RNA–Protein interactions for RNA: ENST00000226091.2

EFNB3-201, Transcript of ephrin B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB3, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3-201ENST00000226091 RGL3Q3MIN7 710 aa22.9■■□□□ 1.26
EFNB3-201ENST00000226091 THOC2Q8NI27 1593 aaKnown RBP22.9■■□□□ 1.26
EFNB3-201ENST00000226091 PKD2Q13563 968 aa22.9■■□□□ 1.26
EFNB3-201ENST00000226091 JPH4Q96JJ6 628 aa22.89■■□□□ 1.26
EFNB3-201ENST00000226091 SUPT6HQ7KZ85 1726 aaKnown RBP22.89■■□□□ 1.25
EFNB3-201ENST00000226091 HNRNPMP52272 730 aaKnown RBP eCLIP22.88■■□□□ 1.25
EFNB3-201ENST00000226091 KDM6BO15054 1643 aa22.88■■□□□ 1.25
EFNB3-201ENST00000226091 EHBP1L1Q8N3D4 1523 aa22.87■■□□□ 1.25
EFNB3-201ENST00000226091 KDM5BQ9UGL1 1544 aa22.86■■□□□ 1.25
EFNB3-201ENST00000226091 UGGT2Q9NYU1 1516 aa22.85■■□□□ 1.25
EFNB3-201ENST00000226091 PLEKHD1A6NEE1 506 aa22.84■■□□□ 1.25
EFNB3-201ENST00000226091 PLB1Q6P1J6 1458 aa22.83■■□□□ 1.25
EFNB3-201ENST00000226091 IQGAP2Q13576 1575 aa22.82■■□□□ 1.24
EFNB3-201ENST00000226091 DENND4BO75064 1496 aaPredicted RBP22.81■■□□□ 1.24
EFNB3-201ENST00000226091 MRC2Q9UBG0 1479 aa22.79■■□□□ 1.24
EFNB3-201ENST00000226091 ARHGEF11O15085 1522 aa22.79■■□□□ 1.24
EFNB3-201ENST00000226091 TARBP1Q13395 1621 aaKnown RBP22.77■■□□□ 1.24
EFNB3-201ENST00000226091 TSPY4P0CV99 314 aa22.76■■□□□ 1.23
EFNB3-201ENST00000226091 TSPY10P0CW01 314 aa22.76■■□□□ 1.23
EFNB3-201ENST00000226091 DCAF11Q8TEB1 546 aa22.75■■□□□ 1.23
EFNB3-201ENST00000226091 MYT1LQ9UL68 1186 aa22.75■■□□□ 1.23
EFNB3-201ENST00000226091 PRKRIP1Q9H875 184 aaPredicted RBP22.72■■□□□ 1.23
EFNB3-201ENST00000226091 TCOF1Q13428 1488 aaKnown RBP22.72■■□□□ 1.23
EFNB3-201ENST00000226091 B4GALNT3Q6L9W6 998 aa22.72■■□□□ 1.23
EFNB3-201ENST00000226091 ABCC5O15440 1437 aa22.72■■□□□ 1.23
EFNB3-201ENST00000226091 KIF7Q2M1P5 1343 aa22.72■■□□□ 1.23
EFNB3-201ENST00000226091 DAPK1P53355 1430 aa22.71■■□□□ 1.23
EFNB3-201ENST00000226091 NUP155O75694 1391 aa22.71■■□□□ 1.23
EFNB3-201ENST00000226091 CARD11Q9BXL7 1154 aa22.7■■□□□ 1.22
EFNB3-201ENST00000226091 RBM19Q9Y4C8 960 aaKnown RBP22.7■■□□□ 1.22
EFNB3-201ENST00000226091 HECW1Q76N89 1606 aa22.69■■□□□ 1.22
EFNB3-201ENST00000226091 SENP3Q9H4L4 574 aaPredicted RBP22.69■■□□□ 1.22
EFNB3-201ENST00000226091 PRKCSHP14314 528 aaPredicted RBP22.68■■□□□ 1.22
EFNB3-201ENST00000226091 NUP153P49790 1475 aaKnown RBP22.68■■□□□ 1.22
EFNB3-201ENST00000226091 GCC2Q8IWJ2 1684 aa22.66■■□□□ 1.22
EFNB3-201ENST00000226091 PBRM1Q86U86 1689 aa22.65■■□□□ 1.22
EFNB3-201ENST00000226091 CCDC7Q96M83 1385 aa22.64■■□□□ 1.22
EFNB3-201ENST00000226091 ANKRD30BQ9BXX2 1392 aa22.64■■□□□ 1.21
EFNB3-201ENST00000226091 DISP1Q96F81 1524 aa22.64■■□□□ 1.21
EFNB3-201ENST00000226091 ADAMTS12P58397 1594 aa22.63■■□□□ 1.21
EFNB3-201ENST00000226091 MIA2Q96PC5 1412 aa22.62■■□□□ 1.21
EFNB3-201ENST00000226091 GRIN2AQ12879 1464 aa22.62■■□□□ 1.21
EFNB3-201ENST00000226091 ST20-MTHFSA0A0A6YYL1 179 aa22.62■■□□□ 1.21
EFNB3-201ENST00000226091 KIAA0586Q9BVV6 1533 aa22.62■■□□□ 1.21
EFNB3-201ENST00000226091 WDR62O43379 1518 aa22.61■■□□□ 1.21
EFNB3-201ENST00000226091 AKNAQ7Z591 1439 aa22.61■■□□□ 1.21
EFNB3-201ENST00000226091 IFT140Q96RY7 1462 aa22.61■■□□□ 1.21
EFNB3-201ENST00000226091 TMC1Q8TDI8 760 aa22.59■■□□□ 1.21
EFNB3-201ENST00000226091 CNTLNQ9NXG0 1405 aa22.58■■□□□ 1.21
EFNB3-201ENST00000226091 USP47Q96K76 1375 aa22.54■■□□□ 1.2
EFNB3-201ENST00000226091 NCOA1Q15788 1441 aa22.53■■□□□ 1.2
EFNB3-201ENST00000226091 CARMIL2Q6F5E8 1435 aa22.53■■□□□ 1.2
EFNB3-201ENST00000226091 ANKRD30AQ9BXX3 1397 aa22.53■■□□□ 1.2
EFNB3-201ENST00000226091 TROQ12816 1431 aaPredicted RBP22.52■■□□□ 1.2
EFNB3-201ENST00000226091 CAMSAP2Q08AD1 1489 aa22.52■■□□□ 1.2
EFNB3-201ENST00000226091 NBPF1Q3BBV0 1214 aa22.52■■□□□ 1.19
EFNB3-201ENST00000226091 CC2D1BQ5T0F9 858 aaKnown RBP22.52■■□□□ 1.19
EFNB3-201ENST00000226091 ANKRD50Q9ULJ7 1429 aa22.51■■□□□ 1.19
EFNB3-201ENST00000226091 RPRD2Q5VT52 1461 aaKnown RBP22.5■■□□□ 1.19
EFNB3-201ENST00000226091 ERICH6Q7L0X2 663 aa22.5■■□□□ 1.19
EFNB3-201ENST00000226091 KIAA0556O60303 1618 aa22.5■■□□□ 1.19
EFNB3-201ENST00000226091 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
EFNB3-201ENST00000226091 GPATCH8Q9UKJ3 1502 aaKnown RBP22.49■■□□□ 1.19
EFNB3-201ENST00000226091 KIF14Q15058 1648 aa22.48■■□□□ 1.19
EFNB3-201ENST00000226091 TEX14Q8IWB6 1497 aa22.48■■□□□ 1.19
EFNB3-201ENST00000226091 ROCK1Q13464 1354 aa22.48■■□□□ 1.19
EFNB3-201ENST00000226091 PTPRGP23470 1445 aa22.45■■□□□ 1.18
EFNB3-201ENST00000226091 RAPGEF6Q8TEU7 1601 aa22.44■■□□□ 1.18
EFNB3-201ENST00000226091 DNMT1P26358 1616 aaKnown RBP22.44■■□□□ 1.18
EFNB3-201ENST00000226091 KIF15Q9NS87 1388 aa22.44■■□□□ 1.18
EFNB3-201ENST00000226091 MSH5O43196 834 aa22.42■■□□□ 1.18
EFNB3-201ENST00000226091 SPATA31E1Q6ZUB1 1445 aa22.42■■□□□ 1.18
EFNB3-201ENST00000226091 CEP170Q5SW79 1584 aa22.4■■□□□ 1.18
EFNB3-201ENST00000226091 PZPP20742 1482 aa22.39■■□□□ 1.18
EFNB3-201ENST00000226091 ROCK2O75116 1388 aaKnown RBP22.39■■□□□ 1.18
EFNB3-201ENST00000226091 C9orf84Q5VXU9 1444 aa22.39■■□□□ 1.17
EFNB3-201ENST00000226091 SYNJ2O15056 1496 aa22.39■■□□□ 1.17
EFNB3-201ENST00000226091 KIAA1107Q9UPP5 1409 aa22.38■■□□□ 1.17
EFNB3-201ENST00000226091 ATP10BO94823 1461 aa22.37■■□□□ 1.17
EFNB3-201ENST00000226091 ZBED9Q6R2W3 1325 aa22.36■■□□□ 1.17
EFNB3-201ENST00000226091 PPP4R2Q9NY27 417 aa22.35■■□□□ 1.17
EFNB3-201ENST00000226091 CCDC136Q96JN2 1154 aa22.34■■□□□ 1.17
EFNB3-201ENST00000226091 AFAP1Q8N556 730 aa22.33■■□□□ 1.17
EFNB3-201ENST00000226091 CHGAP10645 457 aaKnown RBP22.32■■□□□ 1.16
EFNB3-201ENST00000226091 MAGI1Q96QZ7 1491 aaPredicted RBP22.31■■□□□ 1.16
EFNB3-201ENST00000226091 NPM2Q86SE8 214 aaKnown RBP22.28■■□□□ 1.16
EFNB3-201ENST00000226091 DHX29Q7Z478 1369 aaKnown RBP22.27■■□□□ 1.16
EFNB3-201ENST00000226091 PLIN1O60240 522 aa22.27■■□□□ 1.15
EFNB3-201ENST00000226091 ERICH6BQ5W0A0 696 aa22.27■■□□□ 1.15
EFNB3-201ENST00000226091 CDCA7LQ96GN5 454 aa22.26■■□□□ 1.15
EFNB3-201ENST00000226091 SKAP1Q86WV1 359 aa22.24■■□□□ 1.15
EFNB3-201ENST00000226091 BCORL1Q5H9F3 1711 aa22.24■■□□□ 1.15
EFNB3-201ENST00000226091 PNISRQ8TF01 805 aaKnown RBP22.23■■□□□ 1.15
EFNB3-201ENST00000226091 PANK3Q9H999 370 aa22.23■■□□□ 1.15
EFNB3-201ENST00000226091 MBD5Q9P267 1494 aa22.23■■□□□ 1.15
EFNB3-201ENST00000226091 FANCIQ9NVI1 1328 aa22.22■■□□□ 1.15
EFNB3-201ENST00000226091 CCDC144AA2RUR9 1427 aa22.21■■□□□ 1.15
EFNB3-201ENST00000226091 NUDCQ9Y266 331 aa22.2■■□□□ 1.14
EFNB3-201ENST00000226091 NBR1Q14596 966 aa22.19■■□□□ 1.14
EFNB3-201ENST00000226091 NUTM2DQ5VT03 806 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms