RNA–Protein interactions for RNA: ENST00000294256.12

SYVN1-201, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYVN1, Length 3,048 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-201ENST00000294256 JPH4Q96JJ6 628 aa24.59■■□□□ 1.53
SYVN1-201ENST00000294256 TCOF1Q13428 1488 aaKnown RBP24.59■■□□□ 1.53
SYVN1-201ENST00000294256 EIF4G3O43432 1585 aaKnown RBP24.58■■□□□ 1.53
SYVN1-201ENST00000294256 DENND4BO75064 1496 aaPredicted RBP24.58■■□□□ 1.53
SYVN1-201ENST00000294256 EIF4G2P78344 907 aaKnown RBP eCLIP24.57■■□□□ 1.52
SYVN1-201ENST00000294256 KIAA0556O60303 1618 aa24.57■■□□□ 1.52
SYVN1-201ENST00000294256 MIA2Q96PC5 1412 aa24.57■■□□□ 1.52
SYVN1-201ENST00000294256 DAPK1P53355 1430 aa24.56■■□□□ 1.52
SYVN1-201ENST00000294256 WASHC2AQ641Q2 1341 aa24.55■■□□□ 1.52
SYVN1-201ENST00000294256 ABCC5O15440 1437 aa24.54■■□□□ 1.52
SYVN1-201ENST00000294256 NBPF8Q3BBV2 869 aa24.52■■□□□ 1.52
SYVN1-201ENST00000294256 CCER2I3L3R5 266 aa24.51■■□□□ 1.51
SYVN1-201ENST00000294256 HNRNPUQ00839 825 aaKnown RBP eCLIP24.51■■□□□ 1.51
SYVN1-201ENST00000294256 C11orf95C9JLR9 678 aaPredicted RBP24.51■■□□□ 1.51
SYVN1-201ENST00000294256 RAPGEF6Q8TEU7 1601 aa24.49■■□□□ 1.51
SYVN1-201ENST00000294256 KDM5BQ9UGL1 1544 aa24.48■■□□□ 1.51
SYVN1-201ENST00000294256 NEFLP07196 543 aa24.47■■□□□ 1.51
SYVN1-201ENST00000294256 GCC2Q8IWJ2 1684 aa24.46■■□□□ 1.51
SYVN1-201ENST00000294256 PLEKHD1A6NEE1 506 aa24.46■■□□□ 1.51
SYVN1-201ENST00000294256 IRX6P78412 446 aaPredicted RBP24.44■■□□□ 1.5
SYVN1-201ENST00000294256 CCDC184Q52MB2 194 aa24.44■■□□□ 1.5
SYVN1-201ENST00000294256 CEP170Q5SW79 1584 aa24.44■■□□□ 1.5
SYVN1-201ENST00000294256 TROQ12816 1431 aaPredicted RBP24.42■■□□□ 1.5
SYVN1-201ENST00000294256 PKD2Q13563 968 aa24.42■■□□□ 1.5
SYVN1-201ENST00000294256 FAM9BQ8IZU0 186 aa24.42■■□□□ 1.5
SYVN1-201ENST00000294256 SENP3-EIF4A1A0A087X0R7 540 aa24.4■■□□□ 1.5
SYVN1-201ENST00000294256 ANKRD30BQ9BXX2 1392 aa24.4■■□□□ 1.5
SYVN1-201ENST00000294256 CARMIL2Q6F5E8 1435 aa24.4■■□□□ 1.5
SYVN1-201ENST00000294256 SYNJ2O15056 1496 aa24.4■■□□□ 1.5
SYVN1-201ENST00000294256 CAMSAP2Q08AD1 1489 aa24.39■■□□□ 1.49
SYVN1-201ENST00000294256 HNRNPMP52272 730 aaKnown RBP eCLIP24.39■■□□□ 1.49
SYVN1-201ENST00000294256 AKNAQ7Z591 1439 aa24.38■■□□□ 1.49
SYVN1-201ENST00000294256 KIF14Q15058 1648 aa24.38■■□□□ 1.49
SYVN1-201ENST00000294256 KDM2AQ9Y2K7 1162 aa24.37■■□□□ 1.49
SYVN1-201ENST00000294256 MAGI1Q96QZ7 1491 aaPredicted RBP24.37■■□□□ 1.49
SYVN1-201ENST00000294256 GPATCH8Q9UKJ3 1502 aaKnown RBP24.35■■□□□ 1.49
SYVN1-201ENST00000294256 ROCK1Q13464 1354 aa24.35■■□□□ 1.49
SYVN1-201ENST00000294256 DNMT1P26358 1616 aaKnown RBP24.34■■□□□ 1.49
SYVN1-201ENST00000294256 TSHZ2Q9NRE2 1034 aa24.34■■□□□ 1.49
SYVN1-201ENST00000294256 TSPY4P0CV99 314 aa24.31■■□□□ 1.48
SYVN1-201ENST00000294256 TSPY10P0CW01 314 aa24.31■■□□□ 1.48
SYVN1-201ENST00000294256 NCOA1Q15788 1441 aa24.31■■□□□ 1.48
SYVN1-201ENST00000294256 MRS2Q9HD23 443 aa24.3■■□□□ 1.48
SYVN1-201ENST00000294256 RPRD2Q5VT52 1461 aaKnown RBP24.29■■□□□ 1.48
SYVN1-201ENST00000294256 CCDC7Q96M83 1385 aa24.28■■□□□ 1.48
SYVN1-201ENST00000294256 NUP155O75694 1391 aa24.28■■□□□ 1.48
SYVN1-201ENST00000294256 ANKRD30AQ9BXX3 1397 aa24.27■■□□□ 1.48
SYVN1-201ENST00000294256 KIF7Q2M1P5 1343 aa24.27■■□□□ 1.48
SYVN1-201ENST00000294256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.25■■□□□ 1.476e-6■□□□□ 11.2
SYVN1-201ENST00000294256 PRKRIP1Q9H875 184 aaPredicted RBP24.24■■□□□ 1.47
SYVN1-201ENST00000294256 PZPP20742 1482 aa24.24■■□□□ 1.47
SYVN1-201ENST00000294256 CNTLNQ9NXG0 1405 aa24.23■■□□□ 1.47
SYVN1-201ENST00000294256 ANKRD50Q9ULJ7 1429 aa24.23■■□□□ 1.47
SYVN1-201ENST00000294256 ATP10BO94823 1461 aa24.23■■□□□ 1.47
SYVN1-201ENST00000294256 NUP160Q12769 1436 aa24.21■■□□□ 1.47
SYVN1-201ENST00000294256 TEX14Q8IWB6 1497 aa24.21■■□□□ 1.47
SYVN1-201ENST00000294256 PTPRGP23470 1445 aa24.2■■□□□ 1.46
SYVN1-201ENST00000294256 RGL3Q3MIN7 710 aa24.19■■□□□ 1.46
SYVN1-201ENST00000294256 DCAF11Q8TEB1 546 aa24.17■■□□□ 1.46
SYVN1-201ENST00000294256 KIAA1107Q9UPP5 1409 aa24.16■■□□□ 1.46
SYVN1-201ENST00000294256 C9orf84Q5VXU9 1444 aa24.16■■□□□ 1.46
SYVN1-201ENST00000294256 CARD11Q9BXL7 1154 aa24.15■■□□□ 1.46
SYVN1-201ENST00000294256 ITSN2Q9NZM3 1697 aa24.14■■□□□ 1.45
SYVN1-201ENST00000294256 USP47Q96K76 1375 aa24.13■■□□□ 1.45
SYVN1-201ENST00000294256 KIF15Q9NS87 1388 aa24.12■■□□□ 1.45
SYVN1-201ENST00000294256 CDC42BPAQ5VT25 1732 aa24.06■■□□□ 1.44
SYVN1-201ENST00000294256 ST20-MTHFSA0A0A6YYL1 179 aa24.06■■□□□ 1.44
SYVN1-201ENST00000294256 ABCA8O94911 1581 aa24.06■■□□□ 1.44
SYVN1-201ENST00000294256 SPATA31E1Q6ZUB1 1445 aa24.06■■□□□ 1.44
SYVN1-201ENST00000294256 ABCC10Q5T3U5 1492 aa24.05■■□□□ 1.44
SYVN1-201ENST00000294256 ADGBQ8N7X0 1667 aa24.04■■□□□ 1.44
SYVN1-201ENST00000294256 ADGRL2O95490 1459 aa24.02■■□□□ 1.44
SYVN1-201ENST00000294256 ADCY10Q96PN6 1610 aa24■■□□□ 1.43
SYVN1-201ENST00000294256 CROCC2H7BZ55 1655 aa23.98■■□□□ 1.43
SYVN1-201ENST00000294256 SALL2Q9Y467 1007 aaPredicted RBP23.97■■□□□ 1.43
SYVN1-201ENST00000294256 RBM19Q9Y4C8 960 aaKnown RBP23.94■■□□□ 1.42
SYVN1-201ENST00000294256 NBPF1Q3BBV0 1214 aa23.94■■□□□ 1.42
SYVN1-201ENST00000294256 TMC1Q8TDI8 760 aa23.94■■□□□ 1.42
SYVN1-201ENST00000294256 MYT1LQ9UL68 1186 aa23.93■■□□□ 1.42
SYVN1-201ENST00000294256 ARHGAP5Q13017 1502 aa23.93■■□□□ 1.42
SYVN1-201ENST00000294256 ROCK2O75116 1388 aaKnown RBP23.93■■□□□ 1.42
SYVN1-201ENST00000294256 BCORL1Q5H9F3 1711 aa23.93■■□□□ 1.42
SYVN1-201ENST00000294256 B4GALNT3Q6L9W6 998 aa23.92■■□□□ 1.42
SYVN1-201ENST00000294256 ERCC6L2Q5T890 1561 aa23.92■■□□□ 1.42
SYVN1-201ENST00000294256 MBD5Q9P267 1494 aa23.92■■□□□ 1.42
SYVN1-201ENST00000294256 CCDC141Q6ZP82 1450 aa23.89■■□□□ 1.42
SYVN1-201ENST00000294256 DHX29Q7Z478 1369 aaKnown RBP23.89■■□□□ 1.42
SYVN1-201ENST00000294256 SYCP2Q9BX26 1530 aa23.89■■□□□ 1.41
SYVN1-201ENST00000294256 SAMD9LQ8IVG5 1584 aa23.88■■□□□ 1.41
SYVN1-201ENST00000294256 ZBED9Q6R2W3 1325 aa23.88■■□□□ 1.41
SYVN1-201ENST00000294256 CHD1O14646 1710 aa23.88■■□□□ 1.41
SYVN1-201ENST00000294256 CCDC144AA2RUR9 1427 aa23.86■■□□□ 1.41
SYVN1-201ENST00000294256 SHANK2Q9UPX8 1470 aa23.85■■□□□ 1.41
SYVN1-201ENST00000294256 CDC42BPBQ9Y5S2 1711 aa23.84■■□□□ 1.41
SYVN1-201ENST00000294256 TTC37Q6PGP7 1564 aa23.82■■□□□ 1.4
SYVN1-201ENST00000294256 PLEKHH2Q8IVE3 1493 aa23.82■■□□□ 1.4
SYVN1-201ENST00000294256 FAM135AQ9P2D6 1515 aa23.82■■□□□ 1.4
SYVN1-201ENST00000294256 KDM5CP41229 1560 aa23.81■■□□□ 1.4
SYVN1-201ENST00000294256 RSPH4AQ5TD94 716 aa23.81■■□□□ 1.4
SYVN1-201ENST00000294256 AFAP1Q8N556 730 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms