RNA–Protein interactions for RNA: ENST00000222990.7

SNX8-201, Transcript of sorting nexin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX8, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-201ENST00000222990 MAPK8IP3Q9UPT6 1336 aa25.68■■□□□ 1.7
SNX8-201ENST00000222990 JPH4Q96JJ6 628 aa25.68■■□□□ 1.7
SNX8-201ENST00000222990 ARXQ96QS3 562 aa25.68■■□□□ 1.7
SNX8-201ENST00000222990 RAD54L2Q9Y4B4 1467 aa25.68■■□□□ 1.7
SNX8-201ENST00000222990 HNRNPMP52272 730 aaKnown RBP eCLIP25.68■■□□□ 1.71e-6■■■■□ 26.2
SNX8-201ENST00000222990 EFCAB2Q5VUJ9 269 aa25.68■■□□□ 1.7
SNX8-201ENST00000222990 FGD6Q6ZV73 1430 aa25.67■■□□□ 1.7
SNX8-201ENST00000222990 RSPH4AQ5TD94 716 aa25.66■■□□□ 1.7
SNX8-201ENST00000222990 RCAN3Q9UKA8 241 aa25.65■■□□□ 1.7
SNX8-201ENST00000222990 POGKQ9P215 609 aa25.65■■□□□ 1.7
SNX8-201ENST00000222990 RRBP1Q9P2E9 1410 aaKnown RBP25.64■■□□□ 1.69
SNX8-201ENST00000222990 LAS1LQ9Y4W2 734 aaKnown RBP25.63■■□□□ 1.69
SNX8-201ENST00000222990 GAPVD1Q14C86 1478 aa25.63■■□□□ 1.69
SNX8-201ENST00000222990 PRXQ9BXM0 1461 aa25.63■■□□□ 1.69
SNX8-201ENST00000222990 PRKRIP1Q9H875 184 aaPredicted RBP25.62■■□□□ 1.69
SNX8-201ENST00000222990 CFTRP13569 1480 aa25.6■■□□□ 1.69
SNX8-201ENST00000222990 NLRP13Q86W25 1043 aa25.59■■□□□ 1.69
SNX8-201ENST00000222990 MYOM3Q5VTT5 1437 aa25.59■■□□□ 1.69
SNX8-201ENST00000222990 MORC1Q86VD1 984 aa25.58■■□□□ 1.69
SNX8-201ENST00000222990 U2SURPO15042 1029 aaKnown RBP25.57■■□□□ 1.68
SNX8-201ENST00000222990 UACAQ9BZF9 1416 aa25.57■■□□□ 1.68
SNX8-201ENST00000222990 MS4A1P11836 297 aa25.56■■□□□ 1.68
SNX8-201ENST00000222990 CASKIN1Q8WXD9 1431 aa25.56■■□□□ 1.68
SNX8-201ENST00000222990 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
SNX8-201ENST00000222990 ST20-MTHFSA0A0A6YYL1 179 aa25.54■■□□□ 1.68
SNX8-201ENST00000222990 CUX1P39880 1505 aa25.52■■□□□ 1.68
SNX8-201ENST00000222990 GGT6Q6P531 493 aa25.51■■□□□ 1.67
SNX8-201ENST00000222990 PDE3BQ13370 1112 aa25.5■■□□□ 1.67
SNX8-201ENST00000222990 KIF15Q9NS87 1388 aa25.5■■□□□ 1.67
SNX8-201ENST00000222990 TCERG1O14776 1098 aaKnown RBP25.49■■□□□ 1.67
SNX8-201ENST00000222990 PNNQ9H307 717 aaKnown RBP25.48■■□□□ 1.67
SNX8-201ENST00000222990 ZBED9Q6R2W3 1325 aa25.47■■□□□ 1.67
SNX8-201ENST00000222990 SRPK2P78362 688 aaKnown RBP25.47■■□□□ 1.67
SNX8-201ENST00000222990 USP47Q96K76 1375 aa25.47■■□□□ 1.67
SNX8-201ENST00000222990 MYBBP1AQ9BQG0 1328 aaKnown RBP25.46■■□□□ 1.67
SNX8-201ENST00000222990 CHMP4BQ9H444 224 aaKnown RBP25.45■■□□□ 1.66
SNX8-201ENST00000222990 NCOA2Q15596 1464 aa25.44■■□□□ 1.66
SNX8-201ENST00000222990 KIF3BO15066 747 aa25.44■■□□□ 1.66
SNX8-201ENST00000222990 C14orf37Q86TY3 774 aa25.44■■□□□ 1.66
SNX8-201ENST00000222990 CCDC144AA2RUR9 1427 aa25.44■■□□□ 1.66
SNX8-201ENST00000222990 FYCO1Q9BQS8 1478 aa25.43■■□□□ 1.66
SNX8-201ENST00000222990 SPAG9O60271 1321 aaKnown RBP25.43■■□□□ 1.66
SNX8-201ENST00000222990 GOLGA6L22H0YM25 854 aa25.43■■□□□ 1.66
SNX8-201ENST00000222990 SAFB2Q14151 953 aaKnown RBP eCLIP25.43■■□□□ 1.66
SNX8-201ENST00000222990 ARID4BQ4LE39 1312 aaPredicted RBP25.42■■□□□ 1.66
SNX8-201ENST00000222990 EIF3AQ14152 1382 aaKnown RBP25.42■■□□□ 1.66
SNX8-201ENST00000222990 ZNF644Q9H582 1327 aaPredicted RBP25.4■■□□□ 1.66
SNX8-201ENST00000222990 GOLGA2Q08379 1002 aa25.38■■□□□ 1.65
SNX8-201ENST00000222990 HMGXB3Q12766 1538 aa25.38■■□□□ 1.65
SNX8-201ENST00000222990 CCDC7Q96M83 1385 aa25.37■■□□□ 1.65
SNX8-201ENST00000222990 PTPRGP23470 1445 aa25.37■■□□□ 1.65
SNX8-201ENST00000222990 ZBTB7CA1YPR0 619 aa25.36■■□□□ 1.65
SNX8-201ENST00000222990 DEKP35659 375 aaKnown RBP25.36■■□□□ 1.65
SNX8-201ENST00000222990 CASC1Q6TDU7 716 aa25.35■■□□□ 1.65
SNX8-201ENST00000222990 PANK3Q9H999 370 aa25.35■■□□□ 1.65
SNX8-201ENST00000222990 STK26Q9P289 416 aa25.34■■□□□ 1.65
SNX8-201ENST00000222990 U2AF1L5P0DN76 240 aaPredicted RBP25.34■■□□□ 1.65
SNX8-201ENST00000222990 U2AF1Q01081 240 aaKnown RBP eCLIP25.34■■□□□ 1.65
SNX8-201ENST00000222990 KIF7Q2M1P5 1343 aa25.33■■□□□ 1.65
SNX8-201ENST00000222990 TRIM44Q96DX7 344 aaPredicted RBP25.31■■□□□ 1.64
SNX8-201ENST00000222990 AQRO60306 1485 aaKnown RBP eCLIP25.31■■□□□ 1.64
SNX8-201ENST00000222990 EFCAB5A4FU69 1503 aa25.31■■□□□ 1.64
SNX8-201ENST00000222990 IPO9Q96P70 1041 aaKnown RBP25.3■■□□□ 1.64
SNX8-201ENST00000222990 WASHC2AQ641Q2 1341 aa25.3■■□□□ 1.64
SNX8-201ENST00000222990 TIAM1Q13009 1591 aa25.3■■□□□ 1.64
SNX8-201ENST00000222990 PLEKHG5O94827 1062 aa25.3■■□□□ 1.64
SNX8-201ENST00000222990 CNTLNQ9NXG0 1405 aa25.29■■□□□ 1.64
SNX8-201ENST00000222990 HDGFL2Q7Z4V5 671 aaPredicted RBP25.28■■□□□ 1.64
SNX8-201ENST00000222990 NCLP19338 710 aaKnown RBP25.26■■□□□ 1.63
SNX8-201ENST00000222990 CCDC146Q8IYE0 955 aa25.26■■□□□ 1.63
SNX8-201ENST00000222990 HDGFP51858 240 aaKnown RBP25.24■■□□□ 1.63
SNX8-201ENST00000222990 IPO8O15397 1037 aaKnown RBP25.24■■□□□ 1.63
SNX8-201ENST00000222990 MLECQ14165 292 aa25.23■■□□□ 1.63
SNX8-201ENST00000222990 RWDD1Q9H446 243 aaPredicted RBP25.22■■□□□ 1.63
SNX8-201ENST00000222990 HSP90AB1P08238 724 aaKnown RBP25.22■■□□□ 1.63
SNX8-201ENST00000222990 HFM1A2PYH4 1435 aa25.22■■□□□ 1.63
SNX8-201ENST00000222990 ANKRD50Q9ULJ7 1429 aa25.22■■□□□ 1.63
SNX8-201ENST00000222990 RRP1P56182 461 aaKnown RBP25.22■■□□□ 1.63
SNX8-201ENST00000222990 TOPBP1Q92547 1522 aa25.2■■□□□ 1.63
SNX8-201ENST00000222990 POLA1P09884 1462 aaPredicted RBP25.2■■□□□ 1.63
SNX8-201ENST00000222990 GLIPR1L2Q4G1C9 344 aa25.2■■□□□ 1.62
SNX8-201ENST00000222990 HSCBQ8IWL3 235 aa25.2■■□□□ 1.62
SNX8-201ENST00000222990 BICRAQ9NZM4 1560 aa25.19■■□□□ 1.62
SNX8-201ENST00000222990 NESP48681 1621 aa25.18■■□□□ 1.62
SNX8-201ENST00000222990 HAP1P54257 671 aaPredicted RBP25.18■■□□□ 1.62
SNX8-201ENST00000222990 GRIN2BQ13224 1484 aa25.18■■□□□ 1.62
SNX8-201ENST00000222990 EXOC6Q8TAG9 804 aa25.18■■□□□ 1.62
SNX8-201ENST00000222990 CENPJQ9HC77 1338 aaPredicted RBP25.17■■□□□ 1.62
SNX8-201ENST00000222990 WASHC2CQ9Y4E1 1318 aa25.17■■□□□ 1.62
SNX8-201ENST00000222990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.17■■□□□ 1.62
SNX8-201ENST00000222990 RTN4Q9NQC3 1192 aaKnown RBP25.17■■□□□ 1.62
SNX8-201ENST00000222990 PMFBP1Q8TBY8 1022 aa25.16■■□□□ 1.62
SNX8-201ENST00000222990 TRAK1Q9UPV9 953 aa25.16■■□□□ 1.62
SNX8-201ENST00000222990 TERF2IPQ9NYB0 399 aa25.14■■□□□ 1.62
SNX8-201ENST00000222990 EHBP1L1Q8N3D4 1523 aa25.14■■□□□ 1.62
SNX8-201ENST00000222990 FANCIQ9NVI1 1328 aa25.14■■□□□ 1.61
SNX8-201ENST00000222990 CALD1Q05682 793 aaKnown RBP25.13■■□□□ 1.61
SNX8-201ENST00000222990 MIA2Q96PC5 1412 aa25.13■■□□□ 1.61
SNX8-201ENST00000222990 PLIN1O60240 522 aa25.13■■□□□ 1.61
SNX8-201ENST00000222990 ITPRIPQ8IWB1 547 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms