RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 CCER2I3L3R5 266 aa18.39■□□□□ 0.54
KCNIP3-201ENST00000295225 HOMEZQ8IX15 550 aa18.38■□□□□ 0.53
KCNIP3-201ENST00000295225 NBPF8Q3BBV2 869 aa18.37■□□□□ 0.53
KCNIP3-201ENST00000295225 ZNF608Q9ULD9 1512 aaPredicted RBP18.36■□□□□ 0.53
KCNIP3-201ENST00000295225 GRIN2BQ13224 1484 aa18.36■□□□□ 0.53
KCNIP3-201ENST00000295225 DENND4BO75064 1496 aaPredicted RBP18.35■□□□□ 0.53
KCNIP3-201ENST00000295225 TARBP1Q13395 1621 aaKnown RBP18.35■□□□□ 0.53
KCNIP3-201ENST00000295225 TULP1O00294 542 aaPredicted RBP18.35■□□□□ 0.53
KCNIP3-201ENST00000295225 EIF4G2P78344 907 aaKnown RBP eCLIP18.34■□□□□ 0.53
KCNIP3-201ENST00000295225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.31■□□□□ 0.52
KCNIP3-201ENST00000295225 SAMD9Q5K651 1589 aa18.31■□□□□ 0.52
KCNIP3-201ENST00000295225 KDM5BQ9UGL1 1544 aa18.31■□□□□ 0.52
KCNIP3-201ENST00000295225 SLC4A1APQ9BWU0 796 aaKnown RBP18.31■□□□□ 0.52
KCNIP3-201ENST00000295225 PDE4CQ08493 712 aa18.31■□□□□ 0.52
KCNIP3-201ENST00000295225 MRS2Q9HD23 443 aa18.29■□□□□ 0.52
KCNIP3-201ENST00000295225 SUPT6HQ7KZ85 1726 aaKnown RBP18.28■□□□□ 0.52
KCNIP3-201ENST00000295225 MRC2Q9UBG0 1479 aa18.27■□□□□ 0.51
KCNIP3-201ENST00000295225 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
KCNIP3-201ENST00000295225 THOC2Q8NI27 1593 aaKnown RBP18.26■□□□□ 0.51
KCNIP3-201ENST00000295225 PBRM1Q86U86 1689 aa18.26■□□□□ 0.51
KCNIP3-201ENST00000295225 UGGT2Q9NYU1 1516 aa18.25■□□□□ 0.51
KCNIP3-201ENST00000295225 EPRSP07814 1512 aaKnown RBP18.24■□□□□ 0.51
KCNIP3-201ENST00000295225 MSH5O43196 834 aa18.24■□□□□ 0.51
KCNIP3-201ENST00000295225 IQGAP2Q13576 1575 aa18.24■□□□□ 0.51
KCNIP3-201ENST00000295225 CHMP7Q8WUX9 453 aaPredicted RBP18.22■□□□□ 0.51
KCNIP3-201ENST00000295225 EHBP1L1Q8N3D4 1523 aa18.22■□□□□ 0.51
KCNIP3-201ENST00000295225 PRKRIP1Q9H875 184 aaPredicted RBP18.22■□□□□ 0.51
KCNIP3-201ENST00000295225 ERCC6Q03468 1493 aa18.21■□□□□ 0.51
KCNIP3-201ENST00000295225 KDM2AQ9Y2K7 1162 aa18.2■□□□□ 0.5
KCNIP3-201ENST00000295225 KIF7Q2M1P5 1343 aa18.19■□□□□ 0.5
KCNIP3-201ENST00000295225 ADAMTS12P58397 1594 aa18.19■□□□□ 0.5
KCNIP3-201ENST00000295225 SALL2Q9Y467 1007 aaPredicted RBP18.18■□□□□ 0.5
KCNIP3-201ENST00000295225 AMER1Q5JTC6 1135 aaPredicted RBP18.17■□□□□ 0.5
KCNIP3-201ENST00000295225 AEBP2Q6ZN18 517 aaPredicted RBP18.17■□□□□ 0.5
KCNIP3-201ENST00000295225 CCDC7Q96M83 1385 aa18.16■□□□□ 0.5
KCNIP3-201ENST00000295225 PRG4Q92954 1404 aaPredicted RBP18.16■□□□□ 0.5
KCNIP3-201ENST00000295225 CFDP1Q9UEE9 299 aaPredicted RBP18.16■□□□□ 0.5
KCNIP3-201ENST00000295225 HECW1Q76N89 1606 aa18.13■□□□□ 0.49
KCNIP3-201ENST00000295225 PKD2Q13563 968 aa18.12■□□□□ 0.49
KCNIP3-201ENST00000295225 ABCC5O15440 1437 aa18.12■□□□□ 0.49
KCNIP3-201ENST00000295225 CNTLNQ9NXG0 1405 aa18.12■□□□□ 0.49
KCNIP3-201ENST00000295225 ARHGEF11O15085 1522 aa18.12■□□□□ 0.49
KCNIP3-201ENST00000295225 ANKRD30BQ9BXX2 1392 aa18.12■□□□□ 0.49
KCNIP3-201ENST00000295225 IFT140Q96RY7 1462 aa18.11■□□□□ 0.49
KCNIP3-201ENST00000295225 DAPK1P53355 1430 aa18.11■□□□□ 0.49
KCNIP3-201ENST00000295225 CDK11AQ9UQ88 783 aaPredicted RBP18.11■□□□□ 0.49
KCNIP3-201ENST00000295225 WDR62O43379 1518 aa18.08■□□□□ 0.49
KCNIP3-201ENST00000295225 ERICH6BQ5W0A0 696 aa18.08■□□□□ 0.48
KCNIP3-201ENST00000295225 DISP1Q96F81 1524 aa18.08■□□□□ 0.48
KCNIP3-201ENST00000295225 TCOF1Q13428 1488 aaKnown RBP18.07■□□□□ 0.48
KCNIP3-201ENST00000295225 PLB1Q6P1J6 1458 aa18.07■□□□□ 0.48
KCNIP3-201ENST00000295225 GRIN2AQ12879 1464 aa18.06■□□□□ 0.48
KCNIP3-201ENST00000295225 NCOA1Q15788 1441 aa18.06■□□□□ 0.48
KCNIP3-201ENST00000295225 KIAA0586Q9BVV6 1533 aa18.05■□□□□ 0.48
KCNIP3-201ENST00000295225 AKNAQ7Z591 1439 aa18.05■□□□□ 0.48
KCNIP3-201ENST00000295225 EIF4G3O43432 1585 aaKnown RBP18.05■□□□□ 0.48
KCNIP3-201ENST00000295225 NUP153P49790 1475 aaKnown RBP18.05■□□□□ 0.48
KCNIP3-201ENST00000295225 JPH4Q96JJ6 628 aa18.05■□□□□ 0.48
KCNIP3-201ENST00000295225 RGL3Q3MIN7 710 aa18.03■□□□□ 0.48
KCNIP3-201ENST00000295225 GCC2Q8IWJ2 1684 aa18.03■□□□□ 0.48
KCNIP3-201ENST00000295225 HNRNPMP52272 730 aaKnown RBP eCLIP18.02■□□□□ 0.48
KCNIP3-201ENST00000295225 KIAA0556O60303 1618 aa18.02■□□□□ 0.47
KCNIP3-201ENST00000295225 RPRD2Q5VT52 1461 aaKnown RBP18.01■□□□□ 0.47
KCNIP3-201ENST00000295225 MIA2Q96PC5 1412 aa18.01■□□□□ 0.47
KCNIP3-201ENST00000295225 CCDC136Q96JN2 1154 aa18.01■□□□□ 0.47
KCNIP3-201ENST00000295225 TEX14Q8IWB6 1497 aa18■□□□□ 0.47
KCNIP3-201ENST00000295225 PPP4R2Q9NY27 417 aa18■□□□□ 0.47
KCNIP3-201ENST00000295225 FGD1P98174 961 aa17.99■□□□□ 0.47
KCNIP3-201ENST00000295225 DCAF11Q8TEB1 546 aa17.99■□□□□ 0.47
KCNIP3-201ENST00000295225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.47
KCNIP3-201ENST00000295225 USP47Q96K76 1375 aa17.99■□□□□ 0.47
KCNIP3-201ENST00000295225 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
KCNIP3-201ENST00000295225 TAF7LQ5H9L4 462 aa17.98■□□□□ 0.47
KCNIP3-201ENST00000295225 ST20-MTHFSA0A0A6YYL1 179 aa17.98■□□□□ 0.47
KCNIP3-201ENST00000295225 NPM2Q86SE8 214 aaKnown RBP17.96■□□□□ 0.47
KCNIP3-201ENST00000295225 NUP155O75694 1391 aa17.96■□□□□ 0.47
KCNIP3-201ENST00000295225 ZBED9Q6R2W3 1325 aa17.96■□□□□ 0.47
KCNIP3-201ENST00000295225 PZPP20742 1482 aa17.95■□□□□ 0.46
KCNIP3-201ENST00000295225 SPATA31E1Q6ZUB1 1445 aa17.95■□□□□ 0.46
KCNIP3-201ENST00000295225 RAPGEF6Q8TEU7 1601 aa17.95■□□□□ 0.46
KCNIP3-201ENST00000295225 CEP170Q5SW79 1584 aa17.95■□□□□ 0.46
KCNIP3-201ENST00000295225 TMC1Q8TDI8 760 aa17.95■□□□□ 0.46
KCNIP3-201ENST00000295225 BCL11BQ9C0K0 894 aaPredicted RBP17.95■□□□□ 0.46
KCNIP3-201ENST00000295225 CAMSAP2Q08AD1 1489 aa17.94■□□□□ 0.46
KCNIP3-201ENST00000295225 KIF14Q15058 1648 aa17.94■□□□□ 0.46
KCNIP3-201ENST00000295225 PLEKHD1A6NEE1 506 aa17.92■□□□□ 0.46
KCNIP3-201ENST00000295225 DHX29Q7Z478 1369 aaKnown RBP17.91■□□□□ 0.46
KCNIP3-201ENST00000295225 BCORL1Q5H9F3 1711 aa17.9■□□□□ 0.46
KCNIP3-201ENST00000295225 NBR1Q14596 966 aa17.9■□□□□ 0.46
KCNIP3-201ENST00000295225 SYNJ2O15056 1496 aa17.9■□□□□ 0.46
KCNIP3-201ENST00000295225 GPATCH8Q9UKJ3 1502 aaKnown RBP17.9■□□□□ 0.46
KCNIP3-201ENST00000295225 DNMT1P26358 1616 aaKnown RBP17.9■□□□□ 0.46
KCNIP3-201ENST00000295225 ROCK1Q13464 1354 aa17.89■□□□□ 0.46
KCNIP3-201ENST00000295225 TROQ12816 1431 aaPredicted RBP17.89■□□□□ 0.45
KCNIP3-201ENST00000295225 NBPF1Q3BBV0 1214 aa17.88■□□□□ 0.45
KCNIP3-201ENST00000295225 SKAP1Q86WV1 359 aa17.88■□□□□ 0.45
KCNIP3-201ENST00000295225 CARMIL2Q6F5E8 1435 aa17.87■□□□□ 0.45
KCNIP3-201ENST00000295225 MAGI1Q96QZ7 1491 aaPredicted RBP17.87■□□□□ 0.45
KCNIP3-201ENST00000295225 PAK3O75914 559 aaPredicted RBP17.87■□□□□ 0.45
KCNIP3-201ENST00000295225 ANKRD50Q9ULJ7 1429 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms