P56182 461 aaKnown RBP15.11■□□□□ 0.01
TRUB1-201ENST00000298746 NCAPD3P42695 1498 aa15.11■□□□□ 0.01
TRUB1-201ENST00000298746 CARD11Q9BXL7 1154 aa15.11■□□□□ 0.01
TRUB1-201ENST00000298746 RAD54L2Q9Y4B4 1467 aa15.11■□□□□ 0.01
TRUB1-201ENST00000298746 PLIN1O60240 522 aa15.11■□□□□ 0.01
TRUB1-201ENST00000298746 CADPSQ9ULU8 1353 aa15.1■□□□□ 0.01
TRUB1-201ENST00000298746 SKAP1Q86WV1 359 aa15.09■□□□□ 0.01
TRUB1-201ENST00000298746 DDRGK1Q96HY6 314 aa15.09■□□□□ 0.01
TRUB1-201ENST00000298746 BRPF3Q9ULD4 1205 aa15.09■□□□□ 0.01
TRUB1-201ENST00000298746 USP35Q9P2H5 1018 aa15.08■□□□□ 0
TRUB1-201ENST00000298746 CFAP43Q8NDM7 1665 aa15.08■□□□□ 0
TRUB1-201ENST00000298746 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
TRUB1-201ENST00000298746 TDRD9Q8NDG6 1382 aaKnown RBP15.06■□□□□ 0
TRUB1-201ENST00000298746 USP47Q96K76 1375 aa15.05■□□□□ 0
TRUB1-201ENST00000298746 BACH2Q9BYV9 841 aa15.05■□□□□ -0
TRUB1-201ENST00000298746 GSE1Q14687 1217 aa15.03■□□□□ -0
TRUB1-201ENST00000298746 ARXQ96QS3 562 aa15.03■□□□□ -0
TRUB1-201ENST00000298746 RGS3P49796 1198 aa15.02■□□□□ -0
TRUB1-201ENST00000298746 PKD2Q13563 968 aa15.02■□□□□ -0
TRUB1-201ENST00000298746 CDCA7LQ96GN5 454 aa15.02■□□□□ -0
TRUB1-201ENST00000298746 ZNF644Q9H582 1327 aaPredicted RBP15.02■□□□□ -0
TRUB1-201ENST00000298746 CC2D1BQ5T0F9 858 aaKnown RBP15.02□□□□□ -0.01
TRUB1-201ENST00000298746 EFCAB5A4FU69 1503 aa15.01□□□□□ -0.01
TRUB1-201ENST00000298746 ST20-MTHFSA0A0A6YYL1 179 aa15□□□□□ -0.01
TRUB1-201ENST00000298746 NFKBIBQ15653 356 aa15□□□□□ -0.01
TRUB1-201ENST00000298746 HMGXB3Q12766 1538 aa15□□□□□ -0.01
TRUB1-201ENST00000298746 CRBNQ96SW2 442 aa14.99□□□□□ -0.01
TRUB1-201ENST00000298746 MS4A1P11836 297 aa14.99□□□□□ -0.01
TRUB1-201ENST00000298746 DCAF11Q8TEB1 546 aa14.98□□□□□ -0.01
TRUB1-201ENST00000298746 MYBBP1AQ9BQG0 1328 aaKnown RBP14.98□□□□□ -0.01
TRUB1-201ENST00000298746 RNF123Q5XPI4 1314 aa14.97□□□□□ -0.01
TRUB1-201ENST00000298746 ANKRD30BQ9BXX2 1392 aa14.97□□□□□ -0.01
TRUB1-201ENST00000298746 FRAT1Q92837 279 aaPredicted RBP14.97□□□□□ -0.01
TRUB1-201ENST00000298746 KDM5BQ9UGL1 1544 aa14.97□□□□□ -0.01
TRUB1-201ENST00000298746 FANCD2Q9BXW9 1451 aa14.96□□□□□ -0.01
TRUB1-201ENST00000298746 RALBP1Q15311 655 aa14.96□□□□□ -0.01
TRUB1-201ENST00000298746 RGL3Q3MIN7 710 aa14.96□□□□□ -0.01
TRUB1-201ENST00000298746 CFDP1Q9UEE9 299 aaPredicted RBP14.96□□□□□ -0.01
TRUB1-201ENST00000298746 KIF15Q9NS87 1388 aa14.96□□□□□ -0.01
TRUB1-201ENST00000298746 SUPT6HQ7KZ85 1726 aaKnown RBP14.94□□□□□ -0.02
TRUB1-201ENST00000298746 NLRP13Q86W25 1043 aa14.94□□□□□ -0.02
TRUB1-201ENST00000298746 DHX29Q7Z478 1369 aaKnown RBP14.93□□□□□ -0.02
TRUB1-201ENST00000298746 RPRD2Q5VT52 1461 aaKnown RBP14.92□□□□□ -0.02
TRUB1-201ENST00000298746 PDE3BQ13370 1112 aa14.92□□□□□ -0.02
TRUB1-201ENST00000298746 EHBP1L1Q8N3D4 1523 aa14.91□□□□□ -0.02
TRUB1-201ENST00000298746 SNAPC4Q5SXM2 1469 aa14.91□□□□□ -0.02
TRUB1-201ENST00000298746 ROCK2O75116 1388 aaKnown RBP14.91□□□□□ -0.02
TRUB1-201ENST00000298746 KTN1Q86UP2 1357 aaKnown RBP14.91□□□□□ -0.02
TRUB1-201ENST00000298746 FRAT2O75474 233 aaPredicted RBP14.89□□□□□ -0.03
TRUB1-201ENST00000298746 POLA1P09884 1462 aaPredicted RBP14.89□□□□□ -0.03
TRUB1-201ENST00000298746 WDR43Q15061 677 aaKnown RBP eCLIP14.89□□□□□ -0.03
TRUB1-201ENST00000298746 BRD4O60885 1362 aaPredicted RBP14.88□□□□□ -0.03
TRUB1-201ENST00000298746 KDM6BO15054 1643 aa14.88□□□□□ -0.03
TRUB1-201ENST00000298746 CANXP27824 592 aaKnown RBP14.87□□□□□ -0.03
TRUB1-201ENST00000298746 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.87□□□□□ -0.03
TRUB1-201ENST00000298746 DENND4BO75064 1496 aaPredicted RBP14.87□□□□□ -0.03
TRUB1-201ENST00000298746 SPATA31E1Q6ZUB1 1445 aa14.87□□□□□ -0.03
TRUB1-201ENST00000298746 MIA2Q96PC5 1412 aa14.87□□□□□ -0.03
TRUB1-201ENST00000298746 C20orf194Q5TEA3 1177 aa14.86□□□□□ -0.03
TRUB1-201ENST00000298746 SLKQ9H2G2 1235 aaPredicted RBP14.86□□□□□ -0.03
TRUB1-201ENST00000298746 WASHC2CQ9Y4E1 1318 aa14.86□□□□□ -0.03
TRUB1-201ENST00000298746 NUP155O75694 1391 aa14.85□□□□□ -0.03
TRUB1-201ENST00000298746 FAM161AQ3B820 660 aa14.85□□□□□ -0.03
TRUB1-201ENST00000298746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.85□□□□□ -0.031e-6■■■■□ 24.4
TRUB1-201ENST00000298746 ARID4BQ4LE39 1312 aaPredicted RBP14.84□□□□□ -0.03
TRUB1-201ENST00000298746 UGGT2Q9NYU1 1516 aa14.84□□□□□ -0.03
TRUB1-201ENST00000298746 GRIN2BQ13224 1484 aa14.84□□□□□ -0.03
TRUB1-201ENST00000298746 CDK13Q14004 1512 aaKnown RBP14.84□□□□□ -0.03
TRUB1-201ENST00000298746 TSPY4P0CV99 314 aa14.83□□□□□ -0.03
TRUB1-201ENST00000298746 TSPY10P0CW01 314 aa14.83□□□□□ -0.03
TRUB1-201ENST00000298746 ABCA10Q8WWZ4 1543 aa14.83□□□□□ -0.03
TRUB1-201ENST00000298746 HECW1Q76N89 1606 aa14.82□□□□□ -0.04
TRUB1-201ENST00000298746 DAPK1P53355 1430 aa14.82□□□□□ -0.04
TRUB1-201ENST00000298746 TEX14Q8IWB6 1497 aa14.82□□□□□ -0.04
TRUB1-201ENST00000298746 CENPQQ7L2Z9 268 aaPredicted RBP14.82□□□□□ -0.04
TRUB1-201ENST00000298746 TOPBP1Q92547 1522 aa14.82□□□□□ -0.04
TRUB1-201ENST00000298746 GAPVD1Q14C86 1478 aa14.81□□□□□ -0.04
TRUB1-201ENST00000298746 FBLN2P98095 1184 aa14.8□□□□□ -0.04
TRUB1-201ENST00000298746 PANK3Q9H999 370 aa14.8□□□□□ -0.04
TRUB1-201ENST00000298746 SPRYD3Q8NCJ5 442 aa14.79□□□□□ -0.04
TRUB1-201ENST00000298746 ABCC5O15440 1437 aa14.79□□□□□ -0.04
TRUB1-201ENST00000298746 EPRSP07814 1512 aaKnown RBP14.78□□□□□ -0.04
TRUB1-201ENST00000298746 MAGI3Q5TCQ9 1506 aa14.78□□□□□ -0.04
TRUB1-201ENST00000298746 NESP48681 1621 aa14.78□□□□□ -0.04
TRUB1-201ENST00000298746 BECN1Q14457 450 aa14.78□□□□□ -0.04
TRUB1-201ENST00000298746 CTTNBP2Q8WZ74 1663 aa14.77□□□□□ -0.04
TRUB1-201ENST00000298746 ADAMTS8Q9UP79 889 aa14.77□□□□□ -0.04
TRUB1-201ENST00000298746 KIAA1107Q9UPP5 1409 aa14.77□□□□□ -0.05
TRUB1-201ENST00000298746 KNSTRNQ9Y448 316 aa14.77□□□□□ -0.05
TRUB1-201ENST00000298746 UPF2Q9HAU5 1272 aaKnown RBP14.76□□□□□ -0.05
TRUB1-201ENST00000298746 LRPPRCP42704 1394 aaKnown RBP14.76□□□□□ -0.05
TRUB1-201ENST00000298746 ANKRD30AQ9BXX3 1397 aa14.76□□□□□ -0.05
TRUB1-201ENST00000298746 CCDC146Q8IYE0 955 aa14.76□□□□□ -0.05
TRUB1-201ENST00000298746 NAP1L5Q96NT1 182 aaPredicted RBP14.76□□□□□ -0.05
TRUB1-201ENST00000298746 RSPH6AQ9H0K4 717 aa14.76□□□□□ -0.05
TRUB1-201ENST00000298746 GZF1Q9H116 711 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms