RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.47■■□□□ 1.03
SCAP-201ENST00000265565 WASHC2AQ641Q2 1341 aa21.46■■□□□ 1.03
SCAP-201ENST00000265565 NLRP13Q86W25 1043 aa21.46■■□□□ 1.03
SCAP-201ENST00000265565 ROCK2O75116 1388 aaKnown RBP21.46■■□□□ 1.03
SCAP-201ENST00000265565 MYH16Q9H6N6 1097 aa21.45■■□□□ 1.02
SCAP-201ENST00000265565 NPM1P06748 294 aaKnown RBP eCLIP21.44■■□□□ 1.02
SCAP-201ENST00000265565 SLKQ9H2G2 1235 aaPredicted RBP21.44■■□□□ 1.02
SCAP-201ENST00000265565 PDE4AP27815 886 aa21.44■■□□□ 1.02
SCAP-201ENST00000265565 SLC4A3P48751 1232 aa21.44■■□□□ 1.02
SCAP-201ENST00000265565 RRBP1Q9P2E9 1410 aaKnown RBP21.44■■□□□ 1.02
SCAP-201ENST00000265565 NCLP19338 710 aaKnown RBP21.43■■□□□ 1.02
SCAP-201ENST00000265565 NAP1L5Q96NT1 182 aaPredicted RBP21.42■■□□□ 1.02
SCAP-201ENST00000265565 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
SCAP-201ENST00000265565 U2SURPO15042 1029 aaKnown RBP21.39■■□□□ 1.01
SCAP-201ENST00000265565 LRRC9Q6ZRR7 1453 aa21.38■■□□□ 1.01
SCAP-201ENST00000265565 KIF7Q2M1P5 1343 aa21.38■■□□□ 1.01
SCAP-201ENST00000265565 GOLGA6L22H0YM25 854 aa21.37■■□□□ 1.01
SCAP-201ENST00000265565 RRP1P56182 461 aaKnown RBP21.37■■□□□ 1.01
SCAP-201ENST00000265565 CCDC184Q52MB2 194 aa21.37■■□□□ 1.01
SCAP-201ENST00000265565 CCDC7Q96M83 1385 aa21.36■■□□□ 1.01
SCAP-201ENST00000265565 PDE3BQ13370 1112 aa21.36■■□□□ 1.01
SCAP-201ENST00000265565 FGD6Q6ZV73 1430 aa21.36■■□□□ 1.01
SCAP-201ENST00000265565 ANKRD30AQ9BXX3 1397 aa21.36■■□□□ 1.01
SCAP-201ENST00000265565 HNRNPMP52272 730 aaKnown RBP eCLIP21.35■■□□□ 1.012e-7■■■■■ 28.9
SCAP-201ENST00000265565 CCDC146Q8IYE0 955 aa21.35■■□□□ 1.01
SCAP-201ENST00000265565 MYBBP1AQ9BQG0 1328 aaKnown RBP21.35■■□□□ 1.01
SCAP-201ENST00000265565 MAPK8IP3Q9UPT6 1336 aa21.34■■□□□ 1.01
SCAP-201ENST00000265565 USP47Q96K76 1375 aa21.34■■□□□ 1.01
SCAP-201ENST00000265565 ESF1Q9H501 851 aaKnown RBP21.34■■□□□ 1.01
SCAP-201ENST00000265565 UACAQ9BZF9 1416 aa21.33■■□□□ 1.01
SCAP-201ENST00000265565 GOLGA2Q08379 1002 aa21.33■■□□□ 1.01
SCAP-201ENST00000265565 PLPPR3Q6T4P5 718 aa21.33■■□□□ 1.01
SCAP-201ENST00000265565 GZF1Q9H116 711 aaPredicted RBP21.33■■□□□ 1.01
SCAP-201ENST00000265565 MORC1Q86VD1 984 aa21.32■■□□□ 1
SCAP-201ENST00000265565 KIF15Q9NS87 1388 aa21.32■■□□□ 1
SCAP-201ENST00000265565 CRBNQ96SW2 442 aa21.31■■□□□ 1
SCAP-201ENST00000265565 ZNF644Q9H582 1327 aaPredicted RBP21.3■■□□□ 1
SCAP-201ENST00000265565 PANK3Q9H999 370 aa21.3■■□□□ 1
SCAP-201ENST00000265565 TPRNQ4KMQ1 711 aa21.29■■□□□ 1
SCAP-201ENST00000265565 HSP90AB1P08238 724 aaKnown RBP21.29■■□□□ 1
SCAP-201ENST00000265565 CLUAP1Q96AJ1 413 aa21.29■■□□□ 1
SCAP-201ENST00000265565 PAK3O75914 559 aaPredicted RBP21.28■■□□□ 1
SCAP-201ENST00000265565 WDR97A6NE52 1622 aa21.28■■□□□ 1
SCAP-201ENST00000265565 SAFB2Q14151 953 aaKnown RBP eCLIP21.28■■□□□ 1
SCAP-201ENST00000265565 CNTLNQ9NXG0 1405 aa21.27■■□□□ 1
SCAP-201ENST00000265565 PRXQ9BXM0 1461 aa21.26■□□□□ 0.99
SCAP-201ENST00000265565 HSCBQ8IWL3 235 aa21.24■□□□□ 0.99
SCAP-201ENST00000265565 MSH5O43196 834 aa21.24■□□□□ 0.99
SCAP-201ENST00000265565 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
SCAP-201ENST00000265565 USP35Q9P2H5 1018 aa21.23■□□□□ 0.99
SCAP-201ENST00000265565 L1TD1Q5T7N2 865 aaKnown RBP21.23■□□□□ 0.99
SCAP-201ENST00000265565 MYOM3Q5VTT5 1437 aa21.22■□□□□ 0.99
SCAP-201ENST00000265565 RAD54L2Q9Y4B4 1467 aa21.21■□□□□ 0.99
SCAP-201ENST00000265565 U2AF1L5P0DN76 240 aaPredicted RBP21.21■□□□□ 0.99
SCAP-201ENST00000265565 MS4A1P11836 297 aa21.21■□□□□ 0.99
SCAP-201ENST00000265565 U2AF1Q01081 240 aaKnown RBP eCLIP21.21■□□□□ 0.99
SCAP-201ENST00000265565 NBPF8Q3BBV2 869 aa21.21■□□□□ 0.99
SCAP-201ENST00000265565 ARID4BQ4LE39 1312 aaPredicted RBP21.2■□□□□ 0.98
SCAP-201ENST00000265565 POGKQ9P215 609 aa21.19■□□□□ 0.98
SCAP-201ENST00000265565 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
SCAP-201ENST00000265565 GSE1Q14687 1217 aa21.19■□□□□ 0.98
SCAP-201ENST00000265565 PTMAP06454 111 aaKnown RBP21.18■□□□□ 0.98
SCAP-201ENST00000265565 FAM161AQ3B820 660 aa21.18■□□□□ 0.98
SCAP-201ENST00000265565 FANCD2Q9BXW9 1451 aa21.17■□□□□ 0.98
SCAP-201ENST00000265565 CENPQQ7L2Z9 268 aaPredicted RBP21.17■□□□□ 0.98
SCAP-201ENST00000265565 CDCA7LQ96GN5 454 aa21.17■□□□□ 0.98
SCAP-201ENST00000265565 RWDD1Q9H446 243 aaPredicted RBP21.17■□□□□ 0.98
SCAP-201ENST00000265565 AKNAQ7Z591 1439 aa21.17■□□□□ 0.98
SCAP-201ENST00000265565 PDS5BQ9NTI5 1447 aa21.16■□□□□ 0.98
SCAP-201ENST00000265565 RRP7AQ9Y3A4 280 aaKnown RBP21.16■□□□□ 0.98
SCAP-201ENST00000265565 MFAP1P55081 439 aaKnown RBP21.16■□□□□ 0.98
SCAP-201ENST00000265565 BCL2L13Q9BXK5 485 aa21.15■□□□□ 0.98
SCAP-201ENST00000265565 PLEKHG5O94827 1062 aa21.15■□□□□ 0.98
SCAP-201ENST00000265565 SRPK2P78362 688 aaKnown RBP21.14■□□□□ 0.97
SCAP-201ENST00000265565 CENPJQ9HC77 1338 aaPredicted RBP21.14■□□□□ 0.97
SCAP-201ENST00000265565 ITPRIPQ8IWB1 547 aa21.13■□□□□ 0.97
SCAP-201ENST00000265565 APAF1O14727 1248 aa21.13■□□□□ 0.97
SCAP-201ENST00000265565 DNTTIP2Q5QJE6 756 aaKnown RBP21.13■□□□□ 0.97
SCAP-201ENST00000265565 NCOA2Q15596 1464 aa21.12■□□□□ 0.97
SCAP-201ENST00000265565 CARMIL2Q6F5E8 1435 aa21.12■□□□□ 0.97
SCAP-201ENST00000265565 COG6Q9Y2V7 657 aa21.11■□□□□ 0.97
SCAP-201ENST00000265565 CASKIN1Q8WXD9 1431 aa21.11■□□□□ 0.97
SCAP-201ENST00000265565 STK26Q9P289 416 aa21.11■□□□□ 0.97
SCAP-201ENST00000265565 CASC1Q6TDU7 716 aa21.1■□□□□ 0.97
SCAP-201ENST00000265565 JPH4Q96JJ6 628 aa21.1■□□□□ 0.97
SCAP-201ENST00000265565 GGT6Q6P531 493 aa21.1■□□□□ 0.97
SCAP-201ENST00000265565 PNNQ9H307 717 aaKnown RBP21.1■□□□□ 0.97
SCAP-201ENST00000265565 APBB1O00213 710 aa21.09■□□□□ 0.97
SCAP-201ENST00000265565 PMFBP1Q8TBY8 1022 aa21.09■□□□□ 0.97
SCAP-201ENST00000265565 C11orf95C9JLR9 678 aaPredicted RBP21.08■□□□□ 0.97
SCAP-201ENST00000265565 PLCB2Q00722 1185 aa21.08■□□□□ 0.97
SCAP-201ENST00000265565 ERCC6Q03468 1493 aa21.08■□□□□ 0.97
SCAP-201ENST00000265565 CCDC144AA2RUR9 1427 aa21.07■□□□□ 0.96
SCAP-201ENST00000265565 SMC4Q9NTJ3 1288 aa21.07■□□□□ 0.96
SCAP-201ENST00000265565 CFTRP13569 1480 aa21.07■□□□□ 0.96
SCAP-201ENST00000265565 GOLGA6L3A6NEY3 463 aa21.06■□□□□ 0.96
SCAP-201ENST00000265565 KANK1Q14678 1352 aa21.06■□□□□ 0.96
SCAP-201ENST00000265565 PNISRQ8TF01 805 aaKnown RBP21.05■□□□□ 0.96
SCAP-201ENST00000265565 NFKBIBQ15653 356 aa21.04■□□□□ 0.96
SCAP-201ENST00000265565 EFCAB2Q5VUJ9 269 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms