RNA–Protein interactions for RNA: ENSMUST00000208589.1

Smarca2-238, Transcript of Probable global transcription activator SNF2L2, mouse

TSL 5 BASIC

Gene Smarca2, Length 1,054 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Smarca2-238	ENSMUST00000208589	Abcc1	O35379	1528 aa		11.87	□□□□□ -0.51
Smarca2-238	ENSMUST00000208589	Gm156	Q58A37	223 aa		11.87	□□□□□ -0.51
Smarca2-238	ENSMUST00000208589	Arhgap35	Q91YM2	1499 aa		11.87	□□□□□ -0.51
Smarca2-238	ENSMUST00000208589	Gm14025	A2AP89	1413 aa		11.86	□□□□□ -0.51
Smarca2-238	ENSMUST00000208589	Cep162	Q6ZQ06	1403 aa		11.86	□□□□□ -0.51
Smarca2-238	ENSMUST00000208589	Polr1a	O35134	1717 aa	Known RBP	11.86	□□□□□ -0.51
Smarca2-238	ENSMUST00000208589	Adgrl3	Q80TS3	1537 aa		11.86	□□□□□ -0.51
Smarca2-238	ENSMUST00000208589	Ythdc2	B2RR83	1445 aa	Known RBP	11.85	□□□□□ -0.51
Smarca2-238	ENSMUST00000208589	Adamts12	Q811B3	1600 aa		11.83	□□□□□ -0.52
Smarca2-238	ENSMUST00000208589	Gm7298	A0A0N4SVU1	1476 aa		11.83	□□□□□ -0.52
Smarca2-238	ENSMUST00000208589	Neo1	P97798	1493 aa		11.83	□□□□□ -0.52
Smarca2-238	ENSMUST00000208589	Setd1b	Q8CFT2	1985 aa		11.82	□□□□□ -0.52
Smarca2-238	ENSMUST00000208589	Jph4	Q80WT0	628 aa		11.82	□□□□□ -0.52
Smarca2-238	ENSMUST00000208589	Crebzf	Q91ZR3	358 aa		11.82	□□□□□ -0.52
Smarca2-238	ENSMUST00000208589	Pxdn	Q3UQ28	1475 aa		11.82	□□□□□ -0.52
Smarca2-238	ENSMUST00000208589	Cep170	Q6A065	1588 aa		11.81	□□□□□ -0.52
Smarca2-238	ENSMUST00000208589	Kiaa1522	A2A7S8	1013 aa		11.81	□□□□□ -0.52
Smarca2-238	ENSMUST00000208589	TMEM121B	Q99MX7	572 aa		11.81	□□□□□ -0.52
Smarca2-238	ENSMUST00000208589	Map3k4	O08648	1597 aa		11.8	□□□□□ -0.52
Smarca2-238	ENSMUST00000208589	Fyco1	Q8VDC1	1437 aa		11.8	□□□□□ -0.52
Smarca2-238	ENSMUST00000208589	Wiz	O88286	1684 aa	Known RBP	11.78	□□□□□ -0.52
Smarca2-238	ENSMUST00000208589	Dnmt1	P13864	1620 aa	Known RBP	11.78	□□□□□ -0.52
Smarca2-238	ENSMUST00000208589	Abcc2	Q8VI47	1543 aa		11.77	□□□□□ -0.52
Smarca2-238	ENSMUST00000208589	Pygb	Q8CI94	843 aa	Known RBP	11.77	□□□□□ -0.53
Smarca2-238	ENSMUST00000208589	Wrn	O09053	1401 aa		11.77	□□□□□ -0.53
Smarca2-238	ENSMUST00000208589	Igf1r	Q60751	1373 aa		11.75	□□□□□ -0.53
Smarca2-238	ENSMUST00000208589	Abca16	E9PWJ7	1678 aa		11.75	□□□□□ -0.53
Smarca2-238	ENSMUST00000208589	Ptprt	Q99M80	1454 aa		11.74	□□□□□ -0.53
Smarca2-238	ENSMUST00000208589	Arhgef5	E9Q7D5	1581 aa		11.74	□□□□□ -0.53
Smarca2-238	ENSMUST00000208589	Slx4	Q6P1D7	1565 aa		11.73	□□□□□ -0.53
Smarca2-238	ENSMUST00000208589	Fkbp15	Q6P9Q6	1216 aa	Known RBP	11.72	□□□□□ -0.53
Smarca2-238	ENSMUST00000208589	Hdac5	Q9Z2V6	1113 aa		11.72	□□□□□ -0.53
Smarca2-238	ENSMUST00000208589	AI481877	A2ALV5	1481 aa		11.71	□□□□□ -0.53
Smarca2-238	ENSMUST00000208589	Osbp	Q3B7Z2	805 aa		11.71	□□□□□ -0.53
Smarca2-238	ENSMUST00000208589	Arhgef12	Q8R4H2	1543 aa	Known RBP	11.7	□□□□□ -0.54
Smarca2-238	ENSMUST00000208589	Zbtb7b	Q64321	544 aa		11.7	□□□□□ -0.54
Smarca2-238	ENSMUST00000208589	Ppp1r18	Q8BQ30	594 aa		11.7	□□□□□ -0.54
Smarca2-238	ENSMUST00000208589	Setd5	Q5XJV7	1441 aa		11.69	□□□□□ -0.54
Smarca2-238	ENSMUST00000208589	Eif4g1	Q6NZJ6	1600 aa	Known RBP	11.69	□□□□□ -0.54
Smarca2-238	ENSMUST00000208589	Mycn	P03966	462 aa	Known RBP	11.69	□□□□□ -0.54
Smarca2-238	ENSMUST00000208589	Aebp1	Q640N1	1128 aa		11.69	□□□□□ -0.54
Smarca2-238	ENSMUST00000208589	Cux1	P53564	1515 aa		11.68	□□□□□ -0.54
Smarca2-238	ENSMUST00000208589	Eea1	Q8BL66	1411 aa		11.68	□□□□□ -0.54
Smarca2-238	ENSMUST00000208589	Abca5	Q8K448	1642 aa		11.68	□□□□□ -0.54
Smarca2-238	ENSMUST00000208589	BC005561	E9Q5E2	1589 aa		11.67	□□□□□ -0.54
Smarca2-238	ENSMUST00000208589	Pde4d	Q01063	747 aa		11.67	□□□□□ -0.54
Smarca2-238	ENSMUST00000208589	Ube2u	B1AUC4	352 aa		11.65	□□□□□ -0.54
Smarca2-238	ENSMUST00000208589	Arhgap31	A6X8Z5	1425 aa		11.65	□□□□□ -0.54
Smarca2-238	ENSMUST00000208589	Kif27	Q7M6Z4	1394 aa		11.65	□□□□□ -0.55
Smarca2-238	ENSMUST00000208589	Chd1	P40201	1711 aa		11.64	□□□□□ -0.55
Smarca2-238	ENSMUST00000208589	Rrbp1	Q99PL5	1605 aa	Known RBP	11.64	□□□□□ -0.55
Smarca2-238	ENSMUST00000208589	Ncoa2	Q61026	1462 aa		11.63	□□□□□ -0.55
Smarca2-238	ENSMUST00000208589	Gm13697	A2AK42	830 aa		11.63	□□□□□ -0.55
Smarca2-238	ENSMUST00000208589	Atad2	Q8CDM1	1040 aa		11.63	□□□□□ -0.55
Smarca2-238	ENSMUST00000208589	Kdm5b	Q80Y84	1544 aa		11.62	□□□□□ -0.55
Smarca2-238	ENSMUST00000208589	Lhx8	O35652	367 aa		11.62	□□□□□ -0.55
Smarca2-238	ENSMUST00000208589	Setbp1	Q9Z180	1582 aa		11.62	□□□□□ -0.55
Smarca2-238	ENSMUST00000208589	Ccdc141	E9Q8Q6	1531 aa		11.6	□□□□□ -0.55
Smarca2-238	ENSMUST00000208589	Dmrta2	A2A9A2	531 aa		11.6	□□□□□ -0.55
Smarca2-238	ENSMUST00000208589	Arid3c	A6PWV5	409 aa		11.6	□□□□□ -0.55
Smarca2-238	ENSMUST00000208589	Pdap1	Q3UHX2	181 aa	Known RBP	11.59	□□□□□ -0.55
Smarca2-238	ENSMUST00000208589	Repin1	Q5U4E2	545 aa		11.59	□□□□□ -0.55
Smarca2-238	ENSMUST00000208589	Dhx57	Q6P5D3	1388 aa	Known RBP	11.58	□□□□□ -0.56
Smarca2-238	ENSMUST00000208589	Rnf225	Q9D7D1	332 aa		11.58	□□□□□ -0.56
Smarca2-238	ENSMUST00000208589	Ap3b1	Q9Z1T1	1105 aa		11.58	□□□□□ -0.56
Smarca2-238	ENSMUST00000208589	Ankrd26	Q811D2	1581 aa		11.58	□□□□□ -0.56
Smarca2-238	ENSMUST00000208589	Cntln	A2AM05	1397 aa		11.57	□□□□□ -0.56
Smarca2-238	ENSMUST00000208589	Gm45233	A0A0N4SVE0	221 aa		11.57	□□□□□ -0.56
Smarca2-238	ENSMUST00000208589	Pcdh10	E9PXQ7	1057 aa		11.57	□□□□□ -0.56
Smarca2-238	ENSMUST00000208589	Blm	O88700	1416 aa		11.57	□□□□□ -0.56
Smarca2-238	ENSMUST00000208589	Wdr7	Q920I9	1489 aa		11.57	□□□□□ -0.56
Smarca2-238	ENSMUST00000208589	Pprc1	Q6NZN1	1644 aa		11.57	□□□□□ -0.56
Smarca2-238	ENSMUST00000208589	Fam117b	Q3U3E2	584 aa		11.54	□□□□□ -0.56
Smarca2-238	ENSMUST00000208589	Atp10d	Q8K2X1	1416 aa		11.53	□□□□□ -0.56
Smarca2-238	ENSMUST00000208589	Fancd2	Q80V62	1450 aa		11.53	□□□□□ -0.56
Smarca2-238	ENSMUST00000208589	Clasp1	Q80TV8	1535 aa	Known RBP	11.53	□□□□□ -0.56
Smarca2-238	ENSMUST00000208589	Magi1	Q6RHR9	1471 aa		11.51	□□□□□ -0.57
Smarca2-238	ENSMUST00000208589	Lrrc9	Q8CDN9	1456 aa		11.51	□□□□□ -0.57
Smarca2-238	ENSMUST00000208589	Dcbld2	Q91ZV3	769 aa		11.51	□□□□□ -0.57
Smarca2-238	ENSMUST00000208589	Znf516	Q7TSH3	1157 aa		11.5	□□□□□ -0.57
Smarca2-238	ENSMUST00000208589	Rapgef6	Q5NCJ1	1609 aa		11.49	□□□□□ -0.57
Smarca2-238	ENSMUST00000208589	Arap1	Q4LDD4	1452 aa		11.49	□□□□□ -0.57
Smarca2-238	ENSMUST00000208589	Ak9	G3UYQ4	1894 aa		11.48	□□□□□ -0.57
Smarca2-238	ENSMUST00000208589	Erich3	F6QRE9	1637 aa		11.47	□□□□□ -0.57
Smarca2-238	ENSMUST00000208589	Zxdb	A2CE44	873 aa		11.47	□□□□□ -0.57
Smarca2-238	ENSMUST00000208589	Nhs	B1AV60	1647 aa		11.46	□□□□□ -0.57
Smarca2-238	ENSMUST00000208589	Zfyve16	Q80U44	1528 aa		11.46	□□□□□ -0.57
Smarca2-238	ENSMUST00000208589	Lmod2	Q3UHZ5	550 aa		11.46	□□□□□ -0.57
Smarca2-238	ENSMUST00000208589	Tulp1	Q9Z273	543 aa		11.45	□□□□□ -0.58
Smarca2-238	ENSMUST00000208589	Kiaa1210	E9Q0C6	1637 aa		11.45	□□□□□ -0.58
Smarca2-238	ENSMUST00000208589	Pcf11	G3X9Z4	1553 aa		11.45	□□□□□ -0.58
Smarca2-238	ENSMUST00000208589	Mug1	P28665	1476 aa		11.44	□□□□□ -0.58
Smarca2-238	ENSMUST00000208589	Arhgef1	Q61210	920 aa	Known RBP	11.44	□□□□□ -0.58
Smarca2-238	ENSMUST00000208589	Lmo7	E9PYF4	1699 aa	Known RBP	11.43	□□□□□ -0.58
Smarca2-238	ENSMUST00000208589	Cdk11b	P24788	784 aa	Known RBP	11.43	□□□□□ -0.58
Smarca2-238	ENSMUST00000208589	Ndufv2	Q9D6J6	248 aa		11.43	□□□□□ -0.58
Smarca2-238	ENSMUST00000208589	Znf608	Q56A10	1511 aa		11.43	□□□□□ -0.58
Smarca2-238	ENSMUST00000208589	Ncoa3	O09000	1398 aa		11.42	□□□□□ -0.58
Smarca2-238	ENSMUST00000208589	A2m	Q6GQT1	1474 aa		11.42	□□□□□ -0.58
Smarca2-238	ENSMUST00000208589	Ttc37	F8VPK0	1563 aa		11.41	□□□□□ -0.58

Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms