RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Dhx57Q6P5D3 1388 aaKnown RBP20.79■□□□□ 0.92
Pcdh1-203ENSMUST00000160721 Cwc22Q8C5N3 908 aaKnown RBP20.77■□□□□ 0.92
Pcdh1-203ENSMUST00000160721 Ifit1bl1D3Z6F0 470 aa20.76■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Bcl11aQ9QYE3 773 aa20.75■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Urb2E9Q7L1 1524 aaKnown RBP20.75■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Dbr1Q923B1 550 aa20.75■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Htatsf1Q8BGC0 757 aa20.75■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Jph4Q80WT0 628 aa20.74■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Neurod2Q62414 383 aa20.73■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Sox12Q04890 314 aa20.72■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Spryd3E9Q9B3 442 aa20.71■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Ppm1gQ61074 542 aa20.68■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Mapk8ip3Q9ESN9 1337 aa20.66■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 B4galnt3Q6L8S8 986 aa20.66■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Mphosph9A6H5Y1 991 aa20.66■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Ecm2Q5FW85 670 aa20.66■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Znf316Q6PGE4 1016 aa20.66■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Armcx1Q9CX83 456 aa20.65■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Ccnb3Q810T2 1396 aa20.65■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Rad54l2Q99NG0 1466 aa20.65■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Slc4a3P16283 1227 aa20.64■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Nup155Q99P88 1391 aaKnown RBP20.64■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Rtn4Q99P72 1162 aaKnown RBP20.63■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Gtf2e1Q9D0D5 440 aa20.62■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Rundc1Q0VDN7 615 aa20.62■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Mrc2Q64449 1479 aa20.62■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Dnajc5bQ9CQ94 199 aa20.61■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Plekhh2Q8C115 1491 aa20.61■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Arhgap35Q91YM2 1499 aa20.6■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 1700019A02RikA0A087WPV9 146 aa20.6■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Irx3P81067 507 aa20.6■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Shroom4Q1W617 1475 aa20.58■□□□□ 0.88
Pcdh1-203ENSMUST00000160721 Plin1Q8CGN5 517 aa20.57■□□□□ 0.88
Pcdh1-203ENSMUST00000160721 Rsph4aQ8BYM7 716 aa20.56■□□□□ 0.88
Pcdh1-203ENSMUST00000160721 Frmpd1A2AKB4 1549 aa20.53■□□□□ 0.88
Pcdh1-203ENSMUST00000160721 Gm6268A2A3U9 297 aa20.53■□□□□ 0.88
Pcdh1-203ENSMUST00000160721 Efcab5A0JP43 1406 aa20.52■□□□□ 0.88
Pcdh1-203ENSMUST00000160721 Tdrd9Q14BI7 1383 aa20.52■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Iqcf3Q9D498 203 aa20.51■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Cc2d2bA0A286YDU8 1405 aa20.5■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Duox2A2AQ99 1517 aa20.5■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Wwc2Q6NXJ0 1187 aa20.49■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Birc3O08863 600 aa20.48■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Fan1Q69ZT1 1020 aa20.48■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Map7O88735 730 aa20.48■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Utp14aQ640M1 767 aaKnown RBP20.47■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Spag9Q58A65 1321 aaKnown RBP20.47■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Casc1Q6TDU8 730 aa20.46■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Zfp777B9EKF4 885 aa20.46■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Q8BT18 775 aa20.45■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Sin3aQ60520 1274 aaKnown RBP20.44■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Pip4k2bQ80XI4 416 aa20.44■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Supt16hQ920B9 1047 aa20.44■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Ncoa2Q61026 1462 aa20.43■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Dnttip2Q8R2M2 758 aaKnown RBP20.43■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Fhad1A6PWD2 1420 aa20.42■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Fgd6Q69ZL1 1399 aa20.42■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Cc2d2aQ8CFW7 1633 aa20.42■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 HdgfP51859 237 aaKnown RBP20.41■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 NudcO35685 332 aaKnown RBP20.4■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 BicraF8VPZ9 1578 aa20.4■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Znf326O88291 580 aa20.4■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Tcerg1Q8CGF7 1100 aaKnown RBP20.4■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Bcl11bQ99PV8 884 aa20.4■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Srcin1Q9QWI6 1250 aa20.4■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 AU015836B2RUM3 263 aa20.39■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Erich6bQ9D4S6 220 aa20.38■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Shq1Q7TMX5 569 aa20.38■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Rwdd1Q9CQK7 243 aa20.37■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Hsp90b1P08113 802 aaKnown RBP20.36■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Dcaf11Q91VU6 549 aa20.36■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Ubap1lG3UW59 384 aa20.36■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 PnnO35691 725 aaKnown RBP20.36■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Plb1Q3TTY0 1478 aa20.36■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 PogzQ8BZH4 1409 aaKnown RBP20.35■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Chmp4bQ9D8B3 224 aaKnown RBP20.34■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Ap3b2Q9JME5 1082 aa20.34■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Tmf1B9EKI3 1091 aa20.34■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Pes1Q9EQ61 584 aaKnown RBP20.34■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Rock2P70336 1388 aa20.34■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Adam1bQ8R534 806 aa20.33■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Rtf1A2AQ19 715 aaKnown RBP20.33■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Mbd3Q9Z2D8 285 aaKnown RBP20.32■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Chmp5Q9D7S9 219 aa20.32■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 KnstrnQ9D9Z1 312 aaKnown RBP20.31■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 U2surpQ6NV83 1029 aaKnown RBP20.31■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Dnai1Q8C0M8 701 aa20.31■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Tnnt2P50752 301 aa20.3■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Clstn1Q9EPL2 979 aa20.3■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Arhgap31A6X8Z5 1425 aa20.3■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 U2af1Q9D883 239 aaKnown RBP20.29■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 UacaQ8CGB3 1411 aa20.28■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Exoc6Q8R313 802 aa20.27■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Senp3Q9EP97 568 aaKnown RBP20.27■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Tnnt1O88346 262 aa20.26■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Top2aQ01320 1528 aaKnown RBP20.26■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Grin2bQ01097 1482 aa20.26■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Ipo9Q91YE6 1041 aa20.25■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Pak3Q61036 559 aa20.25■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Gm14025A2AP89 1413 aa20.25■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms