RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 GZF1Q9H116 711 aaPredicted RBP22.29■■□□□ 1.16
SRF-201ENST00000265354 KIF7Q2M1P5 1343 aa22.28■■□□□ 1.16
SRF-201ENST00000265354 SKAP1Q86WV1 359 aa22.28■■□□□ 1.16
SRF-201ENST00000265354 CCDC18Q5T9S5 1454 aa22.28■■□□□ 1.16
SRF-201ENST00000265354 IGF1RP08069 1367 aa22.28■■□□□ 1.16
SRF-201ENST00000265354 C11orf95C9JLR9 678 aaPredicted RBP22.27■■□□□ 1.16
SRF-201ENST00000265354 AMER1Q5JTC6 1135 aaPredicted RBP22.25■■□□□ 1.15
SRF-201ENST00000265354 BECN1Q14457 450 aa22.25■■□□□ 1.15
SRF-201ENST00000265354 CHMP7Q8WUX9 453 aaPredicted RBP22.23■■□□□ 1.15
SRF-201ENST00000265354 PLEKHD1A6NEE1 506 aa22.23■■□□□ 1.15
SRF-201ENST00000265354 RRP1P56182 461 aaKnown RBP22.22■■□□□ 1.15
SRF-201ENST00000265354 EIF4G1Q04637 1599 aaKnown RBP22.22■■□□□ 1.15
SRF-201ENST00000265354 PKNOX2Q96KN3 472 aa22.22■■□□□ 1.15
SRF-201ENST00000265354 NBPF8Q3BBV2 869 aa22.21■■□□□ 1.15
SRF-201ENST00000265354 CDCA7LQ96GN5 454 aa22.21■■□□□ 1.15
SRF-201ENST00000265354 SLC24A1O60721 1099 aa22.21■■□□□ 1.15
SRF-201ENST00000265354 CRBNQ96SW2 442 aa22.21■■□□□ 1.15
SRF-201ENST00000265354 CCDC7Q96M83 1385 aa22.21■■□□□ 1.15
SRF-201ENST00000265354 ZNF644Q9H582 1327 aaPredicted RBP22.2■■□□□ 1.14
SRF-201ENST00000265354 CCDC146Q8IYE0 955 aa22.19■■□□□ 1.14
SRF-201ENST00000265354 BRPF3Q9ULD4 1205 aa22.19■■□□□ 1.14
SRF-201ENST00000265354 LRRC9Q6ZRR7 1453 aa22.18■■□□□ 1.14
SRF-201ENST00000265354 A0A0U1RQG5 324 aaPredicted RBP22.16■■□□□ 1.14
SRF-201ENST00000265354 ANP32BQ92688 251 aaKnown RBP22.15■■□□□ 1.14
SRF-201ENST00000265354 GSE1Q14687 1217 aa22.14■■□□□ 1.13
SRF-201ENST00000265354 NLRP13Q86W25 1043 aa22.13■■□□□ 1.13
SRF-201ENST00000265354 NUP155O75694 1391 aa22.13■■□□□ 1.13
SRF-201ENST00000265354 CLUAP1Q96AJ1 413 aa22.11■■□□□ 1.13
SRF-201ENST00000265354 TRIM44Q96DX7 344 aaPredicted RBP22.11■■□□□ 1.13
SRF-201ENST00000265354 KTN1Q86UP2 1357 aaKnown RBP22.11■■□□□ 1.13
SRF-201ENST00000265354 TPRNQ4KMQ1 711 aa22.11■■□□□ 1.13
SRF-201ENST00000265354 RALBP1Q15311 655 aa22.1■■□□□ 1.13
SRF-201ENST00000265354 FGD6Q6ZV73 1430 aa22.09■■□□□ 1.13
SRF-201ENST00000265354 NCLP19338 710 aaKnown RBP22.09■■□□□ 1.13
SRF-201ENST00000265354 USP47Q96K76 1375 aa22.09■■□□□ 1.13
SRF-201ENST00000265354 CNTLNQ9NXG0 1405 aa22.09■■□□□ 1.13
SRF-201ENST00000265354 PRXQ9BXM0 1461 aa22.09■■□□□ 1.13
SRF-201ENST00000265354 PODXL2Q9NZ53 605 aa22.08■■□□□ 1.13
SRF-201ENST00000265354 UACAQ9BZF9 1416 aa22.08■■□□□ 1.12
SRF-201ENST00000265354 ROCK2O75116 1388 aaKnown RBP22.08■■□□□ 1.12
SRF-201ENST00000265354 TMF1P82094 1093 aa22.07■■□□□ 1.12
SRF-201ENST00000265354 NFKBIBQ15653 356 aa22.06■■□□□ 1.12
SRF-201ENST00000265354 ARID3AQ99856 593 aa22.06■■□□□ 1.12
SRF-201ENST00000265354 FTSJ3Q8IY81 847 aaKnown RBP22.05■■□□□ 1.12
SRF-201ENST00000265354 PANK3Q9H999 370 aa22.05■■□□□ 1.12
SRF-201ENST00000265354 MYBBP1AQ9BQG0 1328 aaKnown RBP22.03■■□□□ 1.12
SRF-201ENST00000265354 BCL2L13Q9BXK5 485 aa22.03■■□□□ 1.12
SRF-201ENST00000265354 USP35Q9P2H5 1018 aa22.02■■□□□ 1.12
SRF-201ENST00000265354 HNRNPMP52272 730 aaKnown RBP eCLIP22.01■■□□□ 1.11
SRF-201ENST00000265354 GOLGA2Q08379 1002 aa21.99■■□□□ 1.11
SRF-201ENST00000265354 PNISRQ8TF01 805 aaKnown RBP21.98■■□□□ 1.11
SRF-201ENST00000265354 RRP7AQ9Y3A4 280 aaKnown RBP21.98■■□□□ 1.11
SRF-201ENST00000265354 ZBTB7CA1YPR0 619 aa21.98■■□□□ 1.11
SRF-201ENST00000265354 FRAT2O75474 233 aaPredicted RBP21.98■■□□□ 1.11
SRF-201ENST00000265354 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
SRF-201ENST00000265354 KIF15Q9NS87 1388 aa21.95■■□□□ 1.1
SRF-201ENST00000265354 CADPSQ9ULU8 1353 aa21.95■■□□□ 1.1
SRF-201ENST00000265354 U2SURPO15042 1029 aaKnown RBP21.95■■□□□ 1.1
SRF-201ENST00000265354 PDE3BQ13370 1112 aa21.95■■□□□ 1.1
SRF-201ENST00000265354 FAM161AQ3B820 660 aa21.95■■□□□ 1.1
SRF-201ENST00000265354 BACH2Q9BYV9 841 aa21.94■■□□□ 1.1
SRF-201ENST00000265354 COG6Q9Y2V7 657 aa21.94■■□□□ 1.1
SRF-201ENST00000265354 FOXD4L1Q9NU39 408 aa21.94■■□□□ 1.1
SRF-201ENST00000265354 MFAP1P55081 439 aaKnown RBP21.92■■□□□ 1.1
SRF-201ENST00000265354 SAFB2Q14151 953 aaKnown RBP eCLIP21.92■■□□□ 1.1
SRF-201ENST00000265354 APAF1O14727 1248 aa21.91■■□□□ 1.1
SRF-201ENST00000265354 MAPKBP1O60336 1514 aa21.91■■□□□ 1.1
SRF-201ENST00000265354 PNNQ9H307 717 aaKnown RBP21.9■■□□□ 1.1
SRF-201ENST00000265354 HSP90AA2PQ14568 343 aaPredicted RBP21.9■■□□□ 1.1
SRF-201ENST00000265354 PLPPR3Q6T4P5 718 aa21.89■■□□□ 1.1
SRF-201ENST00000265354 CFTRP13569 1480 aa21.89■■□□□ 1.09
SRF-201ENST00000265354 MS4A1P11836 297 aa21.89■■□□□ 1.09
SRF-201ENST00000265354 CDCA8Q53HL2 280 aa21.88■■□□□ 1.09
SRF-201ENST00000265354 FGD5Q6ZNL6 1462 aa21.88■■□□□ 1.09
SRF-201ENST00000265354 MYOM3Q5VTT5 1437 aa21.88■■□□□ 1.09
SRF-201ENST00000265354 ADAMTS8Q9UP79 889 aa21.88■■□□□ 1.09
SRF-201ENST00000265354 HSP90AB1P08238 724 aaKnown RBP21.88■■□□□ 1.09
SRF-201ENST00000265354 CENPQQ7L2Z9 268 aaPredicted RBP21.87■■□□□ 1.09
SRF-201ENST00000265354 ERICH3Q5RHP9 1530 aa21.85■■□□□ 1.09
SRF-201ENST00000265354 NCOA2Q15596 1464 aa21.84■■□□□ 1.09
SRF-201ENST00000265354 NBPF1Q3BBV0 1214 aa21.84■■□□□ 1.09
SRF-201ENST00000265354 L1TD1Q5T7N2 865 aaKnown RBP21.84■■□□□ 1.09
SRF-201ENST00000265354 C20orf194Q5TEA3 1177 aa21.84■■□□□ 1.09
SRF-201ENST00000265354 MORC1Q86VD1 984 aa21.82■■□□□ 1.08
SRF-201ENST00000265354 HSCBQ8IWL3 235 aa21.82■■□□□ 1.08
SRF-201ENST00000265354 NAIPQ13075 1403 aa21.82■■□□□ 1.08
SRF-201ENST00000265354 TIAM1Q13009 1591 aa21.82■■□□□ 1.08
SRF-201ENST00000265354 GOLGA6L3A6NEY3 463 aa21.81■■□□□ 1.08
SRF-201ENST00000265354 CFAP53Q96M91 514 aa21.81■■□□□ 1.08
SRF-201ENST00000265354 ANKRD30AQ9BXX3 1397 aa21.8■■□□□ 1.08
SRF-201ENST00000265354 APBB1O00213 710 aa21.8■■□□□ 1.08
SRF-201ENST00000265354 GOLGA6L22H0YM25 854 aa21.8■■□□□ 1.08
SRF-201ENST00000265354 HFM1A2PYH4 1435 aa21.79■■□□□ 1.08
SRF-201ENST00000265354 PANK1Q8TE04 598 aa21.79■■□□□ 1.08
SRF-201ENST00000265354 CUX1P39880 1505 aa21.79■■□□□ 1.08
SRF-201ENST00000265354 U2AF1L5P0DN76 240 aaPredicted RBP21.79■■□□□ 1.08
SRF-201ENST00000265354 U2AF1Q01081 240 aaKnown RBP eCLIP21.79■■□□□ 1.08
SRF-201ENST00000265354 RSPH6AQ9H0K4 717 aa21.78■■□□□ 1.08
SRF-201ENST00000265354 CDK11BP21127 795 aaKnown RBP21.77■■□□□ 1.08
SRF-201ENST00000265354 SMG6Q86US8 1419 aaKnown RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms