RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 ARHGAP5Q13017 1502 aa25.2■■□□□ 1.62
CHMP5-201ENST00000223500 ARAP3Q8WWN8 1544 aa25.2■■□□□ 1.62
CHMP5-201ENST00000223500 CD109Q6YHK3 1445 aa25.2■■□□□ 1.62
CHMP5-201ENST00000223500 FAM50AQ14320 339 aaKnown RBP25.2■■□□□ 1.62
CHMP5-201ENST00000223500 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.18■■□□□ 1.62
CHMP5-201ENST00000223500 EFCAB2Q5VUJ9 269 aa25.18■■□□□ 1.62
CHMP5-201ENST00000223500 ZNF777Q9ULD5 760 aaPredicted RBP25.17■■□□□ 1.62
CHMP5-201ENST00000223500 TCOF1Q13428 1488 aaKnown RBP25.17■■□□□ 1.62
CHMP5-201ENST00000223500 MAP3K4Q9Y6R4 1608 aa25.16■■□□□ 1.62
CHMP5-201ENST00000223500 KIF13AQ9H1H9 1805 aa25.14■■□□□ 1.62
CHMP5-201ENST00000223500 CAMSAP2Q08AD1 1489 aa25.13■■□□□ 1.61
CHMP5-201ENST00000223500 ZNF644Q9H582 1327 aaPredicted RBP25.1■■□□□ 1.61
CHMP5-201ENST00000223500 PCGF6Q9BYE7 350 aa25.1■■□□□ 1.61
CHMP5-201ENST00000223500 FANCAO15360 1455 aa25.1■■□□□ 1.61
CHMP5-201ENST00000223500 PLEKHH2Q8IVE3 1493 aa25.1■■□□□ 1.61
CHMP5-201ENST00000223500 CFAP74Q9C0B2 1584 aa25.09■■□□□ 1.61
CHMP5-201ENST00000223500 SAMD9LQ8IVG5 1584 aa25.08■■□□□ 1.61
CHMP5-201ENST00000223500 TSPOAP1O95153 1857 aa25.06■■□□□ 1.6
CHMP5-201ENST00000223500 TRHP20396 242 aaPredicted RBP25.04■■□□□ 1.6
CHMP5-201ENST00000223500 ITGAEP38570 1179 aa25.04■■□□□ 1.6
CHMP5-201ENST00000223500 KIAA1107Q9UPP5 1409 aa25.04■■□□□ 1.6
CHMP5-201ENST00000223500 NEO1Q92859 1461 aa25.03■■□□□ 1.6
CHMP5-201ENST00000223500 RSPH4AQ5TD94 716 aa25.02■■□□□ 1.6
CHMP5-201ENST00000223500 TEX14Q8IWB6 1497 aa25.02■■□□□ 1.6
CHMP5-201ENST00000223500 AKNAQ7Z591 1439 aa25.02■■□□□ 1.6
CHMP5-201ENST00000223500 ABCC1P33527 1531 aa25.01■■□□□ 1.59
CHMP5-201ENST00000223500 DNMT1P26358 1616 aaKnown RBP25■■□□□ 1.59
CHMP5-201ENST00000223500 HNRNPMP52272 730 aaKnown RBP eCLIP25■■□□□ 1.59
CHMP5-201ENST00000223500 ARHGEF5Q12774 1597 aa25■■□□□ 1.59
CHMP5-201ENST00000223500 SYCP2Q9BX26 1530 aa24.99■■□□□ 1.59
CHMP5-201ENST00000223500 ADGRL1O94910 1474 aa24.99■■□□□ 1.59
CHMP5-201ENST00000223500 PPRC1Q5VV67 1664 aaKnown RBP24.98■■□□□ 1.59
CHMP5-201ENST00000223500 DAPK1P53355 1430 aa24.97■■□□□ 1.59
CHMP5-201ENST00000223500 MBD5Q9P267 1494 aa24.97■■□□□ 1.59
CHMP5-201ENST00000223500 ABCC5O15440 1437 aa24.96■■□□□ 1.59
CHMP5-201ENST00000223500 SCAPERQ9BY12 1400 aa24.95■■□□□ 1.58
CHMP5-201ENST00000223500 CCDC141Q6ZP82 1450 aa24.95■■□□□ 1.58
CHMP5-201ENST00000223500 TSPY4P0CV99 314 aa24.95■■□□□ 1.58
CHMP5-201ENST00000223500 TSPY10P0CW01 314 aa24.95■■□□□ 1.58
CHMP5-201ENST00000223500 ARHGEF12Q9NZN5 1544 aa24.93■■□□□ 1.58
CHMP5-201ENST00000223500 CROCC2H7BZ55 1655 aa24.92■■□□□ 1.58
CHMP5-201ENST00000223500 SHANK2Q9UPX8 1470 aa24.9■■□□□ 1.58
CHMP5-201ENST00000223500 PTPRKQ15262 1439 aa24.9■■□□□ 1.58
CHMP5-201ENST00000223500 TRAPPC8Q9Y2L5 1435 aa24.88■■□□□ 1.57
CHMP5-201ENST00000223500 CHIC2Q9UKJ5 165 aa24.88■■□□□ 1.57
CHMP5-201ENST00000223500 DENND4BO75064 1496 aaPredicted RBP24.87■■□□□ 1.57
CHMP5-201ENST00000223500 C9orf84Q5VXU9 1444 aa24.87■■□□□ 1.57
CHMP5-201ENST00000223500 ADGBQ8N7X0 1667 aa24.85■■□□□ 1.57
CHMP5-201ENST00000223500 ZNF518AQ6AHZ1 1483 aa24.85■■□□□ 1.57
CHMP5-201ENST00000223500 AFAP1Q8N556 730 aa24.84■■□□□ 1.57
CHMP5-201ENST00000223500 POGZQ7Z3K3 1410 aa24.84■■□□□ 1.57
CHMP5-201ENST00000223500 ROCK1Q13464 1354 aa24.84■■□□□ 1.57
CHMP5-201ENST00000223500 MAST1Q9Y2H9 1570 aa24.83■■□□□ 1.57
CHMP5-201ENST00000223500 SPAG9O60271 1321 aaKnown RBP24.83■■□□□ 1.57
CHMP5-201ENST00000223500 ANKRD30AQ9BXX3 1397 aa24.82■■□□□ 1.56
CHMP5-201ENST00000223500 ADGRL2O95490 1459 aa24.81■■□□□ 1.56
CHMP5-201ENST00000223500 RICTORQ6R327 1708 aa24.79■■□□□ 1.56
CHMP5-201ENST00000223500 RTEL1-TNFRSF6BF6WH68 1400 aa24.79■■□□□ 1.56
CHMP5-201ENST00000223500 RRP7BPQ9NSQ0 103 aa24.78■■□□□ 1.56
CHMP5-201ENST00000223500 MYT1LQ9UL68 1186 aa24.78■■□□□ 1.56
CHMP5-201ENST00000223500 NCOA1Q15788 1441 aa24.78■■□□□ 1.56
CHMP5-201ENST00000223500 RAPGEF3O95398 923 aa24.77■■□□□ 1.56
CHMP5-201ENST00000223500 HFM1A2PYH4 1435 aa24.77■■□□□ 1.56
CHMP5-201ENST00000223500 KDM5CP41229 1560 aa24.77■■□□□ 1.56
CHMP5-201ENST00000223500 SETD5Q9C0A6 1442 aa24.75■■□□□ 1.55
CHMP5-201ENST00000223500 ATP7AQ04656 1500 aa24.74■■□□□ 1.55
CHMP5-201ENST00000223500 INO80Q9ULG1 1556 aaPredicted RBP24.74■■□□□ 1.55
CHMP5-201ENST00000223500 NAIPQ13075 1403 aa24.73■■□□□ 1.55
CHMP5-201ENST00000223500 GCC2Q8IWJ2 1684 aa24.73■■□□□ 1.55
CHMP5-201ENST00000223500 MLH3Q9UHC1 1453 aa24.73■■□□□ 1.55
CHMP5-201ENST00000223500 ZFYVE16Q7Z3T8 1539 aa24.73■■□□□ 1.55
CHMP5-201ENST00000223500 PLXNC1O60486 1568 aa24.73■■□□□ 1.55
CHMP5-201ENST00000223500 HECW2Q9P2P5 1572 aa24.72■■□□□ 1.55
CHMP5-201ENST00000223500 KIF15Q9NS87 1388 aa24.72■■□□□ 1.55
CHMP5-201ENST00000223500 FRMPD1Q5SYB0 1578 aa24.71■■□□□ 1.55
CHMP5-201ENST00000223500 KIDINS220Q9ULH0 1771 aa24.69■■□□□ 1.54
CHMP5-201ENST00000223500 ZMYM4Q5VZL5 1548 aa24.69■■□□□ 1.54
CHMP5-201ENST00000223500 COL17A1Q9UMD9 1497 aaPredicted RBP24.68■■□□□ 1.54
CHMP5-201ENST00000223500 MAGI2Q86UL8 1455 aa24.67■■□□□ 1.54
CHMP5-201ENST00000223500 RAB3GAP2Q9H2M9 1393 aa24.66■■□□□ 1.54
CHMP5-201ENST00000223500 HRCP23327 699 aa24.66■■□□□ 1.54
CHMP5-201ENST00000223500 KDM6BO15054 1643 aa24.66■■□□□ 1.54
CHMP5-201ENST00000223500 DUOX2Q9NRD8 1548 aa24.65■■□□□ 1.54
CHMP5-201ENST00000223500 ACIN1Q9UKV3 1341 aaKnown RBP24.65■■□□□ 1.54
CHMP5-201ENST00000223500 ANKRD50Q9ULJ7 1429 aa24.64■■□□□ 1.54
CHMP5-201ENST00000223500 ERBINQ96RT1 1412 aa24.59■■□□□ 1.53
CHMP5-201ENST00000223500 ABCA6Q8N139 1617 aa24.59■■□□□ 1.53
CHMP5-201ENST00000223500 A2MP01023 1474 aa24.58■■□□□ 1.52
CHMP5-201ENST00000223500 DHX29Q7Z478 1369 aaKnown RBP24.58■■□□□ 1.52
CHMP5-201ENST00000223500 DIP2CQ9Y2E4 1556 aa24.57■■□□□ 1.52
CHMP5-201ENST00000223500 YEATS2Q9ULM3 1422 aa24.56■■□□□ 1.52
CHMP5-201ENST00000223500 ATP10AO60312 1499 aa24.53■■□□□ 1.52
CHMP5-201ENST00000223500 ARHGEF40Q8TER5 1519 aa24.52■■□□□ 1.52
CHMP5-201ENST00000223500 TRIM52Q96A61 297 aa24.51■■□□□ 1.51
CHMP5-201ENST00000223500 EIF2AK4Q9P2K8 1649 aaKnown RBP24.51■■□□□ 1.51
CHMP5-201ENST00000223500 REREQ9P2R6 1566 aa24.48■■□□□ 1.51
CHMP5-201ENST00000223500 KIF3BO15066 747 aa24.47■■□□□ 1.51
CHMP5-201ENST00000223500 BCORL1Q5H9F3 1711 aa24.44■■□□□ 1.5
CHMP5-201ENST00000223500 UNC13BO14795 1591 aa24.44■■□□□ 1.5
CHMP5-201ENST00000223500 NUP155O75694 1391 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms