RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 FHOD3Q2V2M9 1422 aa21.8■■□□□ 1.08
SBSPON-201ENST00000297354 NBPF8Q3BBV2 869 aa21.78■■□□□ 1.08
SBSPON-201ENST00000297354 RGL3Q3MIN7 710 aa21.77■■□□□ 1.08
SBSPON-201ENST00000297354 CARMIL1Q5VZK9 1371 aa21.77■■□□□ 1.08
SBSPON-201ENST00000297354 HSP90AA2PQ14568 343 aaPredicted RBP21.76■■□□□ 1.07
SBSPON-201ENST00000297354 HSP90AA1P07900 732 aaKnown RBP21.75■■□□□ 1.07
SBSPON-201ENST00000297354 CUX2O14529 1486 aa21.75■■□□□ 1.07
SBSPON-201ENST00000297354 BICRAQ9NZM4 1560 aa21.73■■□□□ 1.07
SBSPON-201ENST00000297354 UPF2Q9HAU5 1272 aaKnown RBP21.73■■□□□ 1.07
SBSPON-201ENST00000297354 POGKQ9P215 609 aa21.71■■□□□ 1.07
SBSPON-201ENST00000297354 LRRC9Q6ZRR7 1453 aa21.71■■□□□ 1.07
SBSPON-201ENST00000297354 BECN1Q14457 450 aa21.7■■□□□ 1.06
SBSPON-201ENST00000297354 TRIM44Q96DX7 344 aaPredicted RBP21.7■■□□□ 1.06
SBSPON-201ENST00000297354 WDR43Q15061 677 aaKnown RBP eCLIP21.69■■□□□ 1.06
SBSPON-201ENST00000297354 FHAD1B1AJZ9 1412 aa21.69■■□□□ 1.06
SBSPON-201ENST00000297354 FMN1Q68DA7 1419 aa21.67■■□□□ 1.06
SBSPON-201ENST00000297354 ZBTB7CA1YPR0 619 aa21.67■■□□□ 1.06
SBSPON-201ENST00000297354 MS4A1P11836 297 aa21.67■■□□□ 1.06
SBSPON-201ENST00000297354 NEUROD2Q15784 382 aa21.66■■□□□ 1.06
SBSPON-201ENST00000297354 SMG6Q86US8 1419 aaKnown RBP21.66■■□□□ 1.06
SBSPON-201ENST00000297354 PNISRQ8TF01 805 aaKnown RBP21.66■■□□□ 1.06
SBSPON-201ENST00000297354 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.65■■□□□ 1.06
SBSPON-201ENST00000297354 C20orf194Q5TEA3 1177 aa21.64■■□□□ 1.05
SBSPON-201ENST00000297354 FAM161AQ3B820 660 aa21.63■■□□□ 1.05
SBSPON-201ENST00000297354 ST20-MTHFSA0A0A6YYL1 179 aa21.63■■□□□ 1.05
SBSPON-201ENST00000297354 DCAF11Q8TEB1 546 aa21.63■■□□□ 1.05
SBSPON-201ENST00000297354 UACAQ9BZF9 1416 aa21.62■■□□□ 1.05
SBSPON-201ENST00000297354 PRXQ9BXM0 1461 aa21.61■■□□□ 1.05
SBSPON-201ENST00000297354 ZMYND15Q9H091 742 aa21.61■■□□□ 1.05
SBSPON-201ENST00000297354 L1TD1Q5T7N2 865 aaKnown RBP21.6■■□□□ 1.05
SBSPON-201ENST00000297354 FAM43AQ8N2R8 423 aa21.6■■□□□ 1.05
SBSPON-201ENST00000297354 WASHC2CQ9Y4E1 1318 aa21.59■■□□□ 1.05
SBSPON-201ENST00000297354 GOLGA6L3A6NEY3 463 aa21.59■■□□□ 1.05
SBSPON-201ENST00000297354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.57■■□□□ 1.04
SBSPON-201ENST00000297354 PKD2Q13563 968 aa21.55■■□□□ 1.04
SBSPON-201ENST00000297354 CCDC146Q8IYE0 955 aa21.55■■□□□ 1.04
SBSPON-201ENST00000297354 FGD6Q6ZV73 1430 aa21.54■■□□□ 1.04
SBSPON-201ENST00000297354 USP47Q96K76 1375 aa21.53■■□□□ 1.04
SBSPON-201ENST00000297354 A0A0U1RQG5 324 aaPredicted RBP21.52■■□□□ 1.04
SBSPON-201ENST00000297354 NLRP13Q86W25 1043 aa21.5■■□□□ 1.03
SBSPON-201ENST00000297354 AQRO60306 1485 aaKnown RBP eCLIP21.5■■□□□ 1.03
SBSPON-201ENST00000297354 MYBBP1AQ9BQG0 1328 aaKnown RBP21.5■■□□□ 1.03
SBSPON-201ENST00000297354 NCLP19338 710 aaKnown RBP21.5■■□□□ 1.03
SBSPON-201ENST00000297354 ANP32BQ92688 251 aaKnown RBP21.5■■□□□ 1.03
SBSPON-201ENST00000297354 FOXD4L1Q9NU39 408 aa21.5■■□□□ 1.03
SBSPON-201ENST00000297354 IGF1RP08069 1367 aa21.5■■□□□ 1.03
SBSPON-201ENST00000297354 RRAGDQ9NQL2 400 aaPredicted RBP21.49■■□□□ 1.03
SBSPON-201ENST00000297354 CENPQQ7L2Z9 268 aaPredicted RBP21.48■■□□□ 1.03
SBSPON-201ENST00000297354 TIAM1Q13009 1591 aa21.47■■□□□ 1.03
SBSPON-201ENST00000297354 CLUAP1Q96AJ1 413 aa21.47■■□□□ 1.03
SBSPON-201ENST00000297354 MYH16Q9H6N6 1097 aa21.47■■□□□ 1.03
SBSPON-201ENST00000297354 RALBP1Q15311 655 aa21.46■■□□□ 1.03
SBSPON-201ENST00000297354 PANK2Q9BZ23 570 aa21.45■■□□□ 1.02
SBSPON-201ENST00000297354 TNNT2P45379 298 aaPredicted RBP21.44■■□□□ 1.02
SBSPON-201ENST00000297354 KTN1Q86UP2 1357 aaKnown RBP21.44■■□□□ 1.02
SBSPON-201ENST00000297354 TPRNQ4KMQ1 711 aa21.44■■□□□ 1.02
SBSPON-201ENST00000297354 ZNF644Q9H582 1327 aaPredicted RBP21.43■■□□□ 1.02
SBSPON-201ENST00000297354 PTPRKQ15262 1439 aa21.43■■□□□ 1.02
SBSPON-201ENST00000297354 MFAP1P55081 439 aaKnown RBP21.43■■□□□ 1.02
SBSPON-201ENST00000297354 BCL2L13Q9BXK5 485 aa21.43■■□□□ 1.02
SBSPON-201ENST00000297354 COG6Q9Y2V7 657 aa21.42■■□□□ 1.02
SBSPON-201ENST00000297354 PDE3BQ13370 1112 aa21.41■■□□□ 1.02
SBSPON-201ENST00000297354 NAIPQ13075 1403 aa21.41■■□□□ 1.02
SBSPON-201ENST00000297354 KIF15Q9NS87 1388 aa21.4■■□□□ 1.02
SBSPON-201ENST00000297354 ERICH3Q5RHP9 1530 aa21.4■■□□□ 1.02
SBSPON-201ENST00000297354 AMER1Q5JTC6 1135 aaPredicted RBP21.39■■□□□ 1.01
SBSPON-201ENST00000297354 NCOA1Q15788 1441 aa21.39■■□□□ 1.01
SBSPON-201ENST00000297354 RBM10P98175 930 aaKnown RBP21.39■■□□□ 1.01
SBSPON-201ENST00000297354 KNSTRNQ9Y448 316 aa21.39■■□□□ 1.01
SBSPON-201ENST00000297354 HFM1A2PYH4 1435 aa21.36■■□□□ 1.01
SBSPON-201ENST00000297354 PEG3Q9GZU2 1588 aa21.36■■□□□ 1.01
SBSPON-201ENST00000297354 PANK3Q9H999 370 aa21.36■■□□□ 1.01
SBSPON-201ENST00000297354 GOLGA2Q08379 1002 aa21.36■■□□□ 1.01
SBSPON-201ENST00000297354 CFDP1Q9UEE9 299 aaPredicted RBP21.36■■□□□ 1.01
SBSPON-201ENST00000297354 ADAMTS8Q9UP79 889 aa21.36■■□□□ 1.01
SBSPON-201ENST00000297354 FAM13BQ9NYF5 915 aa21.35■■□□□ 1.01
SBSPON-201ENST00000297354 SENP3Q9H4L4 574 aaPredicted RBP21.34■■□□□ 1.01
SBSPON-201ENST00000297354 PODXL2Q9NZ53 605 aa21.34■■□□□ 1.01
SBSPON-201ENST00000297354 BCAR3O75815 825 aa21.34■■□□□ 1.01
SBSPON-201ENST00000297354 FBLN2P98095 1184 aa21.34■■□□□ 1.01
SBSPON-201ENST00000297354 PANK1Q8TE04 598 aa21.33■■□□□ 1
SBSPON-201ENST00000297354 CFTRP13569 1480 aa21.31■■□□□ 1
SBSPON-201ENST00000297354 TOP2BQ02880 1626 aa21.31■■□□□ 1
SBSPON-201ENST00000297354 ROCK2O75116 1388 aaKnown RBP21.3■■□□□ 1
SBSPON-201ENST00000297354 HSP90AB1P08238 724 aaKnown RBP21.3■■□□□ 1
SBSPON-201ENST00000297354 RRP7AQ9Y3A4 280 aaKnown RBP21.29■■□□□ 1
SBSPON-201ENST00000297354 RNF123Q5XPI4 1314 aa21.29■■□□□ 1
SBSPON-201ENST00000297354 C8orf34Q49A92 452 aa21.29■■□□□ 1
SBSPON-201ENST00000297354 APAF1O14727 1248 aa21.28■■□□□ 1
SBSPON-201ENST00000297354 SEC24BO95487 1268 aa21.28■■□□□ 1
SBSPON-201ENST00000297354 CUX1P39880 1505 aa21.28■■□□□ 1
SBSPON-201ENST00000297354 MSNP26038 577 aaKnown RBP21.28■■□□□ 1
SBSPON-201ENST00000297354 HSCBQ8IWL3 235 aa21.28■■□□□ 1
SBSPON-201ENST00000297354 TRAK2O60296 914 aa21.28■■□□□ 1
SBSPON-201ENST00000297354 XRCC6P12956 609 aaKnown RBP eCLIP21.28■■□□□ 1
SBSPON-201ENST00000297354 DNTTIP2Q5QJE6 756 aaKnown RBP21.26■□□□□ 0.99
SBSPON-201ENST00000297354 MYOM3Q5VTT5 1437 aa21.25■□□□□ 0.99
SBSPON-201ENST00000297354 NCOA2Q15596 1464 aa21.24■□□□□ 0.99
SBSPON-201ENST00000297354 TSPY4P0CV99 314 aa21.24■□□□□ 0.99
SBSPON-201ENST00000297354 TSPY10P0CW01 314 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms