RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 CDC42BPBQ9Y5S2 1711 aa36.89■■■■□ 3.5
HOMER3-201ENST00000221222 CFAP74Q9C0B2 1584 aa36.87■■■■□ 3.49
HOMER3-201ENST00000221222 GPATCH8Q9UKJ3 1502 aaKnown RBP36.86■■■■□ 3.49
HOMER3-201ENST00000221222 NEO1Q92859 1461 aa36.86■■■■□ 3.49
HOMER3-201ENST00000221222 FANCAO15360 1455 aa36.85■■■■□ 3.49
HOMER3-201ENST00000221222 CCNB3Q8WWL7 1395 aa36.84■■■■□ 3.49
HOMER3-201ENST00000221222 ITSN2Q9NZM3 1697 aa36.83■■■■□ 3.49
HOMER3-201ENST00000221222 PHLDB1Q86UU1 1377 aa36.83■■■■□ 3.49
HOMER3-201ENST00000221222 ARHGAP5Q13017 1502 aa36.82■■■■□ 3.48
HOMER3-201ENST00000221222 EFCAB2Q5VUJ9 269 aa36.78■■■■□ 3.48
HOMER3-201ENST00000221222 AKNAQ7Z591 1439 aa36.75■■■■□ 3.47
HOMER3-201ENST00000221222 CFDP1Q9UEE9 299 aaPredicted RBP36.69■■■■□ 3.46
HOMER3-201ENST00000221222 MYOM3Q5VTT5 1437 aa36.67■■■■□ 3.46
HOMER3-201ENST00000221222 SAMD9LQ8IVG5 1584 aa36.65■■■■□ 3.46
HOMER3-201ENST00000221222 RAPGEF3O95398 923 aa36.65■■■■□ 3.46
HOMER3-201ENST00000221222 ABCC1P33527 1531 aa36.62■■■■□ 3.45
HOMER3-201ENST00000221222 MIA2Q96PC5 1412 aa36.6■■■■□ 3.45
HOMER3-201ENST00000221222 SCAPERQ9BY12 1400 aa36.59■■■■□ 3.45
HOMER3-201ENST00000221222 PPARGC1BQ86YN6 1023 aaKnown RBP36.58■■■■□ 3.45
HOMER3-201ENST00000221222 DENND4BO75064 1496 aaPredicted RBP36.57■■■■□ 3.45
HOMER3-201ENST00000221222 PLEKHH2Q8IVE3 1493 aa36.57■■■■□ 3.45
HOMER3-201ENST00000221222 RICTORQ6R327 1708 aa36.57■■■■□ 3.45
HOMER3-201ENST00000221222 ZNF777Q9ULD5 760 aaPredicted RBP36.57■■■■□ 3.45
HOMER3-201ENST00000221222 FRMPD1Q5SYB0 1578 aa36.55■■■■□ 3.44
HOMER3-201ENST00000221222 KIAA1107Q9UPP5 1409 aa36.54■■■■□ 3.44
HOMER3-201ENST00000221222 ARHGEF12Q9NZN5 1544 aa36.53■■■■□ 3.44
HOMER3-201ENST00000221222 CAMSAP2Q08AD1 1489 aa36.53■■■■□ 3.44
HOMER3-201ENST00000221222 POGZQ7Z3K3 1410 aa36.52■■■■□ 3.44
HOMER3-201ENST00000221222 FGD6Q6ZV73 1430 aa36.51■■■■□ 3.44
HOMER3-201ENST00000221222 SYCP2Q9BX26 1530 aa36.51■■■■□ 3.43
HOMER3-201ENST00000221222 ZNF644Q9H582 1327 aaPredicted RBP36.5■■■■□ 3.43
HOMER3-201ENST00000221222 PTPN23Q9H3S7 1636 aa36.47■■■■□ 3.43
HOMER3-201ENST00000221222 ZNF518AQ6AHZ1 1483 aa36.46■■■■□ 3.43
HOMER3-201ENST00000221222 TCOF1Q13428 1488 aaKnown RBP36.44■■■■□ 3.42
HOMER3-201ENST00000221222 MBD5Q9P267 1494 aa36.44■■■■□ 3.42
HOMER3-201ENST00000221222 ZMYM4Q5VZL5 1548 aa36.44■■■■□ 3.42
HOMER3-201ENST00000221222 KDM5CP41229 1560 aa36.44■■■■□ 3.42
HOMER3-201ENST00000221222 TRAPPC8Q9Y2L5 1435 aa36.43■■■■□ 3.42
HOMER3-201ENST00000221222 HECW2Q9P2P5 1572 aa36.42■■■■□ 3.42
HOMER3-201ENST00000221222 HNRNPMP52272 730 aaKnown RBP eCLIP36.4■■■■□ 3.42
HOMER3-201ENST00000221222 ARHGEF5Q12774 1597 aa36.39■■■■□ 3.42
HOMER3-201ENST00000221222 AFAP1Q8N556 730 aa36.37■■■■□ 3.41
HOMER3-201ENST00000221222 ARID4BQ4LE39 1312 aaPredicted RBP36.36■■■■□ 3.41
HOMER3-201ENST00000221222 MAGI2Q86UL8 1455 aa36.33■■■■□ 3.41
HOMER3-201ENST00000221222 RSPH4AQ5TD94 716 aa36.33■■■■□ 3.41
HOMER3-201ENST00000221222 ARHGEF40Q8TER5 1519 aa36.33■■■■□ 3.41
HOMER3-201ENST00000221222 CCDC141Q6ZP82 1450 aa36.33■■■■□ 3.41
HOMER3-201ENST00000221222 ADAMTSL3P82987 1691 aa36.32■■■■□ 3.41
HOMER3-201ENST00000221222 MLH3Q9UHC1 1453 aa36.3■■■■□ 3.4
HOMER3-201ENST00000221222 BCORL1Q5H9F3 1711 aa36.28■■■■□ 3.4
HOMER3-201ENST00000221222 RRBP1Q9P2E9 1410 aaKnown RBP36.27■■■■□ 3.4
HOMER3-201ENST00000221222 ZFYVE16Q7Z3T8 1539 aa36.26■■■■□ 3.39
HOMER3-201ENST00000221222 DNMT1P26358 1616 aaKnown RBP36.25■■■■□ 3.39
HOMER3-201ENST00000221222 INO80Q9ULG1 1556 aaPredicted RBP36.25■■■■□ 3.39
HOMER3-201ENST00000221222 KIDINS220Q9ULH0 1771 aa36.24■■■■□ 3.39
HOMER3-201ENST00000221222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.23■■■■□ 3.39
HOMER3-201ENST00000221222 PTPRMP28827 1452 aa36.23■■■■□ 3.39
HOMER3-201ENST00000221222 MADDQ8WXG6 1647 aa36.22■■■■□ 3.39
HOMER3-201ENST00000221222 CROCC2H7BZ55 1655 aa36.22■■■■□ 3.39
HOMER3-201ENST00000221222 SPAG9O60271 1321 aaKnown RBP36.22■■■■□ 3.39
HOMER3-201ENST00000221222 FAM50AQ14320 339 aaKnown RBP36.21■■■■□ 3.39
HOMER3-201ENST00000221222 YEATS2Q9ULM3 1422 aa36.21■■■■□ 3.39
HOMER3-201ENST00000221222 ATP7AQ04656 1500 aa36.2■■■■□ 3.39
HOMER3-201ENST00000221222 RTEL1-TNFRSF6BF6WH68 1400 aa36.19■■■■□ 3.38
HOMER3-201ENST00000221222 ABCC5O15440 1437 aa36.19■■■■□ 3.38
HOMER3-201ENST00000221222 DAPK1P53355 1430 aa36.19■■■■□ 3.38
HOMER3-201ENST00000221222 MAST1Q9Y2H9 1570 aa36.19■■■■□ 3.38
HOMER3-201ENST00000221222 SHANK2Q9UPX8 1470 aa36.17■■■■□ 3.38
HOMER3-201ENST00000221222 ABCA6Q8N139 1617 aa36.16■■■■□ 3.38
HOMER3-201ENST00000221222 DIP2CQ9Y2E4 1556 aa36.16■■■■□ 3.38
HOMER3-201ENST00000221222 TSPY4P0CV99 314 aa36.15■■■■□ 3.38
HOMER3-201ENST00000221222 TSPY10P0CW01 314 aa36.15■■■■□ 3.38
HOMER3-201ENST00000221222 SIGLEC1Q9BZZ2 1709 aa36.13■■■■□ 3.37
HOMER3-201ENST00000221222 RIMS1Q86UR5 1692 aaKnown RBP36.12■■■■□ 3.37
HOMER3-201ENST00000221222 MYT1LQ9UL68 1186 aa36.12■■■■□ 3.37
HOMER3-201ENST00000221222 C9orf84Q5VXU9 1444 aa36.12■■■■□ 3.37
HOMER3-201ENST00000221222 ATP10AO60312 1499 aa36.1■■■■□ 3.37
HOMER3-201ENST00000221222 REREQ9P2R6 1566 aa36.08■■■■□ 3.37
HOMER3-201ENST00000221222 ADGBQ8N7X0 1667 aa36.05■■■■□ 3.36
HOMER3-201ENST00000221222 MLECQ14165 292 aa36.05■■■■□ 3.36
HOMER3-201ENST00000221222 PLPPR3Q6T4P5 718 aa36.05■■■■□ 3.36
HOMER3-201ENST00000221222 PLXNC1O60486 1568 aa36.05■■■■□ 3.36
HOMER3-201ENST00000221222 PTPRKQ15262 1439 aa36■■■■□ 3.35
HOMER3-201ENST00000221222 ADGRL2O95490 1459 aa35.99■■■■□ 3.35
HOMER3-201ENST00000221222 ILDR1Q86SU0 546 aaPredicted RBP35.97■■■■□ 3.35
HOMER3-201ENST00000221222 A2MP01023 1474 aa35.97■■■■□ 3.35
HOMER3-201ENST00000221222 AGLP35573 1532 aa35.93■■■■□ 3.34
HOMER3-201ENST00000221222 NCOA1Q15788 1441 aa35.92■■■■□ 3.34
HOMER3-201ENST00000221222 ANKRD30AQ9BXX3 1397 aa35.92■■■■□ 3.34
HOMER3-201ENST00000221222 CHIC2Q9UKJ5 165 aa35.92■■■■□ 3.34
HOMER3-201ENST00000221222 FER1L4A9Z1Z3 1794 aa35.92■■■■□ 3.34
HOMER3-201ENST00000221222 DHX29Q7Z478 1369 aaKnown RBP35.9■■■■□ 3.34
HOMER3-201ENST00000221222 ROCK1Q13464 1354 aa35.89■■■■□ 3.34
HOMER3-201ENST00000221222 ITGAEP38570 1179 aa35.89■■■■□ 3.34
HOMER3-201ENST00000221222 KIF15Q9NS87 1388 aa35.88■■■■□ 3.33
HOMER3-201ENST00000221222 DUOX2Q9NRD8 1548 aa35.88■■■■□ 3.33
HOMER3-201ENST00000221222 LMTK3Q96Q04 1460 aa35.87■■■■□ 3.33
HOMER3-201ENST00000221222 RRP7BPQ9NSQ0 103 aa35.83■■■■□ 3.33
HOMER3-201ENST00000221222 EIF2AK4Q9P2K8 1649 aaKnown RBP35.8■■■■□ 3.32
HOMER3-201ENST00000221222 ERBINQ96RT1 1412 aa35.78■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms