RNA–Protein interactions for RNA: ENST00000251849.8

RAF1-201, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAF1, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-201ENST00000251849 FMN1Q68DA7 1419 aa19.33■□□□□ 0.68
RAF1-201ENST00000251849 PPM1GO15355 546 aaPredicted RBP19.32■□□□□ 0.68
RAF1-201ENST00000251849 SMG6Q86US8 1419 aaKnown RBP19.32■□□□□ 0.68
RAF1-201ENST00000251849 CRBNQ96SW2 442 aa19.31■□□□□ 0.68
RAF1-201ENST00000251849 ZNF777Q9ULD5 760 aaPredicted RBP19.3■□□□□ 0.68
RAF1-201ENST00000251849 TCERG1O14776 1098 aaKnown RBP19.3■□□□□ 0.68
RAF1-201ENST00000251849 PNISRQ8TF01 805 aaKnown RBP19.3■□□□□ 0.68
RAF1-201ENST00000251849 ARID4BQ4LE39 1312 aaPredicted RBP19.29■□□□□ 0.68
RAF1-201ENST00000251849 HFM1A2PYH4 1435 aa19.29■□□□□ 0.68
RAF1-201ENST00000251849 C20orf194Q5TEA3 1177 aa19.28■□□□□ 0.68
RAF1-201ENST00000251849 CC2D1BQ5T0F9 858 aaKnown RBP19.28■□□□□ 0.68
RAF1-201ENST00000251849 NCOA1Q15788 1441 aa19.26■□□□□ 0.67
RAF1-201ENST00000251849 CFTRP13569 1480 aa19.26■□□□□ 0.67
RAF1-201ENST00000251849 ZNF644Q9H582 1327 aaPredicted RBP19.26■□□□□ 0.67
RAF1-201ENST00000251849 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
RAF1-201ENST00000251849 PTPN23Q9H3S7 1636 aa19.24■□□□□ 0.67
RAF1-201ENST00000251849 KDM5BQ9UGL1 1544 aa19.24■□□□□ 0.67
RAF1-201ENST00000251849 SPRYD3Q8NCJ5 442 aa19.23■□□□□ 0.67
RAF1-201ENST00000251849 SLKQ9H2G2 1235 aaPredicted RBP19.23■□□□□ 0.67
RAF1-201ENST00000251849 DCAF11Q8TEB1 546 aa19.22■□□□□ 0.67
RAF1-201ENST00000251849 CARD11Q9BXL7 1154 aa19.21■□□□□ 0.67
RAF1-201ENST00000251849 USP35Q9P2H5 1018 aa19.19■□□□□ 0.66
RAF1-201ENST00000251849 NCOA2Q15596 1464 aa19.19■□□□□ 0.66
RAF1-201ENST00000251849 RAD54L2Q9Y4B4 1467 aa19.19■□□□□ 0.66
RAF1-201ENST00000251849 ST20-MTHFSA0A0A6YYL1 179 aa19.18■□□□□ 0.66
RAF1-201ENST00000251849 WASHC2CQ9Y4E1 1318 aa19.18■□□□□ 0.66
RAF1-201ENST00000251849 USP47Q96K76 1375 aa19.17■□□□□ 0.66
RAF1-201ENST00000251849 FGD5Q6ZNL6 1462 aa19.17■□□□□ 0.66
RAF1-201ENST00000251849 GZF1Q9H116 711 aaPredicted RBP19.16■□□□□ 0.66
RAF1-201ENST00000251849 PKNOX2Q96KN3 472 aa19.16■□□□□ 0.66
RAF1-201ENST00000251849 RNF123Q5XPI4 1314 aa19.15■□□□□ 0.66
RAF1-201ENST00000251849 KDM6BO15054 1643 aa19.15■□□□□ 0.66
RAF1-201ENST00000251849 DDRGK1Q96HY6 314 aa19.15■□□□□ 0.66
RAF1-201ENST00000251849 POGKQ9P215 609 aa19.15■□□□□ 0.66
RAF1-201ENST00000251849 RGL3Q3MIN7 710 aa19.14■□□□□ 0.65
RAF1-201ENST00000251849 MYOM3Q5VTT5 1437 aa19.14■□□□□ 0.65
RAF1-201ENST00000251849 PEG3Q9GZU2 1588 aa19.14■□□□□ 0.65
RAF1-201ENST00000251849 DHX29Q7Z478 1369 aaKnown RBP19.14■□□□□ 0.65
RAF1-201ENST00000251849 DENND4BO75064 1496 aaPredicted RBP19.13■□□□□ 0.65
RAF1-201ENST00000251849 CASKIN1Q8WXD9 1431 aa19.12■□□□□ 0.65
RAF1-201ENST00000251849 PKD2Q13563 968 aa19.11■□□□□ 0.65
RAF1-201ENST00000251849 MAP3K1Q13233 1512 aa19.11■□□□□ 0.65
RAF1-201ENST00000251849 TDRD9Q8NDG6 1382 aaKnown RBP19.09■□□□□ 0.65
RAF1-201ENST00000251849 NAP1L5Q96NT1 182 aaPredicted RBP19.09■□□□□ 0.65
RAF1-201ENST00000251849 VSIG10Q8N0Z9 540 aa19.07■□□□□ 0.64
RAF1-201ENST00000251849 FYCO1Q9BQS8 1478 aa19.07■□□□□ 0.64
RAF1-201ENST00000251849 NESP48681 1621 aa19.06■□□□□ 0.64
RAF1-201ENST00000251849 MS4A1P11836 297 aa19.05■□□□□ 0.64
RAF1-201ENST00000251849 CFAP43Q8NDM7 1665 aa19.04■□□□□ 0.64
RAF1-201ENST00000251849 MYBBP1AQ9BQG0 1328 aaKnown RBP19.03■□□□□ 0.64
RAF1-201ENST00000251849 ANKRD30BQ9BXX2 1392 aa19.02■□□□□ 0.64
RAF1-201ENST00000251849 CCDC146Q8IYE0 955 aa19.02■□□□□ 0.63
RAF1-201ENST00000251849 RRAGDQ9NQL2 400 aaPredicted RBP19.02■□□□□ 0.63
RAF1-201ENST00000251849 NCAPD3P42695 1498 aa19■□□□□ 0.63
RAF1-201ENST00000251849 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19■□□□□ 0.633e-7■■■■□ 22
RAF1-201ENST00000251849 FBLN2P98095 1184 aa19■□□□□ 0.63
RAF1-201ENST00000251849 FAM161AQ3B820 660 aa18.98■□□□□ 0.63
RAF1-201ENST00000251849 SEC24BO95487 1268 aa18.97■□□□□ 0.63
RAF1-201ENST00000251849 SPATA31E1Q6ZUB1 1445 aa18.97■□□□□ 0.63
RAF1-201ENST00000251849 CADPSQ9ULU8 1353 aa18.97■□□□□ 0.63
RAF1-201ENST00000251849 C8orf34Q49A92 452 aa18.96■□□□□ 0.63
RAF1-201ENST00000251849 KIF15Q9NS87 1388 aa18.95■□□□□ 0.62
RAF1-201ENST00000251849 NLRP13Q86W25 1043 aa18.95■□□□□ 0.62
RAF1-201ENST00000251849 PANK2Q9BZ23 570 aa18.94■□□□□ 0.62
RAF1-201ENST00000251849 RSPH6AQ9H0K4 717 aa18.94■□□□□ 0.62
RAF1-201ENST00000251849 ADAMTS8Q9UP79 889 aa18.94■□□□□ 0.62
RAF1-201ENST00000251849 NBPF1Q3BBV0 1214 aa18.94■□□□□ 0.62
RAF1-201ENST00000251849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.93■□□□□ 0.623e-6■□□□□ 11.3
RAF1-201ENST00000251849 PLEKHG5O94827 1062 aa18.93■□□□□ 0.62
RAF1-201ENST00000251849 NEUROD2Q15784 382 aa18.93■□□□□ 0.62
RAF1-201ENST00000251849 CANXP27824 592 aaKnown RBP18.92■□□□□ 0.62
RAF1-201ENST00000251849 RPRD2Q5VT52 1461 aaKnown RBP18.92■□□□□ 0.62
RAF1-201ENST00000251849 BCAR3O75815 825 aa18.91■□□□□ 0.62
RAF1-201ENST00000251849 ARID3AQ99856 593 aa18.91■□□□□ 0.62
RAF1-201ENST00000251849 PANK3Q9H999 370 aa18.9■□□□□ 0.62
RAF1-201ENST00000251849 CDK13Q14004 1512 aaKnown RBP18.9■□□□□ 0.62
RAF1-201ENST00000251849 RALBP1Q15311 655 aa18.9■□□□□ 0.62
RAF1-201ENST00000251849 FAM43AQ8N2R8 423 aa18.9■□□□□ 0.62
RAF1-201ENST00000251849 BCORL1Q5H9F3 1711 aa18.9■□□□□ 0.62
RAF1-201ENST00000251849 KTN1Q86UP2 1357 aaKnown RBP18.9■□□□□ 0.62
RAF1-201ENST00000251849 MAGI3Q5TCQ9 1506 aa18.89■□□□□ 0.61
RAF1-201ENST00000251849 SNAPC4Q5SXM2 1469 aa18.89■□□□□ 0.61
RAF1-201ENST00000251849 TEX14Q8IWB6 1497 aa18.89■□□□□ 0.61
RAF1-201ENST00000251849 ZMYND15Q9H091 742 aa18.88■□□□□ 0.61
RAF1-201ENST00000251849 CFDP1Q9UEE9 299 aaPredicted RBP18.88■□□□□ 0.61
RAF1-201ENST00000251849 WDR43Q15061 677 aaKnown RBP eCLIP18.88■□□□□ 0.61
RAF1-201ENST00000251849 BRD4O60885 1362 aaPredicted RBP18.86■□□□□ 0.61
RAF1-201ENST00000251849 ROCK2O75116 1388 aaKnown RBP18.86■□□□□ 0.61
RAF1-201ENST00000251849 CENPQQ7L2Z9 268 aaPredicted RBP18.86■□□□□ 0.61
RAF1-201ENST00000251849 BCL2L13Q9BXK5 485 aa18.85■□□□□ 0.61
RAF1-201ENST00000251849 PNNQ9H307 717 aaKnown RBP18.85■□□□□ 0.61
RAF1-201ENST00000251849 IGHDP01880 384 aa18.84■□□□□ 0.61
RAF1-201ENST00000251849 COG6Q9Y2V7 657 aa18.84■□□□□ 0.61
RAF1-201ENST00000251849 FANCD2Q9BXW9 1451 aa18.83■□□□□ 0.61
RAF1-201ENST00000251849 PANK1Q8TE04 598 aa18.83■□□□□ 0.61
RAF1-201ENST00000251849 LRPPRCP42704 1394 aaKnown RBP18.83■□□□□ 0.61
RAF1-201ENST00000251849 CLUAP1Q96AJ1 413 aa18.82■□□□□ 0.6
RAF1-201ENST00000251849 NUP155O75694 1391 aa18.82■□□□□ 0.6
RAF1-201ENST00000251849 PDE3BQ13370 1112 aa18.82■□□□□ 0.6
RAF1-201ENST00000251849 SUPT6HQ7KZ85 1726 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms