RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 NISCHQ9Y2I1 1504 aa38.65■■■■□ 3.78
CHMP5-201ENST00000223500 CCDC180Q9P1Z9 1646 aa34.03■■■■□ 3.04
CHMP5-201ENST00000223500 ABCC9O60706 1549 aa32.58■■■□□ 2.81
CHMP5-201ENST00000223500 ZCCHC6Q5VYS8 1495 aaKnown RBP32.34■■■□□ 2.77
CHMP5-201ENST00000223500 DCAF8L2P0C7V8 631 aa32.07■■■□□ 2.72
CHMP5-201ENST00000223500 DCAF1Q9Y4B6 1507 aa32.01■■■□□ 2.71
CHMP5-201ENST00000223500 MYO15BQ96JP2 1530 aa31.86■■■□□ 2.69
CHMP5-201ENST00000223500 NACADO15069 1562 aa31.83■■■□□ 2.69
CHMP5-201ENST00000223500 RB1CC1Q8TDY2 1594 aa31.69■■■□□ 2.66
CHMP5-201ENST00000223500 SCRIBQ14160 1630 aa31.12■■■□□ 2.57
CHMP5-201ENST00000223500 SHROOM4Q9ULL8 1493 aa31.02■■■□□ 2.56
CHMP5-201ENST00000223500 UNC13AQ9UPW8 1703 aa30.96■■■□□ 2.55
CHMP5-201ENST00000223500 BICRAQ9NZM4 1560 aa30.64■■■□□ 2.5
CHMP5-201ENST00000223500 PABPN1Q86U42 306 aaKnown RBP eCLIP30.58■■■□□ 2.49
CHMP5-201ENST00000223500 CECR2Q9BXF3 1484 aa30■■■□□ 2.39
CHMP5-201ENST00000223500 BAZ1AQ9NRL2 1556 aaPredicted RBP29.92■■■□□ 2.38
CHMP5-201ENST00000223500 SMARCA4P51532 1647 aa29.83■■■□□ 2.37
CHMP5-201ENST00000223500 EIF4G1Q04637 1599 aaKnown RBP29.8■■■□□ 2.36
CHMP5-201ENST00000223500 MROH2BQ7Z745 1585 aa29.78■■■□□ 2.36
CHMP5-201ENST00000223500 RSF1Q96T23 1441 aaPredicted RBP29.72■■■□□ 2.35
CHMP5-201ENST00000223500 SUPT5HO00267 1087 aaKnown RBP29.61■■■□□ 2.33
CHMP5-201ENST00000223500 WIZO95785 1651 aa29.52■■■□□ 2.32
CHMP5-201ENST00000223500 PEG3Q9GZU2 1588 aa29.51■■■□□ 2.31
CHMP5-201ENST00000223500 CC2D2AQ9P2K1 1620 aa29.5■■■□□ 2.31
CHMP5-201ENST00000223500 SMARCA2P51531 1590 aa29.5■■■□□ 2.31
CHMP5-201ENST00000223500 ATAD2BQ9ULI0 1458 aa29.47■■■□□ 2.31
CHMP5-201ENST00000223500 NCAPD3P42695 1498 aa29.34■■■□□ 2.29
CHMP5-201ENST00000223500 BAZ1BQ9UIG0 1483 aaKnown RBP29.3■■■□□ 2.28
CHMP5-201ENST00000223500 HMGXB3Q12766 1538 aa29.27■■■□□ 2.28
CHMP5-201ENST00000223500 TOP2AP11388 1531 aaKnown RBP29.25■■■□□ 2.27
CHMP5-201ENST00000223500 DNAJC5BQ9UF47 199 aa29.17■■■□□ 2.26
CHMP5-201ENST00000223500 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
CHMP5-201ENST00000223500 CADPSQ9ULU8 1353 aa28.55■■■□□ 2.16
CHMP5-201ENST00000223500 CFTRP13569 1480 aa28.52■■■□□ 2.16
CHMP5-201ENST00000223500 LAMC3Q9Y6N6 1575 aa28.47■■■□□ 2.15
CHMP5-201ENST00000223500 PRDM2Q13029 1718 aa28.41■■■□□ 2.14
CHMP5-201ENST00000223500 NESP48681 1621 aa28.39■■■□□ 2.14
CHMP5-201ENST00000223500 PDS5BQ9NTI5 1447 aa28.28■■■□□ 2.12
CHMP5-201ENST00000223500 FANCD2Q9BXW9 1451 aa28.21■■■□□ 2.11
CHMP5-201ENST00000223500 CEP164Q9UPV0 1460 aa28.12■■■□□ 2.09
CHMP5-201ENST00000223500 KIF21AQ7Z4S6 1674 aa28.1■■■□□ 2.09
CHMP5-201ENST00000223500 ABCC8Q09428 1581 aa28.07■■■□□ 2.08
CHMP5-201ENST00000223500 CHIC1Q5VXU3 224 aa28.06■■■□□ 2.08
CHMP5-201ENST00000223500 ERCC6Q03468 1493 aa28.06■■■□□ 2.08
CHMP5-201ENST00000223500 WRNQ14191 1432 aaPredicted RBP eCLIP28.04■■■□□ 2.08
CHMP5-201ENST00000223500 TRIM41Q8WV44 630 aa27.95■■■□□ 2.06
CHMP5-201ENST00000223500 MRC2Q9UBG0 1479 aa27.91■■■□□ 2.06
CHMP5-201ENST00000223500 CUX1P39880 1505 aa27.9■■■□□ 2.06
CHMP5-201ENST00000223500 SYNJ1O43426 1573 aa27.89■■■□□ 2.06
CHMP5-201ENST00000223500 DNMBPQ6XZF7 1577 aa27.89■■■□□ 2.05
CHMP5-201ENST00000223500 TOP2BQ02880 1626 aa27.88■■■□□ 2.05
CHMP5-201ENST00000223500 BIVM-ERCC5R4GMW8 1640 aa27.87■■■□□ 2.05
CHMP5-201ENST00000223500 URB2Q14146 1524 aaKnown RBP27.86■■■□□ 2.05
CHMP5-201ENST00000223500 TOPBP1Q92547 1522 aa27.85■■■□□ 2.05
CHMP5-201ENST00000223500 THOC2Q8NI27 1593 aaKnown RBP27.79■■■□□ 2.04
CHMP5-201ENST00000223500 WDR62O43379 1518 aa27.77■■■□□ 2.04
CHMP5-201ENST00000223500 FGD5Q6ZNL6 1462 aa27.71■■■□□ 2.03
CHMP5-201ENST00000223500 POLA1P09884 1462 aaPredicted RBP27.65■■■□□ 2.02
CHMP5-201ENST00000223500 SOGA1O94964 1423 aa27.59■■■□□ 2.01
CHMP5-201ENST00000223500 RAD54L2Q9Y4B4 1467 aa27.53■■■□□ 2
CHMP5-201ENST00000223500 CUX2O14529 1486 aa27.51■■□□□ 1.99
CHMP5-201ENST00000223500 IFT140Q96RY7 1462 aa27.5■■□□□ 1.99
CHMP5-201ENST00000223500 ABCA10Q8WWZ4 1543 aa27.47■■□□□ 1.99
CHMP5-201ENST00000223500 TARBP1Q13395 1621 aaKnown RBP27.46■■□□□ 1.99
CHMP5-201ENST00000223500 WDR97A6NE52 1622 aa27.42■■□□□ 1.98
CHMP5-201ENST00000223500 EEA1Q15075 1411 aa27.41■■□□□ 1.98
CHMP5-201ENST00000223500 KIF27Q86VH2 1401 aa27.41■■□□□ 1.98
CHMP5-201ENST00000223500 FAM9AQ8IZU1 332 aaPredicted RBP27.34■■□□□ 1.97
CHMP5-201ENST00000223500 RUSC2Q8N2Y8 1516 aa27.34■■□□□ 1.97
CHMP5-201ENST00000223500 TDRD9Q8NDG6 1382 aaKnown RBP27.32■■□□□ 1.96
CHMP5-201ENST00000223500 GAPVD1Q14C86 1478 aa27.28■■□□□ 1.96
CHMP5-201ENST00000223500 ABCA5Q8WWZ7 1642 aa27.28■■□□□ 1.96
CHMP5-201ENST00000223500 ZNF608Q9ULD9 1512 aaPredicted RBP27.27■■□□□ 1.96
CHMP5-201ENST00000223500 CSRNP3Q8WYN3 585 aa27.25■■□□□ 1.95
CHMP5-201ENST00000223500 AQRO60306 1485 aaKnown RBP eCLIP27.24■■□□□ 1.957e-7■■■■□ 22.4
CHMP5-201ENST00000223500 EIF4G3O43432 1585 aaKnown RBP27.21■■□□□ 1.95
CHMP5-201ENST00000223500 IGF1RP08069 1367 aa27.17■■□□□ 1.94
CHMP5-201ENST00000223500 GRIN2BQ13224 1484 aa27.17■■□□□ 1.94
CHMP5-201ENST00000223500 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
CHMP5-201ENST00000223500 ERICH3Q5RHP9 1530 aa27.17■■□□□ 1.94
CHMP5-201ENST00000223500 CUL7Q14999 1698 aa27.09■■□□□ 1.93
CHMP5-201ENST00000223500 CARMIL1Q5VZK9 1371 aa27.06■■□□□ 1.92
CHMP5-201ENST00000223500 PRXQ9BXM0 1461 aa27.03■■□□□ 1.92
CHMP5-201ENST00000223500 KIF21BO75037 1637 aa27.03■■□□□ 1.92
CHMP5-201ENST00000223500 SNAPC4Q5SXM2 1469 aa27.01■■□□□ 1.91
CHMP5-201ENST00000223500 MAGI1Q96QZ7 1491 aaPredicted RBP27.01■■□□□ 1.91
CHMP5-201ENST00000223500 FHAD1B1AJZ9 1412 aa26.98■■□□□ 1.91
CHMP5-201ENST00000223500 ADAMTS12P58397 1594 aa26.98■■□□□ 1.91
CHMP5-201ENST00000223500 RAPGEF2Q9Y4G8 1499 aa26.97■■□□□ 1.91
CHMP5-201ENST00000223500 GOLGA3Q08378 1498 aa26.95■■□□□ 1.91
CHMP5-201ENST00000223500 EHMT2Q96KQ7 1210 aa26.93■■□□□ 1.9
CHMP5-201ENST00000223500 LOC105371045A0A1W2PR82 267 aa26.91■■□□□ 1.9
CHMP5-201ENST00000223500 SYNJ2O15056 1496 aa26.89■■□□□ 1.9
CHMP5-201ENST00000223500 CHMP7Q8WUX9 453 aaPredicted RBP26.87■■□□□ 1.89
CHMP5-201ENST00000223500 UBTFP17480 764 aaKnown RBP26.87■■□□□ 1.89
CHMP5-201ENST00000223500 FBLN2P98095 1184 aa26.82■■□□□ 1.88
CHMP5-201ENST00000223500 GRIN2AQ12879 1464 aa26.8■■□□□ 1.88
CHMP5-201ENST00000223500 CHD1O14646 1710 aa26.75■■□□□ 1.87
CHMP5-201ENST00000223500 TNIKQ9UKE5 1360 aa26.75■■□□□ 1.87
CHMP5-201ENST00000223500 CTTNBP2Q8WZ74 1663 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms