RNA–Protein interactions for RNA: ENST00000244546.4

PEX6-201, Transcript of peroxisomal biogenesis factor 6, humanhuman

TSL 1 (best) BASIC

Gene PEX6, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX6-201ENST00000244546 MAPKBP1O60336 1514 aa28.17■■■□□ 2.1
PEX6-201ENST00000244546 CARMIL2Q6F5E8 1435 aa28.14■■■□□ 2.1
PEX6-201ENST00000244546 MYT1LQ9UL68 1186 aa28.14■■■□□ 2.09
PEX6-201ENST00000244546 RAPGEF6Q8TEU7 1601 aa28.12■■■□□ 2.09
PEX6-201ENST00000244546 PTPN23Q9H3S7 1636 aa28.11■■■□□ 2.09
PEX6-201ENST00000244546 CCER2I3L3R5 266 aa28.11■■■□□ 2.09
PEX6-201ENST00000244546 ANP32CO43423 234 aa28.09■■■□□ 2.09
PEX6-201ENST00000244546 NBR1Q14596 966 aa28.04■■■□□ 2.08
PEX6-201ENST00000244546 CHD1O14646 1710 aa28.04■■■□□ 2.08
PEX6-201ENST00000244546 FOXD1Q16676 465 aa28.04■■■□□ 2.08
PEX6-201ENST00000244546 ARHGEF11O15085 1522 aa28.03■■■□□ 2.08
PEX6-201ENST00000244546 CFDP1Q9UEE9 299 aaPredicted RBP28.03■■■□□ 2.08
PEX6-201ENST00000244546 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.02■■■□□ 2.08
PEX6-201ENST00000244546 NAIPQ13075 1403 aa28.01■■■□□ 2.08
PEX6-201ENST00000244546 PTPRGP23470 1445 aa28■■■□□ 2.07
PEX6-201ENST00000244546 PLEKHD1A6NEE1 506 aa28■■■□□ 2.07
PEX6-201ENST00000244546 HFM1A2PYH4 1435 aa27.97■■■□□ 2.07
PEX6-201ENST00000244546 ERCC6L2Q5T890 1561 aa27.97■■■□□ 2.07
PEX6-201ENST00000244546 SALL2Q9Y467 1007 aaPredicted RBP27.95■■■□□ 2.07
PEX6-201ENST00000244546 KIF14Q15058 1648 aa27.94■■■□□ 2.06
PEX6-201ENST00000244546 HNRNPUQ00839 825 aaKnown RBP eCLIP27.94■■■□□ 2.06
PEX6-201ENST00000244546 TROQ12816 1431 aaPredicted RBP27.92■■■□□ 2.06
PEX6-201ENST00000244546 ATP10BO94823 1461 aa27.92■■■□□ 2.06
PEX6-201ENST00000244546 KDM6BO15054 1643 aa27.9■■■□□ 2.06
PEX6-201ENST00000244546 PAK3O75914 559 aaPredicted RBP27.89■■■□□ 2.06
PEX6-201ENST00000244546 NOP58Q9Y2X3 529 aaKnown RBP27.87■■■□□ 2.05
PEX6-201ENST00000244546 TCOF1Q13428 1488 aaKnown RBP27.85■■■□□ 2.05
PEX6-201ENST00000244546 MIA2Q96PC5 1412 aa27.85■■■□□ 2.05
PEX6-201ENST00000244546 ABCC5O15440 1437 aa27.84■■■□□ 2.05
PEX6-201ENST00000244546 DAPK1P53355 1430 aa27.83■■■□□ 2.05
PEX6-201ENST00000244546 PPP4R2Q9NY27 417 aa27.82■■■□□ 2.04
PEX6-201ENST00000244546 GPATCH8Q9UKJ3 1502 aaKnown RBP27.82■■■□□ 2.04
PEX6-201ENST00000244546 HNRNPMP52272 730 aaKnown RBP eCLIP27.82■■■□□ 2.047e-7■□□□□ 9.9
PEX6-201ENST00000244546 CCDC136Q96JN2 1154 aa27.82■■■□□ 2.04
PEX6-201ENST00000244546 B4GALNT3Q6L9W6 998 aa27.81■■■□□ 2.04
PEX6-201ENST00000244546 UACAQ9BZF9 1416 aa27.81■■■□□ 2.04
PEX6-201ENST00000244546 ABCA8O94911 1581 aa27.8■■■□□ 2.04
PEX6-201ENST00000244546 MPHOSPH9Q99550 1183 aa27.77■■■□□ 2.04
PEX6-201ENST00000244546 CAMSAP2Q08AD1 1489 aa27.76■■■□□ 2.03
PEX6-201ENST00000244546 TONSLQ96HA7 1378 aa27.75■■■□□ 2.03
PEX6-201ENST00000244546 IL27Q8NEV9 243 aa27.74■■■□□ 2.03
PEX6-201ENST00000244546 ERICH6BQ5W0A0 696 aa27.72■■■□□ 2.03
PEX6-201ENST00000244546 RTN4Q9NQC3 1192 aaKnown RBP27.72■■■□□ 2.03
PEX6-201ENST00000244546 SLC4A1APQ9BWU0 796 aaKnown RBP27.69■■■□□ 2.02
PEX6-201ENST00000244546 DENND4BO75064 1496 aaPredicted RBP27.67■■■□□ 2.02
PEX6-201ENST00000244546 TIMELESSQ9UNS1 1208 aa27.65■■■□□ 2.02
PEX6-201ENST00000244546 DNMT1P26358 1616 aaKnown RBP27.63■■■□□ 2.01
PEX6-201ENST00000244546 RTL5Q5HYW3 569 aaPredicted RBP27.61■■■□□ 2.01
PEX6-201ENST00000244546 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.61■■■□□ 2.01
PEX6-201ENST00000244546 ABCC10Q5T3U5 1492 aa27.61■■■□□ 2.01
PEX6-201ENST00000244546 AKNAQ7Z591 1439 aa27.6■■■□□ 2.01
PEX6-201ENST00000244546 TSPY4P0CV99 314 aa27.59■■■□□ 2.01
PEX6-201ENST00000244546 TSPY10P0CW01 314 aa27.59■■■□□ 2.01
PEX6-201ENST00000244546 NCOA1Q15788 1441 aa27.58■■■□□ 2.01
PEX6-201ENST00000244546 CDC42BPAQ5VT25 1732 aa27.57■■■□□ 2
PEX6-201ENST00000244546 GCC2Q8IWJ2 1684 aa27.57■■■□□ 2
PEX6-201ENST00000244546 SHROOM2Q13796 1616 aa27.57■■■□□ 2
PEX6-201ENST00000244546 L3MBTL2Q969R5 705 aa27.54■■■□□ 2
PEX6-201ENST00000244546 CCDC184Q52MB2 194 aa27.53■■■□□ 2
PEX6-201ENST00000244546 ROCK1Q13464 1354 aa27.53■■■□□ 2
PEX6-201ENST00000244546 ITSN2Q9NZM3 1697 aa27.53■■■□□ 2
PEX6-201ENST00000244546 ADCY10Q96PN6 1610 aa27.52■■■□□ 2
PEX6-201ENST00000244546 IPO9Q96P70 1041 aaKnown RBP27.51■■□□□ 1.99
PEX6-201ENST00000244546 CLASP1Q7Z460 1538 aa27.5■■□□□ 1.99
PEX6-201ENST00000244546 PKD2Q13563 968 aa27.5■■□□□ 1.99
PEX6-201ENST00000244546 ZNF326Q5BKZ1 582 aaKnown RBP27.5■■□□□ 1.99
PEX6-201ENST00000244546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.49■■□□□ 1.991e-7■□□□□ 9.9
PEX6-201ENST00000244546 ANKRD30AQ9BXX3 1397 aa27.49■■□□□ 1.99
PEX6-201ENST00000244546 C9orf84Q5VXU9 1444 aa27.49■■□□□ 1.99
PEX6-201ENST00000244546 ANP32AP39687 249 aaKnown RBP27.48■■□□□ 1.99
PEX6-201ENST00000244546 ABCC2Q92887 1545 aa27.47■■□□□ 1.99
PEX6-201ENST00000244546 TTC37Q6PGP7 1564 aa27.47■■□□□ 1.99
PEX6-201ENST00000244546 ZBTB47Q9UFB7 747 aaPredicted RBP27.46■■□□□ 1.99
PEX6-201ENST00000244546 ANKRD50Q9ULJ7 1429 aa27.45■■□□□ 1.99
PEX6-201ENST00000244546 ARHGAP5Q13017 1502 aa27.45■■□□□ 1.98
PEX6-201ENST00000244546 FAM9BQ8IZU0 186 aa27.44■■□□□ 1.98
PEX6-201ENST00000244546 NUP155O75694 1391 aa27.43■■□□□ 1.98
PEX6-201ENST00000244546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.42■■□□□ 1.988e-10■■■■□ 20.7
PEX6-201ENST00000244546 KIF15Q9NS87 1388 aa27.42■■□□□ 1.98
PEX6-201ENST00000244546 OSCARQ8IYS5 282 aa27.41■■□□□ 1.98
PEX6-201ENST00000244546 CDC42BPBQ9Y5S2 1711 aa27.4■■□□□ 1.98
PEX6-201ENST00000244546 ANKRD30BQ9BXX2 1392 aa27.4■■□□□ 1.98
PEX6-201ENST00000244546 SAMD9LQ8IVG5 1584 aa27.39■■□□□ 1.97
PEX6-201ENST00000244546 SYCP2Q9BX26 1530 aa27.38■■□□□ 1.97
PEX6-201ENST00000244546 HSPA5P11021 654 aaKnown RBP27.38■■□□□ 1.97
PEX6-201ENST00000244546 MBD5Q9P267 1494 aa27.38■■□□□ 1.97
PEX6-201ENST00000244546 PZPP20742 1482 aa27.37■■□□□ 1.97
PEX6-201ENST00000244546 NBPF8Q3BBV2 869 aa27.37■■□□□ 1.97
PEX6-201ENST00000244546 WASHC2AQ641Q2 1341 aa27.37■■□□□ 1.97
PEX6-201ENST00000244546 KDM5BQ9UGL1 1544 aa27.36■■□□□ 1.97
PEX6-201ENST00000244546 AFAP1Q8N556 730 aa27.35■■□□□ 1.97
PEX6-201ENST00000244546 ZCCHC11Q5TAX3 1644 aaKnown RBP27.35■■□□□ 1.97
PEX6-201ENST00000244546 UBE2Q2Q8WVN8 375 aa27.34■■□□□ 1.97
PEX6-201ENST00000244546 CROCC2H7BZ55 1655 aa27.31■■□□□ 1.96
PEX6-201ENST00000244546 KDM2AQ9Y2K7 1162 aa27.31■■□□□ 1.96
PEX6-201ENST00000244546 ZBED9Q6R2W3 1325 aa27.3■■□□□ 1.96
PEX6-201ENST00000244546 ADGRL2O95490 1459 aa27.29■■□□□ 1.96
PEX6-201ENST00000244546 ADGBQ8N7X0 1667 aa27.28■■□□□ 1.96
PEX6-201ENST00000244546 PREX2Q70Z35 1606 aa27.28■■□□□ 1.96
PEX6-201ENST00000244546 CCDC141Q6ZP82 1450 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms