RNA–Protein interactions for RNA: ENST00000265616.9

UBXN8-201, Transcript of UBX domain protein 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN8, Length 1,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-201ENST00000265616 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
UBXN8-201ENST00000265616 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.29
UBXN8-201ENST00000265616 SENP3Q9H4L4 574 aaPredicted RBP21.32■■□□□ 1
UBXN8-201ENST00000265616 PHF23Q9BUL5 403 aaPredicted RBP20.81■□□□□ 0.92
UBXN8-201ENST00000265616 POTEDQ86YR6 584 aa20.5■□□□□ 0.87
UBXN8-201ENST00000265616 FOXD1Q16676 465 aa19.92■□□□□ 0.78
UBXN8-201ENST00000265616 MSH5O43196 834 aa19.18■□□□□ 0.66
UBXN8-201ENST00000265616 PIAS4Q8N2W9 510 aaPredicted RBP18.34■□□□□ 0.53
UBXN8-201ENST00000265616 PLPPR3Q6T4P5 718 aa17.92■□□□□ 0.46
UBXN8-201ENST00000265616 PPP6R1Q9UPN7 881 aa17.72■□□□□ 0.43
UBXN8-201ENST00000265616 ADRA2BP18089 450 aa17.59■□□□□ 0.41
UBXN8-201ENST00000265616 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
UBXN8-201ENST00000265616 DMRT2Q9Y5R5 561 aa16.72■□□□□ 0.27
UBXN8-201ENST00000265616 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
UBXN8-201ENST00000265616 NISCHQ9Y2I1 1504 aa16.33■□□□□ 0.21
UBXN8-201ENST00000265616 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.2
UBXN8-201ENST00000265616 RNF39Q9H2S5 420 aa16.21■□□□□ 0.19
UBXN8-201ENST00000265616 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
UBXN8-201ENST00000265616 C1QBPQ07021 282 aaKnown RBP15.97■□□□□ 0.15
UBXN8-201ENST00000265616 POTEHQ6S545 545 aa15.86■□□□□ 0.13
UBXN8-201ENST00000265616 PPP4R3CPQ6ZMV5 832 aa15.82■□□□□ 0.12
UBXN8-201ENST00000265616 HOXD11P31277 338 aaPredicted RBP15.69■□□□□ 0.1
UBXN8-201ENST00000265616 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
UBXN8-201ENST00000265616 KCNA4P22459 653 aa15.47■□□□□ 0.07
UBXN8-201ENST00000265616 NCBP3Q53F19 620 aaKnown RBP15.36■□□□□ 0.05
UBXN8-201ENST00000265616 CNKSR2Q8WXI2 1034 aa15.35■□□□□ 0.05
UBXN8-201ENST00000265616 RNF216Q9NWF9 866 aaPredicted RBP15.27■□□□□ 0.04
UBXN8-201ENST00000265616 NPM3O75607 178 aaKnown RBP15.18■□□□□ 0.02
UBXN8-201ENST00000265616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.89□□□□□ -0.03
UBXN8-201ENST00000265616 DSG3P32926 999 aa14.79□□□□□ -0.04
UBXN8-201ENST00000265616 SLC4A1APQ9BWU0 796 aaKnown RBP14.7□□□□□ -0.06
UBXN8-201ENST00000265616 CAPN15O75808 1086 aa14.57□□□□□ -0.08
UBXN8-201ENST00000265616 SPINK5Q9NQ38 1064 aaPredicted RBP14.51□□□□□ -0.09
UBXN8-201ENST00000265616 U3KPZ7 1027 aaPredicted RBP14.44□□□□□ -0.1
UBXN8-201ENST00000265616 SP7Q8TDD2 431 aaPredicted RBP14.37□□□□□ -0.11
UBXN8-201ENST00000265616 SLC4A2P04920 1241 aa14.36□□□□□ -0.11
UBXN8-201ENST00000265616 EHMT2Q96KQ7 1210 aa14.31□□□□□ -0.12
UBXN8-201ENST00000265616 CHRDL2Q6WN34 429 aa14.27□□□□□ -0.12
UBXN8-201ENST00000265616 ABCC9O60706 1549 aa14.26□□□□□ -0.13
UBXN8-201ENST00000265616 ZBTB22O15209 634 aa14.25□□□□□ -0.13
UBXN8-201ENST00000265616 RBM42Q9BTD8 480 aaKnown RBP14.23□□□□□ -0.13
UBXN8-201ENST00000265616 FOXD4L1Q9NU39 408 aa14.19□□□□□ -0.14
UBXN8-201ENST00000265616 CSRNP3Q8WYN3 585 aa14.16□□□□□ -0.14
UBXN8-201ENST00000265616 CCDC180Q9P1Z9 1646 aa14.14□□□□□ -0.15
UBXN8-201ENST00000265616 ZNF219Q9P2Y4 722 aaPredicted RBP14.1□□□□□ -0.15
UBXN8-201ENST00000265616 APLP2Q06481 763 aa14.08□□□□□ -0.16
UBXN8-201ENST00000265616 ABCB7O75027 752 aa14.07□□□□□ -0.16
UBXN8-201ENST00000265616 TRHP20396 242 aaPredicted RBP14.05□□□□□ -0.16
UBXN8-201ENST00000265616 MYCNP04198 464 aaPredicted RBP13.99□□□□□ -0.17
UBXN8-201ENST00000265616 ZCCHC6Q5VYS8 1495 aaKnown RBP13.85□□□□□ -0.19
UBXN8-201ENST00000265616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.83□□□□□ -0.2
UBXN8-201ENST00000265616 HNRNPUL2Q1KMD3 747 aaKnown RBP13.83□□□□□ -0.2
UBXN8-201ENST00000265616 SAMD1Q6SPF0 538 aaPredicted RBP13.8□□□□□ -0.2
UBXN8-201ENST00000265616 HAX1O00165 279 aa13.72□□□□□ -0.21
UBXN8-201ENST00000265616 ATF5Q9Y2D1 282 aaPredicted RBP13.7□□□□□ -0.22
UBXN8-201ENST00000265616 ATXN8OSP0DMR3 200 aa13.68□□□□□ -0.22
UBXN8-201ENST00000265616 DCAF1Q9Y4B6 1507 aa13.68□□□□□ -0.22
UBXN8-201ENST00000265616 PIP4P2Q8N4L2 257 aa13.67□□□□□ -0.22
UBXN8-201ENST00000265616 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
UBXN8-201ENST00000265616 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
UBXN8-201ENST00000265616 REM2Q8IYK8 340 aaPredicted RBP13.45□□□□□ -0.26
UBXN8-201ENST00000265616 RB1CC1Q8TDY2 1594 aa13.45□□□□□ -0.26
UBXN8-201ENST00000265616 POLA2Q14181 598 aa13.44□□□□□ -0.26
UBXN8-201ENST00000265616 LHX8Q68G74 356 aa13.44□□□□□ -0.26
UBXN8-201ENST00000265616 PLSCR2Q9NRY7 297 aa13.44□□□□□ -0.26
UBXN8-201ENST00000265616 EVX2Q03828 476 aa13.4□□□□□ -0.26
UBXN8-201ENST00000265616 MYO15BQ96JP2 1530 aa13.36□□□□□ -0.27
UBXN8-201ENST00000265616 SHROOM4Q9ULL8 1493 aa13.35□□□□□ -0.27
UBXN8-201ENST00000265616 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
UBXN8-201ENST00000265616 NACADO15069 1562 aa13.25□□□□□ -0.29
UBXN8-201ENST00000265616 ZBTB12Q9Y330 459 aaPredicted RBP13.23□□□□□ -0.29
UBXN8-201ENST00000265616 PABPN1Q86U42 306 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBXN8-201ENST00000265616 SUPT5HO00267 1087 aaKnown RBP13.14□□□□□ -0.31
UBXN8-201ENST00000265616 DCAF8L2P0C7V8 631 aa13.14□□□□□ -0.31
UBXN8-201ENST00000265616 UNC13AQ9UPW8 1703 aa13.14□□□□□ -0.31
UBXN8-201ENST00000265616 GABBR2O75899 941 aa13.11□□□□□ -0.31
UBXN8-201ENST00000265616 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.32
UBXN8-201ENST00000265616 C19orf67A6NJJ6 358 aa13.07□□□□□ -0.32
UBXN8-201ENST00000265616 FBLN2P98095 1184 aa13.04□□□□□ -0.32
UBXN8-201ENST00000265616 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
UBXN8-201ENST00000265616 BICRAQ9NZM4 1560 aa13.02□□□□□ -0.32
UBXN8-201ENST00000265616 PRKAR2AP13861 404 aaKnown RBP12.95□□□□□ -0.34
UBXN8-201ENST00000265616 CECR2Q9BXF3 1484 aa12.87□□□□□ -0.35
UBXN8-201ENST00000265616 CC2D2AQ9P2K1 1620 aa12.87□□□□□ -0.35
UBXN8-201ENST00000265616 SCRIBQ14160 1630 aa12.82□□□□□ -0.36
UBXN8-201ENST00000265616 RSF1Q96T23 1441 aaPredicted RBP12.82□□□□□ -0.36
UBXN8-201ENST00000265616 POTEIP0CG38 1075 aa12.79□□□□□ -0.36
UBXN8-201ENST00000265616 FKBP8Q14318 412 aa12.78□□□□□ -0.36
UBXN8-201ENST00000265616 SPDYE4A6NLX3 237 aa12.76□□□□□ -0.37
UBXN8-201ENST00000265616 DNAJC5Q9H3Z4 198 aa12.76□□□□□ -0.37
UBXN8-201ENST00000265616 EIF4G1Q04637 1599 aaKnown RBP12.76□□□□□ -0.37
UBXN8-201ENST00000265616 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
UBXN8-201ENST00000265616 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
UBXN8-201ENST00000265616 SPDYE2Q495Y8 402 aa12.74□□□□□ -0.37
UBXN8-201ENST00000265616 CLCN6P51797 869 aa12.72□□□□□ -0.37
UBXN8-201ENST00000265616 SPDYE1Q8NFV5 336 aaPredicted RBP12.72□□□□□ -0.37
UBXN8-201ENST00000265616 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
UBXN8-201ENST00000265616 PCDH10Q9P2E7 1040 aa12.72□□□□□ -0.37
UBXN8-201ENST00000265616 POTEMA6NI47 508 aa12.71□□□□□ -0.38
UBXN8-201ENST00000265616 CLEC11AQ9Y240 323 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms