RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 TARBP1Q13395 1621 aaKnown RBP18.87■□□□□ 0.61
LIMD2-201ENST00000259006 BRPF3Q9ULD4 1205 aa18.87■□□□□ 0.61
LIMD2-201ENST00000259006 IFT140Q96RY7 1462 aa18.85■□□□□ 0.61
LIMD2-201ENST00000259006 GLIPR1L2Q4G1C9 344 aa18.85■□□□□ 0.61
LIMD2-201ENST00000259006 UACAQ9BZF9 1416 aa18.83■□□□□ 0.61
LIMD2-201ENST00000259006 WDR62O43379 1518 aa18.83■□□□□ 0.6
LIMD2-201ENST00000259006 GRIN2BQ13224 1484 aa18.82■□□□□ 0.6
LIMD2-201ENST00000259006 ABCA5Q8WWZ7 1642 aa18.81■□□□□ 0.6
LIMD2-201ENST00000259006 SNAPC4Q5SXM2 1469 aa18.8■□□□□ 0.6
LIMD2-201ENST00000259006 AKNAQ7Z591 1439 aa18.8■□□□□ 0.6
LIMD2-201ENST00000259006 MAP3K1Q13233 1512 aa18.79■□□□□ 0.6
LIMD2-201ENST00000259006 NAIPQ13075 1403 aa18.79■□□□□ 0.6
LIMD2-201ENST00000259006 NBPF8Q3BBV2 869 aa18.78■□□□□ 0.6
LIMD2-201ENST00000259006 MPHOSPH9Q99550 1183 aa18.78■□□□□ 0.6
LIMD2-201ENST00000259006 HFM1A2PYH4 1435 aa18.76■□□□□ 0.59
LIMD2-201ENST00000259006 THOC2Q8NI27 1593 aaKnown RBP18.74■□□□□ 0.59
LIMD2-201ENST00000259006 CUL7Q14999 1698 aa18.74■□□□□ 0.59
LIMD2-201ENST00000259006 ZBED9Q6R2W3 1325 aa18.74■□□□□ 0.59
LIMD2-201ENST00000259006 ANP32AP39687 249 aaKnown RBP18.74■□□□□ 0.59
LIMD2-201ENST00000259006 FMN1Q68DA7 1419 aa18.73■□□□□ 0.59
LIMD2-201ENST00000259006 CASKIN1Q8WXD9 1431 aa18.73■□□□□ 0.59
LIMD2-201ENST00000259006 CNTLNQ9NXG0 1405 aa18.73■□□□□ 0.59
LIMD2-201ENST00000259006 CCDC7Q96M83 1385 aa18.72■□□□□ 0.59
LIMD2-201ENST00000259006 ZBTB47Q9UFB7 747 aaPredicted RBP18.72■□□□□ 0.59
LIMD2-201ENST00000259006 KIF7Q2M1P5 1343 aa18.71■□□□□ 0.59
LIMD2-201ENST00000259006 LAS1LQ9Y4W2 734 aaKnown RBP18.71■□□□□ 0.59
LIMD2-201ENST00000259006 PTPN23Q9H3S7 1636 aa18.7■□□□□ 0.58
LIMD2-201ENST00000259006 EIF4G3O43432 1585 aaKnown RBP18.7■□□□□ 0.58
LIMD2-201ENST00000259006 NCOA2Q15596 1464 aa18.7■□□□□ 0.58
LIMD2-201ENST00000259006 FYCO1Q9BQS8 1478 aa18.69■□□□□ 0.58
LIMD2-201ENST00000259006 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
LIMD2-201ENST00000259006 PBRM1Q86U86 1689 aa18.68■□□□□ 0.58
LIMD2-201ENST00000259006 CFAP43Q8NDM7 1665 aa18.68■□□□□ 0.58
LIMD2-201ENST00000259006 NEFMP07197 916 aa18.68■□□□□ 0.58
LIMD2-201ENST00000259006 RSPH6AQ9H0K4 717 aa18.67■□□□□ 0.58
LIMD2-201ENST00000259006 MYOM3Q5VTT5 1437 aa18.66■□□□□ 0.58
LIMD2-201ENST00000259006 KDM5BQ9UGL1 1544 aa18.65■□□□□ 0.58
LIMD2-201ENST00000259006 JPH4Q96JJ6 628 aa18.64■□□□□ 0.57
LIMD2-201ENST00000259006 IPO9Q96P70 1041 aaKnown RBP18.64■□□□□ 0.57
LIMD2-201ENST00000259006 TMC1Q8TDI8 760 aa18.64■□□□□ 0.57
LIMD2-201ENST00000259006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.63■□□□□ 0.57
LIMD2-201ENST00000259006 SKAP1Q86WV1 359 aa18.63■□□□□ 0.57
LIMD2-201ENST00000259006 ADAMTS12P58397 1594 aa18.63■□□□□ 0.57
LIMD2-201ENST00000259006 ZNF644Q9H582 1327 aaPredicted RBP18.62■□□□□ 0.57
LIMD2-201ENST00000259006 NUDCQ9Y266 331 aa18.62■□□□□ 0.57
LIMD2-201ENST00000259006 GRIN2AQ12879 1464 aa18.6■□□□□ 0.57
LIMD2-201ENST00000259006 ZNF777Q9ULD5 760 aaPredicted RBP18.6■□□□□ 0.57
LIMD2-201ENST00000259006 KDM2AQ9Y2K7 1162 aa18.6■□□□□ 0.57
LIMD2-201ENST00000259006 CTTNBP2Q8WZ74 1663 aa18.59■□□□□ 0.57
LIMD2-201ENST00000259006 KDM6BO15054 1643 aa18.57■□□□□ 0.56
LIMD2-201ENST00000259006 EXOC6Q8TAG9 804 aa18.57■□□□□ 0.56
LIMD2-201ENST00000259006 NCOA1Q15788 1441 aa18.57■□□□□ 0.56
LIMD2-201ENST00000259006 DENND4BO75064 1496 aaPredicted RBP18.57■□□□□ 0.56
LIMD2-201ENST00000259006 RBM10P98175 930 aaKnown RBP18.55■□□□□ 0.56
LIMD2-201ENST00000259006 IQGAP2Q13576 1575 aa18.55■□□□□ 0.56
LIMD2-201ENST00000259006 PDE4CQ08493 712 aa18.54■□□□□ 0.56
LIMD2-201ENST00000259006 SYNJ2O15056 1496 aa18.54■□□□□ 0.56
LIMD2-201ENST00000259006 WASHC2CQ9Y4E1 1318 aa18.53■□□□□ 0.56
LIMD2-201ENST00000259006 MAGI1Q96QZ7 1491 aaPredicted RBP18.52■□□□□ 0.56
LIMD2-201ENST00000259006 PLIN1O60240 522 aa18.52■□□□□ 0.55
LIMD2-201ENST00000259006 AEBP2Q6ZN18 517 aaPredicted RBP18.51■□□□□ 0.55
LIMD2-201ENST00000259006 EFCAB5A4FU69 1503 aa18.5■□□□□ 0.55
LIMD2-201ENST00000259006 KIAA0586Q9BVV6 1533 aa18.5■□□□□ 0.55
LIMD2-201ENST00000259006 SLC4A3P48751 1232 aa18.48■□□□□ 0.55
LIMD2-201ENST00000259006 SMG6Q86US8 1419 aaKnown RBP18.48■□□□□ 0.55
LIMD2-201ENST00000259006 MAGI3Q5TCQ9 1506 aa18.47■□□□□ 0.55
LIMD2-201ENST00000259006 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
LIMD2-201ENST00000259006 FGD1P98174 961 aa18.46■□□□□ 0.55
LIMD2-201ENST00000259006 AAMPQ13685 434 aa18.46■□□□□ 0.55
LIMD2-201ENST00000259006 ANKRD30BQ9BXX2 1392 aa18.45■□□□□ 0.54
LIMD2-201ENST00000259006 CDCA7LQ96GN5 454 aa18.45■□□□□ 0.54
LIMD2-201ENST00000259006 CEP170Q5SW79 1584 aa18.45■□□□□ 0.54
LIMD2-201ENST00000259006 PDE4AP27815 886 aa18.44■□□□□ 0.54
LIMD2-201ENST00000259006 CARD11Q9BXL7 1154 aa18.44■□□□□ 0.54
LIMD2-201ENST00000259006 USP47Q96K76 1375 aa18.44■□□□□ 0.54
LIMD2-201ENST00000259006 PKD2Q13563 968 aa18.44■□□□□ 0.54
LIMD2-201ENST00000259006 HSP90AA2PQ14568 343 aaPredicted RBP18.44■□□□□ 0.54
LIMD2-201ENST00000259006 CDK13Q14004 1512 aaKnown RBP18.43■□□□□ 0.54
LIMD2-201ENST00000259006 GSE1Q14687 1217 aa18.43■□□□□ 0.54
LIMD2-201ENST00000259006 SUPT6HQ7KZ85 1726 aaKnown RBP18.42■□□□□ 0.54
LIMD2-201ENST00000259006 LRRIQ1Q96JM4 1722 aa18.41■□□□□ 0.54
LIMD2-201ENST00000259006 ST20-MTHFSA0A0A6YYL1 179 aa18.41■□□□□ 0.54
LIMD2-201ENST00000259006 RRP1P56182 461 aaKnown RBP18.41■□□□□ 0.54
LIMD2-201ENST00000259006 RCAN3Q9UKA8 241 aa18.41■□□□□ 0.54
LIMD2-201ENST00000259006 DHX29Q7Z478 1369 aaKnown RBP18.41■□□□□ 0.54
LIMD2-201ENST00000259006 BCL11BQ9C0K0 894 aaPredicted RBP18.4■□□□□ 0.54
LIMD2-201ENST00000259006 SAMD9Q5K651 1589 aa18.4■□□□□ 0.54
LIMD2-201ENST00000259006 DISP1Q96F81 1524 aa18.4■□□□□ 0.54
LIMD2-201ENST00000259006 CARMIL2Q6F5E8 1435 aa18.4■□□□□ 0.54
LIMD2-201ENST00000259006 PRG4Q92954 1404 aaPredicted RBP18.4■□□□□ 0.54
LIMD2-201ENST00000259006 PLB1Q6P1J6 1458 aa18.39■□□□□ 0.54
LIMD2-201ENST00000259006 USP35Q9P2H5 1018 aa18.39■□□□□ 0.53
LIMD2-201ENST00000259006 FRAT1Q92837 279 aaPredicted RBP18.38■□□□□ 0.53
LIMD2-201ENST00000259006 CC2D1BQ5T0F9 858 aaKnown RBP18.37■□□□□ 0.53
LIMD2-201ENST00000259006 UGGT2Q9NYU1 1516 aa18.37■□□□□ 0.53
LIMD2-201ENST00000259006 RPRD2Q5VT52 1461 aaKnown RBP18.37■□□□□ 0.53
LIMD2-201ENST00000259006 EHBP1L1Q8N3D4 1523 aa18.37■□□□□ 0.53
LIMD2-201ENST00000259006 SPATA31E1Q6ZUB1 1445 aa18.36■□□□□ 0.53
LIMD2-201ENST00000259006 FAM43AQ8N2R8 423 aa18.36■□□□□ 0.53
LIMD2-201ENST00000259006 DCAF11Q8TEB1 546 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms