RNA–Protein interactions for RNA: ENST00000265616.9

UBXN8-201, Transcript of UBX domain protein 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN8, Length 1,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-201ENST00000265616 RIMBP3CA6NJZ7 1639 aa11.7□□□□□ -0.54
UBXN8-201ENST00000265616 RIMBP3BA6NNM3 1639 aa11.7□□□□□ -0.54
UBXN8-201ENST00000265616 RIMBP3Q9UFD9 1639 aa11.7□□□□□ -0.54
UBXN8-201ENST00000265616 TSPYL2Q9H2G4 693 aaPredicted RBP11.7□□□□□ -0.54
UBXN8-201ENST00000265616 DCAF8Q5TAQ9 597 aa11.69□□□□□ -0.54
UBXN8-201ENST00000265616 SPNS2Q8IVW8 549 aa11.68□□□□□ -0.54
UBXN8-201ENST00000265616 CIZ1Q9ULV3 898 aaPredicted RBP11.67□□□□□ -0.54
UBXN8-201ENST00000265616 FAM212AQ96EL1 285 aa11.66□□□□□ -0.54
UBXN8-201ENST00000265616 MS4A3Q96HJ5 214 aa11.65□□□□□ -0.54
UBXN8-201ENST00000265616 ARAP1Q96P48 1450 aa11.64□□□□□ -0.55
UBXN8-201ENST00000265616 URB2Q14146 1524 aaKnown RBP11.63□□□□□ -0.55
UBXN8-201ENST00000265616 GSE1Q14687 1217 aa11.63□□□□□ -0.55
UBXN8-201ENST00000265616 RTN4Q9NQC3 1192 aaKnown RBP11.62□□□□□ -0.55
UBXN8-201ENST00000265616 ARHGEF11O15085 1522 aa11.61□□□□□ -0.55
UBXN8-201ENST00000265616 RRBP1Q9P2E9 1410 aaKnown RBP11.61□□□□□ -0.55
UBXN8-201ENST00000265616 PKD2Q13563 968 aa11.6□□□□□ -0.55
UBXN8-201ENST00000265616 AMER1Q5JTC6 1135 aaPredicted RBP11.59□□□□□ -0.55
UBXN8-201ENST00000265616 CCDC61Q9Y6R9 512 aa11.59□□□□□ -0.55
UBXN8-201ENST00000265616 POTEFA5A3E0 1075 aa11.57□□□□□ -0.56
UBXN8-201ENST00000265616 ATN1P54259 1190 aaPredicted RBP11.57□□□□□ -0.56
UBXN8-201ENST00000265616 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
UBXN8-201ENST00000265616 DIEXFQ68CQ4 756 aaKnown RBP11.56□□□□□ -0.56
UBXN8-201ENST00000265616 CENPBP07199 599 aaPredicted RBP11.55□□□□□ -0.56
UBXN8-201ENST00000265616 IFT140Q96RY7 1462 aa11.54□□□□□ -0.56
UBXN8-201ENST00000265616 ARHGAP35Q9NRY4 1499 aa11.54□□□□□ -0.56
UBXN8-201ENST00000265616 ST18O60284 1047 aa11.54□□□□□ -0.56
UBXN8-201ENST00000265616 PYGBP11216 843 aa11.54□□□□□ -0.56
UBXN8-201ENST00000265616 CYB5RLQ6IPT4 315 aa11.54□□□□□ -0.56
UBXN8-201ENST00000265616 DNMBPQ6XZF7 1577 aa11.54□□□□□ -0.56
UBXN8-201ENST00000265616 ZNF608Q9ULD9 1512 aaPredicted RBP11.53□□□□□ -0.56
UBXN8-201ENST00000265616 CUL7Q14999 1698 aa11.53□□□□□ -0.56
UBXN8-201ENST00000265616 EFCAB5A4FU69 1503 aa11.53□□□□□ -0.56
UBXN8-201ENST00000265616 IGF1RP08069 1367 aa11.52□□□□□ -0.57
UBXN8-201ENST00000265616 FHAD1B1AJZ9 1412 aa11.52□□□□□ -0.57
UBXN8-201ENST00000265616 AQRO60306 1485 aaKnown RBP eCLIP11.51□□□□□ -0.572e-6■■■■■ 26.9
UBXN8-201ENST00000265616 ABCA10Q8WWZ4 1543 aa11.51□□□□□ -0.57
UBXN8-201ENST00000265616 ECM2O94769 699 aaPredicted RBP11.51□□□□□ -0.57
UBXN8-201ENST00000265616 FGD5Q6ZNL6 1462 aa11.5□□□□□ -0.57
UBXN8-201ENST00000265616 TIAM1Q13009 1591 aa11.5□□□□□ -0.57
UBXN8-201ENST00000265616 ACIN1Q9UKV3 1341 aaKnown RBP11.5□□□□□ -0.57
UBXN8-201ENST00000265616 CFAP43Q8NDM7 1665 aa11.49□□□□□ -0.57
UBXN8-201ENST00000265616 EIF4G3O43432 1585 aaKnown RBP11.49□□□□□ -0.57
UBXN8-201ENST00000265616 CHRM1P11229 460 aaPredicted RBP11.49□□□□□ -0.57
UBXN8-201ENST00000265616 CHD1O14646 1710 aa11.48□□□□□ -0.57
UBXN8-201ENST00000265616 KIF12Q96FN5 646 aa11.48□□□□□ -0.57
UBXN8-201ENST00000265616 CARMIL1Q5VZK9 1371 aa11.47□□□□□ -0.57
UBXN8-201ENST00000265616 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.47□□□□□ -0.57
UBXN8-201ENST00000265616 MAP3K13O43283 966 aa11.46□□□□□ -0.57
UBXN8-201ENST00000265616 CCNB3Q8WWL7 1395 aa11.46□□□□□ -0.57
UBXN8-201ENST00000265616 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
UBXN8-201ENST00000265616 DHX57Q6P158 1386 aaKnown RBP11.45□□□□□ -0.58
UBXN8-201ENST00000265616 FYCO1Q9BQS8 1478 aa11.44□□□□□ -0.58
UBXN8-201ENST00000265616 TMEM121BQ9BXQ6 578 aaPredicted RBP11.44□□□□□ -0.58
UBXN8-201ENST00000265616 CTTNBP2Q8WZ74 1663 aa11.44□□□□□ -0.58
UBXN8-201ENST00000265616 WDR97A6NE52 1622 aa11.43□□□□□ -0.58
UBXN8-201ENST00000265616 RGL2O15211 777 aa11.42□□□□□ -0.58
UBXN8-201ENST00000265616 PCDHB13Q9Y5F0 798 aa11.42□□□□□ -0.58
UBXN8-201ENST00000265616 LRRC9Q6ZRR7 1453 aa11.42□□□□□ -0.58
UBXN8-201ENST00000265616 RNF25Q96BH1 459 aaPredicted RBP11.41□□□□□ -0.58
UBXN8-201ENST00000265616 BMP2KQ9NSY1 1161 aaPredicted RBP11.4□□□□□ -0.58
UBXN8-201ENST00000265616 PCDHB8Q9UN66 801 aa11.39□□□□□ -0.59
UBXN8-201ENST00000265616 TIMELESSQ9UNS1 1208 aa11.39□□□□□ -0.59
UBXN8-201ENST00000265616 CASKIN1Q8WXD9 1431 aa11.38□□□□□ -0.59
UBXN8-201ENST00000265616 IFNL1Q8IU54 200 aa11.38□□□□□ -0.59
UBXN8-201ENST00000265616 SLAIN1Q8ND83 568 aa11.38□□□□□ -0.59
UBXN8-201ENST00000265616 SGIP1Q9BQI5 828 aa11.38□□□□□ -0.59
UBXN8-201ENST00000265616 POLA1P09884 1462 aaPredicted RBP11.38□□□□□ -0.59
UBXN8-201ENST00000265616 TTBK1Q5TCY1 1321 aaPredicted RBP11.38□□□□□ -0.59
UBXN8-201ENST00000265616 SEC24BO95487 1268 aa11.38□□□□□ -0.59
UBXN8-201ENST00000265616 TARBP1Q13395 1621 aaKnown RBP11.37□□□□□ -0.59
UBXN8-201ENST00000265616 FMN1Q68DA7 1419 aa11.37□□□□□ -0.59
UBXN8-201ENST00000265616 ABCA5Q8WWZ7 1642 aa11.37□□□□□ -0.59
UBXN8-201ENST00000265616 TIE1P35590 1138 aa11.37□□□□□ -0.59
UBXN8-201ENST00000265616 KANK4Q5T7N3 995 aaPredicted RBP11.37□□□□□ -0.59
UBXN8-201ENST00000265616 COLQQ9Y215 455 aaPredicted RBP11.36□□□□□ -0.59
UBXN8-201ENST00000265616 PCF11O94913 1555 aaKnown RBP11.36□□□□□ -0.59
UBXN8-201ENST00000265616 SAMD9Q5K651 1589 aa11.35□□□□□ -0.59
UBXN8-201ENST00000265616 RIOK3O14730 519 aaKnown RBP11.34□□□□□ -0.59
UBXN8-201ENST00000265616 NEUROD1Q13562 356 aa11.34□□□□□ -0.59
UBXN8-201ENST00000265616 ZNF467Q7Z7K2 595 aaPredicted RBP11.34□□□□□ -0.59
UBXN8-201ENST00000265616 SETD5Q9C0A6 1442 aa11.33□□□□□ -0.6
UBXN8-201ENST00000265616 TRPC6Q9Y210 931 aa11.32□□□□□ -0.6
UBXN8-201ENST00000265616 IER5LQ5T953 404 aa11.31□□□□□ -0.6
UBXN8-201ENST00000265616 CLASP1Q7Z460 1538 aa11.3□□□□□ -0.6
UBXN8-201ENST00000265616 SNAPC4Q5SXM2 1469 aa11.29□□□□□ -0.6
UBXN8-201ENST00000265616 MAPKBP1O60336 1514 aa11.29□□□□□ -0.6
UBXN8-201ENST00000265616 RAB3GAP2Q9H2M9 1393 aa11.28□□□□□ -0.6
UBXN8-201ENST00000265616 RAD54L2Q9Y4B4 1467 aa11.28□□□□□ -0.6
UBXN8-201ENST00000265616 CHMP7Q8WUX9 453 aaPredicted RBP11.27□□□□□ -0.6
UBXN8-201ENST00000265616 TDRD9Q8NDG6 1382 aaKnown RBP11.27□□□□□ -0.61
UBXN8-201ENST00000265616 SNPHO15079 494 aa11.26□□□□□ -0.61
UBXN8-201ENST00000265616 VGFO15240 615 aaPredicted RBP11.26□□□□□ -0.61
UBXN8-201ENST00000265616 PSEN1P49768 467 aa11.25□□□□□ -0.61
UBXN8-201ENST00000265616 PHLDB1Q86UU1 1377 aa11.25□□□□□ -0.61
UBXN8-201ENST00000265616 CCDC18Q5T9S5 1454 aa11.25□□□□□ -0.61
UBXN8-201ENST00000265616 EHBP1L1Q8N3D4 1523 aa11.25□□□□□ -0.61
UBXN8-201ENST00000265616 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
UBXN8-201ENST00000265616 GAPVD1Q14C86 1478 aa11.25□□□□□ -0.61
UBXN8-201ENST00000265616 MAGI1Q96QZ7 1491 aaPredicted RBP11.25□□□□□ -0.61
UBXN8-201ENST00000265616 GRIN2BQ13224 1484 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms