RNA–Protein interactions for RNA: ENST00000262741.9

PIK3R3-201, Transcript of phosphoinositide-3-kinase regulatory subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PIK3R3, Length 5,609 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3R3-201ENST00000262741 MYT1Q01538 1121 aa15.56■□□□□ 0.08
PIK3R3-201ENST00000262741 GRIN2BQ13224 1484 aa15.55■□□□□ 0.08
PIK3R3-201ENST00000262741 UPF2Q9HAU5 1272 aaKnown RBP15.55■□□□□ 0.08
PIK3R3-201ENST00000262741 HMGXB3Q12766 1538 aa15.54■□□□□ 0.08
PIK3R3-201ENST00000262741 U2SURPO15042 1029 aaKnown RBP15.54■□□□□ 0.08
PIK3R3-201ENST00000262741 SOX12O15370 315 aa15.53■□□□□ 0.08
PIK3R3-201ENST00000262741 MRC2Q9UBG0 1479 aa15.53■□□□□ 0.08
PIK3R3-201ENST00000262741 MYH16Q9H6N6 1097 aa15.53■□□□□ 0.08
PIK3R3-201ENST00000262741 L3MBTL2Q969R5 705 aa15.51■□□□□ 0.07
PIK3R3-201ENST00000262741 ROCK2O75116 1388 aaKnown RBP15.51■□□□□ 0.07
PIK3R3-201ENST00000262741 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
PIK3R3-201ENST00000262741 LAS1LQ9Y4W2 734 aaKnown RBP15.5■□□□□ 0.07
PIK3R3-201ENST00000262741 FAM69CQ0P6D2 419 aa15.5■□□□□ 0.07
PIK3R3-201ENST00000262741 HSP90AA1P07900 732 aaKnown RBP15.49■□□□□ 0.07
PIK3R3-201ENST00000262741 MORC1Q86VD1 984 aa15.49■□□□□ 0.07
PIK3R3-201ENST00000262741 NUTM2DQ5VT03 806 aaPredicted RBP15.49■□□□□ 0.07
PIK3R3-201ENST00000262741 EID1Q9Y6B2 187 aa15.49■□□□□ 0.07
PIK3R3-201ENST00000262741 ARXQ96QS3 562 aa15.48■□□□□ 0.07
PIK3R3-201ENST00000262741 HDGFL2Q7Z4V5 671 aaPredicted RBP15.47■□□□□ 0.07
PIK3R3-201ENST00000262741 TOPBP1Q92547 1522 aa15.46■□□□□ 0.07
PIK3R3-201ENST00000262741 IFT140Q96RY7 1462 aa15.46■□□□□ 0.07
PIK3R3-201ENST00000262741 BICRAQ9NZM4 1560 aa15.46■□□□□ 0.06
PIK3R3-201ENST00000262741 SYNJ1O43426 1573 aa15.43■□□□□ 0.06
PIK3R3-201ENST00000262741 POLA1P09884 1462 aaPredicted RBP15.43■□□□□ 0.06
PIK3R3-201ENST00000262741 PNNQ9H307 717 aaKnown RBP15.43■□□□□ 0.06
PIK3R3-201ENST00000262741 ZNF644Q9H582 1327 aaPredicted RBP15.42■□□□□ 0.06
PIK3R3-201ENST00000262741 PAK3O75914 559 aaPredicted RBP15.42■□□□□ 0.06
PIK3R3-201ENST00000262741 PRG4Q92954 1404 aaPredicted RBP15.41■□□□□ 0.06
PIK3R3-201ENST00000262741 FTSJ3Q8IY81 847 aaKnown RBP15.4■□□□□ 0.06
PIK3R3-201ENST00000262741 CCDC144AA2RUR9 1427 aa15.4■□□□□ 0.06
PIK3R3-201ENST00000262741 MYOM3Q5VTT5 1437 aa15.4■□□□□ 0.06
PIK3R3-201ENST00000262741 SUPT16HQ9Y5B9 1047 aaKnown RBP15.39■□□□□ 0.05
PIK3R3-201ENST00000262741 EIF3AQ14152 1382 aaKnown RBP15.39■□□□□ 0.05
PIK3R3-201ENST00000262741 CUX1P39880 1505 aa15.38■□□□□ 0.05
PIK3R3-201ENST00000262741 KTN1Q86UP2 1357 aaKnown RBP15.37■□□□□ 0.05
PIK3R3-201ENST00000262741 TRAK1Q9UPV9 953 aa15.37■□□□□ 0.05
PIK3R3-201ENST00000262741 FRAT1Q92837 279 aaPredicted RBP15.37■□□□□ 0.05
PIK3R3-201ENST00000262741 KIF21BO75037 1637 aa15.36■□□□□ 0.05
PIK3R3-201ENST00000262741 CASKIN1Q8WXD9 1431 aa15.35■□□□□ 0.05
PIK3R3-201ENST00000262741 FGD6Q6ZV73 1430 aa15.35■□□□□ 0.05
PIK3R3-201ENST00000262741 VGFO15240 615 aaPredicted RBP15.34■□□□□ 0.05
PIK3R3-201ENST00000262741 TERF2IPQ9NYB0 399 aa15.34■□□□□ 0.05
PIK3R3-201ENST00000262741 SNAPC4Q5SXM2 1469 aa15.34■□□□□ 0.05
PIK3R3-201ENST00000262741 DHX57Q6P158 1386 aaKnown RBP15.33■□□□□ 0.05
PIK3R3-201ENST00000262741 NUTM2FA1L443 756 aa15.33■□□□□ 0.04
PIK3R3-201ENST00000262741 CCER2I3L3R5 266 aa15.33■□□□□ 0.04
PIK3R3-201ENST00000262741 PRDM2Q13029 1718 aa15.33■□□□□ 0.04
PIK3R3-201ENST00000262741 TOP2BQ02880 1626 aa15.33■□□□□ 0.04
PIK3R3-201ENST00000262741 ERICH3Q5RHP9 1530 aa15.33■□□□□ 0.04
PIK3R3-201ENST00000262741 PHLDB1Q86UU1 1377 aa15.32■□□□□ 0.04
PIK3R3-201ENST00000262741 KIF15Q9NS87 1388 aa15.32■□□□□ 0.04
PIK3R3-201ENST00000262741 NGDNQ8NEJ9 315 aaKnown RBP15.32■□□□□ 0.04
PIK3R3-201ENST00000262741 AFAP1Q8N556 730 aa15.32■□□□□ 0.04
PIK3R3-201ENST00000262741 SYNJ2O15056 1496 aa15.32■□□□□ 0.04
PIK3R3-201ENST00000262741 U2AF1L5P0DN76 240 aaPredicted RBP15.32■□□□□ 0.04
PIK3R3-201ENST00000262741 U2AF1Q01081 240 aaKnown RBP eCLIP15.32■□□□□ 0.04
PIK3R3-201ENST00000262741 DNMBPQ6XZF7 1577 aa15.31■□□□□ 0.04
PIK3R3-201ENST00000262741 LRRC9Q6ZRR7 1453 aa15.31■□□□□ 0.04
PIK3R3-201ENST00000262741 PRXQ9BXM0 1461 aa15.31■□□□□ 0.04
PIK3R3-201ENST00000262741 ST20-MTHFSA0A0A6YYL1 179 aa15.3■□□□□ 0.04
PIK3R3-201ENST00000262741 CSB-PGBD3P0DP91 1061 aa15.3■□□□□ 0.04
PIK3R3-201ENST00000262741 RALBP1Q15311 655 aa15.3■□□□□ 0.04
PIK3R3-201ENST00000262741 UACAQ9BZF9 1416 aa15.3■□□□□ 0.04
PIK3R3-201ENST00000262741 RTF1Q92541 710 aaKnown RBP15.3■□□□□ 0.04
PIK3R3-201ENST00000262741 ARAP1Q96P48 1450 aa15.29■□□□□ 0.04
PIK3R3-201ENST00000262741 NCOA2Q15596 1464 aa15.28■□□□□ 0.04
PIK3R3-201ENST00000262741 NPHP1O15259 732 aa15.27■□□□□ 0.03
PIK3R3-201ENST00000262741 MS4A1P11836 297 aa15.27■□□□□ 0.03
PIK3R3-201ENST00000262741 LAMC3Q9Y6N6 1575 aa15.26■□□□□ 0.03
PIK3R3-201ENST00000262741 FYCO1Q9BQS8 1478 aa15.26■□□□□ 0.03
PIK3R3-201ENST00000262741 CHMP4BQ9H444 224 aaKnown RBP15.25■□□□□ 0.03
PIK3R3-201ENST00000262741 ANKRD50Q9ULJ7 1429 aa15.24■□□□□ 0.03
PIK3R3-201ENST00000262741 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.24■□□□□ 0.03
PIK3R3-201ENST00000262741 ARHGAP5Q13017 1502 aa15.23■□□□□ 0.03
PIK3R3-201ENST00000262741 ABCA10Q8WWZ4 1543 aa15.21■□□□□ 0.03
PIK3R3-201ENST00000262741 EFCAB5A4FU69 1503 aa15.2■□□□□ 0.02
PIK3R3-201ENST00000262741 MINK1Q8N4C8 1332 aaPredicted RBP15.2■□□□□ 0.02
PIK3R3-201ENST00000262741 AMPHP49418 695 aa15.2■□□□□ 0.02
PIK3R3-201ENST00000262741 NLRP13Q86W25 1043 aa15.2■□□□□ 0.02
PIK3R3-201ENST00000262741 KIAA0586Q9BVV6 1533 aa15.19■□□□□ 0.02
PIK3R3-201ENST00000262741 OS9Q13438 667 aaPredicted RBP15.19■□□□□ 0.02
PIK3R3-201ENST00000262741 EVC2Q86UK5 1308 aa15.19■□□□□ 0.02
PIK3R3-201ENST00000262741 PPP4R2Q9NY27 417 aa15.19■□□□□ 0.02
PIK3R3-201ENST00000262741 RGS3P49796 1198 aa15.18■□□□□ 0.02
PIK3R3-201ENST00000262741 PANK3Q9H999 370 aa15.18■□□□□ 0.02
PIK3R3-201ENST00000262741 CALD1Q05682 793 aaKnown RBP15.18■□□□□ 0.02
PIK3R3-201ENST00000262741 CCDC9Q9Y3X0 531 aaKnown RBP15.18■□□□□ 0.02
PIK3R3-201ENST00000262741 TROQ12816 1431 aaPredicted RBP15.17■□□□□ 0.02
PIK3R3-201ENST00000262741 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.17■□□□□ 0.02
PIK3R3-201ENST00000262741 LTV1Q96GA3 475 aaPredicted RBP15.17■□□□□ 0.02
PIK3R3-201ENST00000262741 USP47Q96K76 1375 aa15.16■□□□□ 0.02
PIK3R3-201ENST00000262741 ANP32BQ92688 251 aaKnown RBP15.15■□□□□ 0.02
PIK3R3-201ENST00000262741 CASC1Q6TDU7 716 aa15.15■□□□□ 0.02
PIK3R3-201ENST00000262741 STAC3Q96MF2 364 aa15.13■□□□□ 0.01
PIK3R3-201ENST00000262741 RAPGEF3O95398 923 aa15.13■□□□□ 0.01
PIK3R3-201ENST00000262741 SCAPERQ9BY12 1400 aa15.13■□□□□ 0.01
PIK3R3-201ENST00000262741 IPO8O15397 1037 aaKnown RBP15.12■□□□□ 0.01
PIK3R3-201ENST00000262741 BECN1Q14457 450 aa15.12■□□□□ 0.01
PIK3R3-201ENST00000262741 B4GALNT3Q6L9W6 998 aa15.12■□□□□ 0.01
PIK3R3-201ENST00000262741 CCDC146Q8IYE0 955 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms