RNA–Protein interactions for RNA: ENST00000235453.8

DENND1B-201, Transcript of DENN domain containing 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DENND1B, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1B-201ENST00000235453 AQRO60306 1485 aaKnown RBP eCLIP13.38□□□□□ -0.27
DENND1B-201ENST00000235453 CCNB3Q8WWL7 1395 aa13.37□□□□□ -0.27
DENND1B-201ENST00000235453 LAS1LQ9Y4W2 734 aaKnown RBP13.37□□□□□ -0.27
DENND1B-201ENST00000235453 RAB3GAP2Q9H2M9 1393 aa13.36□□□□□ -0.27
DENND1B-201ENST00000235453 NFKBIBQ15653 356 aa13.36□□□□□ -0.27
DENND1B-201ENST00000235453 MRC2Q9UBG0 1479 aa13.35□□□□□ -0.27
DENND1B-201ENST00000235453 HSP90AA1P07900 732 aaKnown RBP13.35□□□□□ -0.27
DENND1B-201ENST00000235453 PBRM1Q86U86 1689 aa13.35□□□□□ -0.27
DENND1B-201ENST00000235453 RBM10P98175 930 aaKnown RBP13.34□□□□□ -0.27
DENND1B-201ENST00000235453 LRRC9Q6ZRR7 1453 aa13.34□□□□□ -0.27
DENND1B-201ENST00000235453 CALD1Q05682 793 aaKnown RBP13.33□□□□□ -0.28
DENND1B-201ENST00000235453 FHAD1B1AJZ9 1412 aa13.33□□□□□ -0.28
DENND1B-201ENST00000235453 ZNF608Q9ULD9 1512 aaPredicted RBP13.33□□□□□ -0.28
DENND1B-201ENST00000235453 BACH2Q9BYV9 841 aa13.32□□□□□ -0.28
DENND1B-201ENST00000235453 CFAP43Q8NDM7 1665 aa13.32□□□□□ -0.28
DENND1B-201ENST00000235453 PHLDB1Q86UU1 1377 aa13.32□□□□□ -0.28
DENND1B-201ENST00000235453 SETD5Q9C0A6 1442 aa13.32□□□□□ -0.28
DENND1B-201ENST00000235453 NCOA2Q15596 1464 aa13.32□□□□□ -0.28
DENND1B-201ENST00000235453 EFCAB5A4FU69 1503 aa13.32□□□□□ -0.28
DENND1B-201ENST00000235453 PDE4CQ08493 712 aa13.31□□□□□ -0.28
DENND1B-201ENST00000235453 LRRIQ1Q96JM4 1722 aa13.3□□□□□ -0.28
DENND1B-201ENST00000235453 DCAF11Q8TEB1 546 aa13.3□□□□□ -0.28
DENND1B-201ENST00000235453 MAP3K1Q13233 1512 aa13.3□□□□□ -0.28
DENND1B-201ENST00000235453 CLCN1P35523 988 aa13.3□□□□□ -0.28
DENND1B-201ENST00000235453 RRAGDQ9NQL2 400 aaPredicted RBP13.3□□□□□ -0.28
DENND1B-201ENST00000235453 PDE4AP27815 886 aa13.29□□□□□ -0.28
DENND1B-201ENST00000235453 SAMD9Q5K651 1589 aa13.28□□□□□ -0.28
DENND1B-201ENST00000235453 CASKIN1Q8WXD9 1431 aa13.28□□□□□ -0.28
DENND1B-201ENST00000235453 TAOK2Q9UL54 1235 aa13.28□□□□□ -0.28
DENND1B-201ENST00000235453 FYCO1Q9BQS8 1478 aa13.28□□□□□ -0.28
DENND1B-201ENST00000235453 SNAPC4Q5SXM2 1469 aa13.27□□□□□ -0.28
DENND1B-201ENST00000235453 PRDM4Q9UKN5 801 aa13.27□□□□□ -0.29
DENND1B-201ENST00000235453 FAM50AQ14320 339 aaKnown RBP13.26□□□□□ -0.29
DENND1B-201ENST00000235453 L1TD1Q5T7N2 865 aaKnown RBP13.26□□□□□ -0.29
DENND1B-201ENST00000235453 PHF23Q9BUL5 403 aaPredicted RBP13.26□□□□□ -0.29
DENND1B-201ENST00000235453 ADAMTS12P58397 1594 aa13.26□□□□□ -0.29
DENND1B-201ENST00000235453 WDR62O43379 1518 aa13.25□□□□□ -0.29
DENND1B-201ENST00000235453 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
DENND1B-201ENST00000235453 PDCL3Q9H2J4 239 aa13.25□□□□□ -0.29
DENND1B-201ENST00000235453 PNNQ9H307 717 aaKnown RBP13.24□□□□□ -0.29
DENND1B-201ENST00000235453 NUDCQ9Y266 331 aa13.24□□□□□ -0.29
DENND1B-201ENST00000235453 FMN1Q68DA7 1419 aa13.23□□□□□ -0.29
DENND1B-201ENST00000235453 CNTLNQ9NXG0 1405 aa13.23□□□□□ -0.29
DENND1B-201ENST00000235453 GRIN2BQ13224 1484 aa13.23□□□□□ -0.29
DENND1B-201ENST00000235453 ARID3CA6NKF2 412 aa13.21□□□□□ -0.29
DENND1B-201ENST00000235453 IFT140Q96RY7 1462 aa13.21□□□□□ -0.29
DENND1B-201ENST00000235453 PDIA4P13667 645 aaKnown RBP13.21□□□□□ -0.3
DENND1B-201ENST00000235453 TPM2P07951 284 aa13.2□□□□□ -0.3
DENND1B-201ENST00000235453 KCNA4P22459 653 aa13.2□□□□□ -0.3
DENND1B-201ENST00000235453 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
DENND1B-201ENST00000235453 IQGAP2Q13576 1575 aa13.2□□□□□ -0.3
DENND1B-201ENST00000235453 NAP1L5Q96NT1 182 aaPredicted RBP13.2□□□□□ -0.3
DENND1B-201ENST00000235453 AKNAQ7Z591 1439 aa13.19□□□□□ -0.3
DENND1B-201ENST00000235453 THOC2Q8NI27 1593 aaKnown RBP13.19□□□□□ -0.3
DENND1B-201ENST00000235453 NPM2Q86SE8 214 aaKnown RBP13.18□□□□□ -0.3
DENND1B-201ENST00000235453 SIN3AQ96ST3 1273 aa13.18□□□□□ -0.3
DENND1B-201ENST00000235453 MTUS2Q5JR59 1369 aa13.17□□□□□ -0.3
DENND1B-201ENST00000235453 A0A0U1RQG5 324 aaPredicted RBP13.17□□□□□ -0.3
DENND1B-201ENST00000235453 MAGI3Q5TCQ9 1506 aa13.16□□□□□ -0.3
DENND1B-201ENST00000235453 PRKRIP1Q9H875 184 aaPredicted RBP13.15□□□□□ -0.3
DENND1B-201ENST00000235453 KDM5BQ9UGL1 1544 aa13.14□□□□□ -0.31
DENND1B-201ENST00000235453 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
DENND1B-201ENST00000235453 CDK13Q14004 1512 aaKnown RBP13.13□□□□□ -0.31
DENND1B-201ENST00000235453 FBLN2P98095 1184 aa13.12□□□□□ -0.31
DENND1B-201ENST00000235453 MAP7D2Q96T17 732 aa13.12□□□□□ -0.31
DENND1B-201ENST00000235453 TONSLQ96HA7 1378 aa13.12□□□□□ -0.31
DENND1B-201ENST00000235453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.12□□□□□ -0.31
DENND1B-201ENST00000235453 POLR1AO95602 1720 aaPredicted RBP13.12□□□□□ -0.31
DENND1B-201ENST00000235453 GRIN2AQ12879 1464 aa13.11□□□□□ -0.31
DENND1B-201ENST00000235453 FRAT2O75474 233 aaPredicted RBP13.11□□□□□ -0.31
DENND1B-201ENST00000235453 CCDC184Q52MB2 194 aa13.11□□□□□ -0.31
DENND1B-201ENST00000235453 HIRIP3Q9BW71 556 aaPredicted RBP13.11□□□□□ -0.31
DENND1B-201ENST00000235453 PTPRKQ15262 1439 aa13.1□□□□□ -0.31
DENND1B-201ENST00000235453 MRS2Q9HD23 443 aa13.1□□□□□ -0.31
DENND1B-201ENST00000235453 TERF1P54274 439 aa13.09□□□□□ -0.31
DENND1B-201ENST00000235453 DISP1Q96F81 1524 aa13.09□□□□□ -0.31
DENND1B-201ENST00000235453 UGGT2Q9NYU1 1516 aa13.09□□□□□ -0.31
DENND1B-201ENST00000235453 SUPT6HQ7KZ85 1726 aaKnown RBP13.09□□□□□ -0.31
DENND1B-201ENST00000235453 FSD2A1L4K1 749 aa13.08□□□□□ -0.31
DENND1B-201ENST00000235453 TAF7LQ5H9L4 462 aa13.08□□□□□ -0.31
DENND1B-201ENST00000235453 NCOA1Q15788 1441 aa13.08□□□□□ -0.32
DENND1B-201ENST00000235453 EPRSP07814 1512 aaKnown RBP13.08□□□□□ -0.32
DENND1B-201ENST00000235453 SMAP1Q8IYB5 467 aaPredicted RBP13.08□□□□□ -0.32
DENND1B-201ENST00000235453 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
DENND1B-201ENST00000235453 HECW1Q76N89 1606 aa13.08□□□□□ -0.32
DENND1B-201ENST00000235453 CHMP7Q8WUX9 453 aaPredicted RBP13.07□□□□□ -0.32
DENND1B-201ENST00000235453 EHBP1L1Q8N3D4 1523 aa13.07□□□□□ -0.32
DENND1B-201ENST00000235453 KIAA0586Q9BVV6 1533 aa13.07□□□□□ -0.32
DENND1B-201ENST00000235453 CEP170Q5SW79 1584 aa13.07□□□□□ -0.32
DENND1B-201ENST00000235453 KIAA0556O60303 1618 aa13.07□□□□□ -0.32
DENND1B-201ENST00000235453 NCLP19338 710 aaKnown RBP13.06□□□□□ -0.32
DENND1B-201ENST00000235453 FAM9BQ8IZU0 186 aa13.06□□□□□ -0.32
DENND1B-201ENST00000235453 MYOM3Q5VTT5 1437 aa13.06□□□□□ -0.32
DENND1B-201ENST00000235453 BCL11BQ9C0K0 894 aaPredicted RBP13.05□□□□□ -0.32
DENND1B-201ENST00000235453 ISY1Q9ULR0 285 aaKnown RBP13.04□□□□□ -0.32
DENND1B-201ENST00000235453 CCDC18Q5T9S5 1454 aa13.04□□□□□ -0.32
DENND1B-201ENST00000235453 RRP1P56182 461 aaKnown RBP13.04□□□□□ -0.32
DENND1B-201ENST00000235453 PTPN23Q9H3S7 1636 aa13.03□□□□□ -0.32
DENND1B-201ENST00000235453 UTP14CQ5TAP6 766 aaKnown RBP13.03□□□□□ -0.32
DENND1B-201ENST00000235453 CCDC7Q96M83 1385 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms