RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 NBPF8Q3BBV2 869 aa18.91■□□□□ 0.62
SCARF1-201ENST00000263071 TMC1Q8TDI8 760 aa18.89■□□□□ 0.61
SCARF1-201ENST00000263071 HSP90AA2PQ14568 343 aaPredicted RBP18.88■□□□□ 0.61
SCARF1-201ENST00000263071 WASHC2CQ9Y4E1 1318 aa18.88■□□□□ 0.61
SCARF1-201ENST00000263071 RBM10P98175 930 aaKnown RBP18.88■□□□□ 0.61
SCARF1-201ENST00000263071 UACAQ9BZF9 1416 aa18.85■□□□□ 0.61
SCARF1-201ENST00000263071 FMN1Q68DA7 1419 aa18.84■□□□□ 0.61
SCARF1-201ENST00000263071 GSE1Q14687 1217 aa18.83■□□□□ 0.61
SCARF1-201ENST00000263071 NAIPQ13075 1403 aa18.83■□□□□ 0.6
SCARF1-201ENST00000263071 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
SCARF1-201ENST00000263071 FGD1P98174 961 aa18.82■□□□□ 0.6
SCARF1-201ENST00000263071 NCOA2Q15596 1464 aa18.81■□□□□ 0.6
SCARF1-201ENST00000263071 PPM1GO15355 546 aaPredicted RBP18.81■□□□□ 0.6
SCARF1-201ENST00000263071 RGL3Q3MIN7 710 aa18.81■□□□□ 0.6
SCARF1-201ENST00000263071 KIF7Q2M1P5 1343 aa18.8■□□□□ 0.6
SCARF1-201ENST00000263071 AKNAQ7Z591 1439 aa18.8■□□□□ 0.6
SCARF1-201ENST00000263071 POLA1P09884 1462 aaPredicted RBP18.8■□□□□ 0.6
SCARF1-201ENST00000263071 FAM43AQ8N2R8 423 aa18.8■□□□□ 0.6
SCARF1-201ENST00000263071 CASKIN1Q8WXD9 1431 aa18.8■□□□□ 0.6
SCARF1-201ENST00000263071 AAMPQ13685 434 aa18.77■□□□□ 0.6
SCARF1-201ENST00000263071 HFM1A2PYH4 1435 aa18.76■□□□□ 0.59
SCARF1-201ENST00000263071 MYOM3Q5VTT5 1437 aa18.76■□□□□ 0.59
SCARF1-201ENST00000263071 SKAP1Q86WV1 359 aa18.76■□□□□ 0.59
SCARF1-201ENST00000263071 PDIA4P13667 645 aaKnown RBP18.75■□□□□ 0.59
SCARF1-201ENST00000263071 NAP1L5Q96NT1 182 aaPredicted RBP18.75■□□□□ 0.59
SCARF1-201ENST00000263071 CCDC7Q96M83 1385 aa18.75■□□□□ 0.59
SCARF1-201ENST00000263071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.75■□□□□ 0.59
SCARF1-201ENST00000263071 HSP90AA1P07900 732 aaKnown RBP18.74■□□□□ 0.59
SCARF1-201ENST00000263071 PKD2Q13563 968 aa18.74■□□□□ 0.59
SCARF1-201ENST00000263071 CARD11Q9BXL7 1154 aa18.74■□□□□ 0.59
SCARF1-201ENST00000263071 CFDP1Q9UEE9 299 aaPredicted RBP18.73■□□□□ 0.59
SCARF1-201ENST00000263071 TOPBP1Q92547 1522 aa18.73■□□□□ 0.59
SCARF1-201ENST00000263071 FYCO1Q9BQS8 1478 aa18.72■□□□□ 0.59
SCARF1-201ENST00000263071 RRP9O43818 475 aaKnown RBP18.71■□□□□ 0.59
SCARF1-201ENST00000263071 CNTLNQ9NXG0 1405 aa18.69■□□□□ 0.58
SCARF1-201ENST00000263071 PLIN1O60240 522 aa18.69■□□□□ 0.58
SCARF1-201ENST00000263071 CC2D1BQ5T0F9 858 aaKnown RBP18.69■□□□□ 0.58
SCARF1-201ENST00000263071 DCAF11Q8TEB1 546 aa18.69■□□□□ 0.58
SCARF1-201ENST00000263071 ZBED9Q6R2W3 1325 aa18.69■□□□□ 0.58
SCARF1-201ENST00000263071 BCL11BQ9C0K0 894 aaPredicted RBP18.69■□□□□ 0.58
SCARF1-201ENST00000263071 FRAT1Q92837 279 aaPredicted RBP18.68■□□□□ 0.58
SCARF1-201ENST00000263071 EXOC6Q8TAG9 804 aa18.65■□□□□ 0.58
SCARF1-201ENST00000263071 ST20-MTHFSA0A0A6YYL1 179 aa18.65■□□□□ 0.58
SCARF1-201ENST00000263071 NUDCQ9Y266 331 aa18.64■□□□□ 0.57
SCARF1-201ENST00000263071 PDS5BQ9NTI5 1447 aa18.64■□□□□ 0.57
SCARF1-201ENST00000263071 PTPN23Q9H3S7 1636 aa18.64■□□□□ 0.57
SCARF1-201ENST00000263071 SLC4A3P48751 1232 aa18.63■□□□□ 0.57
SCARF1-201ENST00000263071 MAP3K1Q13233 1512 aa18.63■□□□□ 0.57
SCARF1-201ENST00000263071 CDK13Q14004 1512 aaKnown RBP18.63■□□□□ 0.57
SCARF1-201ENST00000263071 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
SCARF1-201ENST00000263071 URB2Q14146 1524 aaKnown RBP18.61■□□□□ 0.57
SCARF1-201ENST00000263071 GAPVD1Q14C86 1478 aa18.6■□□□□ 0.57
SCARF1-201ENST00000263071 CDCA7LQ96GN5 454 aa18.59■□□□□ 0.57
SCARF1-201ENST00000263071 DNMBPQ6XZF7 1577 aa18.58■□□□□ 0.57
SCARF1-201ENST00000263071 USP47Q96K76 1375 aa18.58■□□□□ 0.57
SCARF1-201ENST00000263071 PNNQ9H307 717 aaKnown RBP18.57■□□□□ 0.56
SCARF1-201ENST00000263071 SENP3Q9H4L4 574 aaPredicted RBP18.56■□□□□ 0.56
SCARF1-201ENST00000263071 ARXQ96QS3 562 aa18.55■□□□□ 0.56
SCARF1-201ENST00000263071 CHMP7Q8WUX9 453 aaPredicted RBP18.54■□□□□ 0.56
SCARF1-201ENST00000263071 SNAPC4Q5SXM2 1469 aa18.53■□□□□ 0.56
SCARF1-201ENST00000263071 NFKBIBQ15653 356 aa18.53■□□□□ 0.56
SCARF1-201ENST00000263071 KDM6BO15054 1643 aa18.53■□□□□ 0.56
SCARF1-201ENST00000263071 HNRNPMP52272 730 aaKnown RBP eCLIP18.53■□□□□ 0.56
SCARF1-201ENST00000263071 NUP155O75694 1391 aa18.52■□□□□ 0.56
SCARF1-201ENST00000263071 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.52■□□□□ 0.566e-8■■■■□ 21.9
SCARF1-201ENST00000263071 CFAP43Q8NDM7 1665 aa18.52■□□□□ 0.55
SCARF1-201ENST00000263071 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
SCARF1-201ENST00000263071 TSPY4P0CV99 314 aa18.51■□□□□ 0.55
SCARF1-201ENST00000263071 TSPY10P0CW01 314 aa18.51■□□□□ 0.55
SCARF1-201ENST00000263071 AEBP2Q6ZN18 517 aaPredicted RBP18.51■□□□□ 0.55
SCARF1-201ENST00000263071 RCAN3Q9UKA8 241 aa18.51■□□□□ 0.55
SCARF1-201ENST00000263071 ARID4BQ4LE39 1312 aaPredicted RBP18.51■□□□□ 0.55
SCARF1-201ENST00000263071 NCOA1Q15788 1441 aa18.5■□□□□ 0.55
SCARF1-201ENST00000263071 PNISRQ8TF01 805 aaKnown RBP18.49■□□□□ 0.55
SCARF1-201ENST00000263071 ANKRD30BQ9BXX2 1392 aa18.49■□□□□ 0.55
SCARF1-201ENST00000263071 EFCAB5A4FU69 1503 aa18.48■□□□□ 0.55
SCARF1-201ENST00000263071 MAGI3Q5TCQ9 1506 aa18.48■□□□□ 0.55
SCARF1-201ENST00000263071 RGS3P49796 1198 aa18.48■□□□□ 0.55
SCARF1-201ENST00000263071 RRAGDQ9NQL2 400 aaPredicted RBP18.47■□□□□ 0.55
SCARF1-201ENST00000263071 NBPF1Q3BBV0 1214 aa18.46■□□□□ 0.55
SCARF1-201ENST00000263071 PRG4Q92954 1404 aaPredicted RBP18.44■□□□□ 0.54
SCARF1-201ENST00000263071 RRP1P56182 461 aaKnown RBP18.44■□□□□ 0.54
SCARF1-201ENST00000263071 DENND4BO75064 1496 aaPredicted RBP18.44■□□□□ 0.54
SCARF1-201ENST00000263071 PLEKHD1A6NEE1 506 aa18.43■□□□□ 0.54
SCARF1-201ENST00000263071 PDE4AP27815 886 aa18.43■□□□□ 0.54
SCARF1-201ENST00000263071 GRIN2BQ13224 1484 aa18.43■□□□□ 0.54
SCARF1-201ENST00000263071 DDRGK1Q96HY6 314 aa18.42■□□□□ 0.54
SCARF1-201ENST00000263071 EPRSP07814 1512 aaKnown RBP18.42■□□□□ 0.54
SCARF1-201ENST00000263071 SUPT6HQ7KZ85 1726 aaKnown RBP18.42■□□□□ 0.54
SCARF1-201ENST00000263071 ROCK2O75116 1388 aaKnown RBP18.41■□□□□ 0.54
SCARF1-201ENST00000263071 CRBNQ96SW2 442 aa18.4■□□□□ 0.54
SCARF1-201ENST00000263071 KDM5BQ9UGL1 1544 aa18.4■□□□□ 0.54
SCARF1-201ENST00000263071 DAPK1P53355 1430 aa18.4■□□□□ 0.54
SCARF1-201ENST00000263071 EHBP1L1Q8N3D4 1523 aa18.39■□□□□ 0.54
SCARF1-201ENST00000263071 ABCC5O15440 1437 aa18.39■□□□□ 0.53
SCARF1-201ENST00000263071 THOC2Q8NI27 1593 aaKnown RBP18.39■□□□□ 0.53
SCARF1-201ENST00000263071 CTTNBP2Q8WZ74 1663 aa18.39■□□□□ 0.53
SCARF1-201ENST00000263071 LRRIQ1Q96JM4 1722 aa18.38■□□□□ 0.53
SCARF1-201ENST00000263071 TAF7LQ5H9L4 462 aa18.38■□□□□ 0.53
SCARF1-201ENST00000263071 CCDC146Q8IYE0 955 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms