RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 CanxP35564 591 aaKnown RBP11.73□□□□□ -0.53
Col28a1-201ENSMUST00000115537 Washc2Q6PGL7 1334 aa11.73□□□□□ -0.53
Col28a1-201ENSMUST00000115537 Grwd1Q810D6 446 aaKnown RBP11.72□□□□□ -0.53
Col28a1-201ENSMUST00000115537 Mroh3A0A1D5RM54 893 aa11.72□□□□□ -0.53
Col28a1-201ENSMUST00000115537 Map4P27546 1125 aaKnown RBP11.72□□□□□ -0.53
Col28a1-201ENSMUST00000115537 Dhx57Q6P5D3 1388 aaKnown RBP11.71□□□□□ -0.53
Col28a1-201ENSMUST00000115537 CadpsQ80TJ1 1355 aa11.71□□□□□ -0.53
Col28a1-201ENSMUST00000115537 Gm14025A2AP89 1413 aa11.71□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Ccnb3Q810T2 1396 aa11.7□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Tdrd9Q14BI7 1383 aa11.69□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Arhgap35Q91YM2 1499 aa11.69□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Arhgap31A6X8Z5 1425 aa11.69□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Mroh2bQ7M6Y6 1581 aa11.68□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Gm7298A0A0N4SVU1 1476 aa11.68□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Top2bQ64511 1612 aa11.68□□□□□ -0.54
Col28a1-201ENSMUST00000115537 EprsQ8CGC7 1512 aaKnown RBP11.68□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Taok2Q6ZQ29 1240 aa11.67□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Trak1Q6PD31 939 aa11.67□□□□□ -0.54
Col28a1-201ENSMUST00000115537 ChgaP26339 463 aaKnown RBP11.66□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Ofd1Q80Z25 1017 aa11.66□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Grin2aP35436 1464 aa11.66□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Sin3aQ60520 1274 aaKnown RBP11.65□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Arid4bA2CG63 1314 aaKnown RBP11.65□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Neo1P97798 1493 aa11.65□□□□□ -0.54
Col28a1-201ENSMUST00000115537 AU015836B2RUM3 263 aa11.65□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Hspa5P20029 655 aaKnown RBP11.65□□□□□ -0.54
Col28a1-201ENSMUST00000115537 Smg6P61406 1418 aaKnown RBP11.64□□□□□ -0.55
Col28a1-201ENSMUST00000115537 Gm156Q58A37 223 aa11.64□□□□□ -0.55
Col28a1-201ENSMUST00000115537 Wwc2Q6NXJ0 1187 aa11.63□□□□□ -0.55
Col28a1-201ENSMUST00000115537 Rtn4Q99P72 1162 aaKnown RBP11.63□□□□□ -0.55
Col28a1-201ENSMUST00000115537 Srpk2O54781 681 aaKnown RBP11.61□□□□□ -0.55
Col28a1-201ENSMUST00000115537 Liat1Q810M6 228 aa11.61□□□□□ -0.55
Col28a1-201ENSMUST00000115537 Iqcf3Q9D498 203 aa11.6□□□□□ -0.55
Col28a1-201ENSMUST00000115537 Gm20521D3Z5F7 333 aa11.6□□□□□ -0.55
Col28a1-201ENSMUST00000115537 Mia2Q91ZV0 1396 aa11.59□□□□□ -0.55
Col28a1-201ENSMUST00000115537 ArxO35085 564 aa11.59□□□□□ -0.55
Col28a1-201ENSMUST00000115537 Pkd2O35245 966 aa11.59□□□□□ -0.55
Col28a1-201ENSMUST00000115537 Txndc2Q6P902 515 aa11.59□□□□□ -0.55
Col28a1-201ENSMUST00000115537 Pdcl3Q8BVF2 240 aa11.59□□□□□ -0.55
Col28a1-201ENSMUST00000115537 Disp1Q3TDN0 1521 aa11.58□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Ncapd3Q6ZQK0 1506 aa11.58□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Ncoa2Q61026 1462 aa11.58□□□□□ -0.56
Col28a1-201ENSMUST00000115537 NgefQ8CHT1 710 aa11.57□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Polr1aO35134 1717 aaKnown RBP11.56□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Plekhh2Q8C115 1491 aa11.56□□□□□ -0.56
Col28a1-201ENSMUST00000115537 SynmQ70IV5 1561 aa11.56□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Exoc6Q8R313 802 aa11.55□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Ythdc2B2RR83 1445 aaKnown RBP11.55□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Kif21aQ9QXL2 1672 aa11.55□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Mphosph9A6H5Y1 991 aa11.54□□□□□ -0.56
Col28a1-201ENSMUST00000115537 IqubQ8CDK3 788 aa11.54□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Spag9Q58A65 1321 aaKnown RBP11.53□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Stk26Q99JT2 416 aa11.53□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Map3k1P53349 1493 aa11.53□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Map3k5O35099 1380 aa11.53□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Egfem1Q8C088 590 aa11.52□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Nlrp6Q91WS2 869 aa11.52□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Nup155Q99P88 1391 aaKnown RBP11.52□□□□□ -0.56
Col28a1-201ENSMUST00000115537 Ppm1gQ61074 542 aa11.52□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Psme1P97371 249 aa11.52□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Dnai1Q8C0M8 701 aa11.52□□□□□ -0.57
Col28a1-201ENSMUST00000115537 B4galnt3Q6L8S8 986 aa11.51□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Fam163aQ8CAA5 168 aa11.51□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Dnttip2Q8R2M2 758 aaKnown RBP11.5□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Igf1rQ60751 1373 aa11.5□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Ifit1bl1D3Z6F0 470 aa11.49□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Rad21Q61550 635 aaKnown RBP11.49□□□□□ -0.57
Col28a1-201ENSMUST00000115537 TchhA0A0B4J1F9 1599 aa11.49□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Stag3O70576 1240 aa11.49□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Naip1Q9QWK5 1403 aa11.49□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Exosc9Q9JHI7 438 aaKnown RBP11.48□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Ccdc141E9Q8Q6 1531 aa11.48□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Spryd3E9Q9B3 442 aa11.48□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Sart3Q9JLI8 962 aaKnown RBP11.48□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Afap1Q80YS6 731 aa11.48□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Card11Q8CIS0 1159 aa11.48□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Arap1Q4LDD4 1452 aa11.48□□□□□ -0.57
Col28a1-201ENSMUST00000115537 AqrQ8CFQ3 1481 aaKnown RBP11.48□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Htatsf1Q8BGC0 757 aa11.47□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Pip4k2bQ80XI4 416 aa11.47□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Gtf2a1Q99PM3 378 aa11.47□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Rsph4aQ8BYM7 716 aa11.47□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Dbr1Q923B1 550 aa11.47□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Znf692Q3U381 531 aa11.46□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Samd9lQ69Z37 1561 aa11.46□□□□□ -0.57
Col28a1-201ENSMUST00000115537 Trim30dE9PWL0 497 aa11.46□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Hsp90ab1P11499 724 aaKnown RBP11.46□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Arhgap5P97393 1501 aa11.45□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Cux1P53564 1515 aa11.45□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Slc4a2P13808 1237 aaKnown RBP11.45□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Cnga1P29974 684 aa11.45□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Kcnh8P59111 1102 aa11.45□□□□□ -0.58
Col28a1-201ENSMUST00000115537 PxdnQ3UQ28 1475 aa11.44□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Zfp644E9QA22 1323 aa11.44□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Rrp9Q91WM3 475 aaKnown RBP11.44□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Mre11Q61216 706 aa11.43□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Pla2r1Q62028 1487 aa11.42□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Gapvd1Q6PAR5 1458 aa11.42□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Trim44Q9QXA7 346 aa11.42□□□□□ -0.58
Col28a1-201ENSMUST00000115537 Cyb5rlB1AS42 316 aa11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 86.5 ms