RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 GPATCH8Q9UKJ3 1502 aaKnown RBP32.11■■■□□ 2.73
RTCA-201ENST00000260563 FANCAO15360 1455 aa32.09■■■□□ 2.73
RTCA-201ENST00000260563 NEO1Q92859 1461 aa32.07■■■□□ 2.72
RTCA-201ENST00000260563 PPARGC1BQ86YN6 1023 aaKnown RBP32.01■■■□□ 2.72
RTCA-201ENST00000260563 MYOM3Q5VTT5 1437 aa32■■■□□ 2.71
RTCA-201ENST00000260563 PHLDB1Q86UU1 1377 aa31.99■■■□□ 2.71
RTCA-201ENST00000260563 KDM6BO15054 1643 aa31.98■■■□□ 2.71
RTCA-201ENST00000260563 EFCAB2Q5VUJ9 269 aa31.98■■■□□ 2.71
RTCA-201ENST00000260563 SAMD9LQ8IVG5 1584 aa31.98■■■□□ 2.71
RTCA-201ENST00000260563 AKNAQ7Z591 1439 aa31.97■■■□□ 2.71
RTCA-201ENST00000260563 CFDP1Q9UEE9 299 aaPredicted RBP31.96■■■□□ 2.71
RTCA-201ENST00000260563 ABCC1P33527 1531 aa31.94■■■□□ 2.7
RTCA-201ENST00000260563 ADGRL1O94910 1474 aa31.94■■■□□ 2.7
RTCA-201ENST00000260563 MIA2Q96PC5 1412 aa31.91■■■□□ 2.7
RTCA-201ENST00000260563 ZNF777Q9ULD5 760 aaPredicted RBP31.9■■■□□ 2.7
RTCA-201ENST00000260563 PTPN23Q9H3S7 1636 aa31.89■■■□□ 2.7
RTCA-201ENST00000260563 CAMSAP2Q08AD1 1489 aa31.89■■■□□ 2.69
RTCA-201ENST00000260563 PLEKHH2Q8IVE3 1493 aa31.88■■■□□ 2.69
RTCA-201ENST00000260563 FGD6Q6ZV73 1430 aa31.87■■■□□ 2.69
RTCA-201ENST00000260563 RICTORQ6R327 1708 aa31.87■■■□□ 2.69
RTCA-201ENST00000260563 SYCP2Q9BX26 1530 aa31.87■■■□□ 2.69
RTCA-201ENST00000260563 SCAPERQ9BY12 1400 aa31.84■■■□□ 2.69
RTCA-201ENST00000260563 DENND4BO75064 1496 aaPredicted RBP31.83■■■□□ 2.69
RTCA-201ENST00000260563 COL17A1Q9UMD9 1497 aaPredicted RBP31.83■■■□□ 2.69
RTCA-201ENST00000260563 FRMPD1Q5SYB0 1578 aa31.82■■■□□ 2.69
RTCA-201ENST00000260563 KIAA1107Q9UPP5 1409 aa31.8■■■□□ 2.68
RTCA-201ENST00000260563 ARHGEF12Q9NZN5 1544 aa31.8■■■□□ 2.68
RTCA-201ENST00000260563 POGZQ7Z3K3 1410 aa31.79■■■□□ 2.68
RTCA-201ENST00000260563 ZNF644Q9H582 1327 aaPredicted RBP31.79■■■□□ 2.68
RTCA-201ENST00000260563 TCOF1Q13428 1488 aaKnown RBP31.78■■■□□ 2.68
RTCA-201ENST00000260563 ZNF518AQ6AHZ1 1483 aa31.76■■■□□ 2.68
RTCA-201ENST00000260563 ARHGEF5Q12774 1597 aa31.74■■■□□ 2.67
RTCA-201ENST00000260563 KDM5CP41229 1560 aa31.74■■■□□ 2.67
RTCA-201ENST00000260563 ZMYM4Q5VZL5 1548 aa31.72■■■□□ 2.67
RTCA-201ENST00000260563 MBD5Q9P267 1494 aa31.71■■■□□ 2.67
RTCA-201ENST00000260563 RAPGEF3O95398 923 aa31.71■■■□□ 2.67
RTCA-201ENST00000260563 TRAPPC8Q9Y2L5 1435 aa31.71■■■□□ 2.67
RTCA-201ENST00000260563 CROCC2H7BZ55 1655 aa31.7■■■□□ 2.67
RTCA-201ENST00000260563 HNRNPMP52272 730 aaKnown RBP eCLIP31.7■■■□□ 2.66
RTCA-201ENST00000260563 CCDC141Q6ZP82 1450 aa31.69■■■□□ 2.66
RTCA-201ENST00000260563 HECW2Q9P2P5 1572 aa31.69■■■□□ 2.66
RTCA-201ENST00000260563 RRBP1Q9P2E9 1410 aaKnown RBP31.69■■■□□ 2.66
RTCA-201ENST00000260563 DNMT1P26358 1616 aaKnown RBP31.68■■■□□ 2.66
RTCA-201ENST00000260563 FAM50AQ14320 339 aaKnown RBP31.64■■■□□ 2.66
RTCA-201ENST00000260563 AFAP1Q8N556 730 aa31.63■■■□□ 2.65
RTCA-201ENST00000260563 INO80Q9ULG1 1556 aaPredicted RBP31.62■■■□□ 2.65
RTCA-201ENST00000260563 RSPH4AQ5TD94 716 aa31.6■■■□□ 2.65
RTCA-201ENST00000260563 KIDINS220Q9ULH0 1771 aa31.6■■■□□ 2.65
RTCA-201ENST00000260563 ARHGEF40Q8TER5 1519 aa31.6■■■□□ 2.65
RTCA-201ENST00000260563 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.59■■■□□ 2.65
RTCA-201ENST00000260563 MAGI2Q86UL8 1455 aa31.59■■■□□ 2.65
RTCA-201ENST00000260563 ZFYVE16Q7Z3T8 1539 aa31.59■■■□□ 2.65
RTCA-201ENST00000260563 DAPK1P53355 1430 aa31.58■■■□□ 2.65
RTCA-201ENST00000260563 ATP7AQ04656 1500 aa31.58■■■□□ 2.65
RTCA-201ENST00000260563 MLH3Q9UHC1 1453 aa31.57■■■□□ 2.65
RTCA-201ENST00000260563 MAST1Q9Y2H9 1570 aa31.57■■■□□ 2.64
RTCA-201ENST00000260563 TRIM26Q12899 539 aaPredicted RBP31.55■■■□□ 2.64
RTCA-201ENST00000260563 SHANK2Q9UPX8 1470 aa31.55■■■□□ 2.64
RTCA-201ENST00000260563 ABCC5O15440 1437 aa31.55■■■□□ 2.64
RTCA-201ENST00000260563 ABCA6Q8N139 1617 aa31.54■■■□□ 2.64
RTCA-201ENST00000260563 SPAG9O60271 1321 aaKnown RBP31.54■■■□□ 2.64
RTCA-201ENST00000260563 ADGBQ8N7X0 1667 aa31.53■■■□□ 2.64
RTCA-201ENST00000260563 MYT1LQ9UL68 1186 aa31.52■■■□□ 2.64
RTCA-201ENST00000260563 C9orf84Q5VXU9 1444 aa31.51■■■□□ 2.63
RTCA-201ENST00000260563 DIP2CQ9Y2E4 1556 aa31.51■■■□□ 2.63
RTCA-201ENST00000260563 RTEL1-TNFRSF6BF6WH68 1400 aa31.5■■■□□ 2.63
RTCA-201ENST00000260563 YEATS2Q9ULM3 1422 aa31.5■■■□□ 2.63
RTCA-201ENST00000260563 TSPY4P0CV99 314 aa31.49■■■□□ 2.63
RTCA-201ENST00000260563 TSPY10P0CW01 314 aa31.49■■■□□ 2.63
RTCA-201ENST00000260563 PLXNC1O60486 1568 aa31.47■■■□□ 2.63
RTCA-201ENST00000260563 REREQ9P2R6 1566 aa31.4■■■□□ 2.62
RTCA-201ENST00000260563 ATP10AO60312 1499 aa31.39■■■□□ 2.62
RTCA-201ENST00000260563 ADGRL2O95490 1459 aa31.39■■■□□ 2.62
RTCA-201ENST00000260563 ITGAEP38570 1179 aa31.39■■■□□ 2.61
RTCA-201ENST00000260563 PTPRKQ15262 1439 aa31.38■■■□□ 2.61
RTCA-201ENST00000260563 SIGLEC1Q9BZZ2 1709 aa31.36■■■□□ 2.61
RTCA-201ENST00000260563 CHIC2Q9UKJ5 165 aa31.35■■■□□ 2.61
RTCA-201ENST00000260563 ANKRD30AQ9BXX3 1397 aa31.34■■■□□ 2.61
RTCA-201ENST00000260563 PCGF6Q9BYE7 350 aa31.34■■■□□ 2.61
RTCA-201ENST00000260563 A2MP01023 1474 aa31.32■■■□□ 2.6
RTCA-201ENST00000260563 DUOX2Q9NRD8 1548 aa31.3■■■□□ 2.6
RTCA-201ENST00000260563 NCOA1Q15788 1441 aa31.3■■■□□ 2.6
RTCA-201ENST00000260563 ROCK1Q13464 1354 aa31.29■■■□□ 2.6
RTCA-201ENST00000260563 KIF15Q9NS87 1388 aa31.29■■■□□ 2.6
RTCA-201ENST00000260563 EIF2AK4Q9P2K8 1649 aaKnown RBP31.26■■■□□ 2.59
RTCA-201ENST00000260563 GCC2Q8IWJ2 1684 aa31.25■■■□□ 2.59
RTCA-201ENST00000260563 AGLP35573 1532 aa31.25■■■□□ 2.59
RTCA-201ENST00000260563 BCORL1Q5H9F3 1711 aa31.24■■■□□ 2.59
RTCA-201ENST00000260563 RRP7BPQ9NSQ0 103 aa31.24■■■□□ 2.59
RTCA-201ENST00000260563 DHX29Q7Z478 1369 aaKnown RBP31.24■■■□□ 2.59
RTCA-201ENST00000260563 ERBINQ96RT1 1412 aa31.21■■■□□ 2.59
RTCA-201ENST00000260563 ARID4BQ4LE39 1312 aaPredicted RBP31.19■■■□□ 2.58
RTCA-201ENST00000260563 RNF17Q9BXT8 1623 aaKnown RBP31.14■■■□□ 2.58
RTCA-201ENST00000260563 ANKRD50Q9ULJ7 1429 aa31.13■■■□□ 2.57
RTCA-201ENST00000260563 HFM1A2PYH4 1435 aa31.13■■■□□ 2.57
RTCA-201ENST00000260563 NAIPQ13075 1403 aa31.1■■■□□ 2.57
RTCA-201ENST00000260563 FER1L4A9Z1Z3 1794 aa31.1■■■□□ 2.57
RTCA-201ENST00000260563 DEPDC5O75140 1603 aa31.09■■■□□ 2.57
RTCA-201ENST00000260563 ADAMTSL3P82987 1691 aa31.08■■■□□ 2.57
RTCA-201ENST00000260563 KIF3BO15066 747 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms