RNA–Protein interactions for RNA: ENSMUST00000087050.6

Col4a4-201, Transcript of Collagen alpha-4(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a4, Length 10,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4-201ENSMUST00000087050 Spryd3E9Q9B3 442 aa12.51□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Ipo8Q7TMY7 1010 aa12.51□□□□□ -0.41
Col4a4-201ENSMUST00000087050 VgfQ0VGU4 617 aa12.5□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Tmf1B9EKI3 1091 aa12.5□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Fyco1Q8VDC1 1437 aa12.5□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Rock2P70336 1388 aa12.5□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Kif15Q6P9L6 1387 aa12.5□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Glipr1l2Q9CQ35 332 aa12.5□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Supt16hQ920B9 1047 aa12.49□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Gm20521D3Z5F7 333 aa12.49□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Sh3bp5Q9Z131 463 aa12.49□□□□□ -0.41
Col4a4-201ENSMUST00000087050 B4galnt3Q6L8S8 986 aa12.49□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Neurod2Q62414 383 aa12.48□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Dnai2A2AC93 623 aa12.48□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Ush1cQ9ES64 910 aa12.48□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Trim30aP15533 496 aa12.47□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Stag3O70576 1240 aa12.46□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Dbr1Q923B1 550 aa12.46□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Kdm2aP59997 1161 aa12.46□□□□□ -0.41
Col4a4-201ENSMUST00000087050 CntlnA2AM05 1397 aa12.46□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Kiaa0754Q69ZZ9 979 aa12.46□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Ylpm1Q9R0I7 1386 aaKnown RBP12.45□□□□□ -0.42
Col4a4-201ENSMUST00000087050 AampJ3QN89 436 aa12.45□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Grwd1Q810D6 446 aaKnown RBP12.44□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Fmn1Q05860 1466 aa12.44□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Pcmtd1P59913 357 aa12.44□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Rsph3aQ3UFY4 516 aa12.44□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Rassf8Q8CJ96 419 aa12.43□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Baz1bQ9Z277 1479 aa12.43□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Anapc15P60007 132 aa12.43□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Dusp9Q7TNL7 452 aa12.42□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Cgnl1Q6AW69 1298 aa12.42□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Armcx1Q9CX83 456 aa12.42□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Mre11Q61216 706 aa12.41□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Zscan21Q07231 555 aa12.41□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Fbxo2Q80UW2 297 aa12.41□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Tpm3P21107 285 aaKnown RBP12.4□□□□□ -0.42
Col4a4-201ENSMUST00000087050 Iffo2Q8R2V2 512 aa12.39□□□□□ -0.43
Col4a4-201ENSMUST00000087050 Zrsr2Q62377 462 aaKnown RBP12.39□□□□□ -0.43
Col4a4-201ENSMUST00000087050 Pdcl3Q8BVF2 240 aa12.37□□□□□ -0.43
Col4a4-201ENSMUST00000087050 Rtf1A2AQ19 715 aaKnown RBP12.37□□□□□ -0.43
Col4a4-201ENSMUST00000087050 Irx6Q9ER75 438 aa12.37□□□□□ -0.43
Col4a4-201ENSMUST00000087050 Ccdc34Q3UI66 367 aa12.36□□□□□ -0.43
Col4a4-201ENSMUST00000087050 Cep162Q6ZQ06 1403 aa12.36□□□□□ -0.43
Col4a4-201ENSMUST00000087050 Spag9Q58A65 1321 aaKnown RBP12.34□□□□□ -0.43
Col4a4-201ENSMUST00000087050 Slc4a3P16283 1227 aa12.34□□□□□ -0.43
Col4a4-201ENSMUST00000087050 Plekhh2Q8C115 1491 aa12.34□□□□□ -0.43
Col4a4-201ENSMUST00000087050 Ccar1Q8CH18 1146 aaKnown RBP12.33□□□□□ -0.43
Col4a4-201ENSMUST00000087050 Ccdc47Q9D024 483 aaKnown RBP12.33□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Ftsj3Q9DBE9 838 aaKnown RBP12.33□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Stard8Q8K031 1019 aa12.33□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Speer4f1Q9D5Q6 258 aa12.33□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Tpm1P58771 284 aa12.33□□□□□ -0.44
Col4a4-201ENSMUST00000087050 St18Q80TY4 1045 aa12.33□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Golga2Q921M4 999 aa12.33□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Mfap1aC0HKD8 439 aaKnown RBP12.33□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Mfap1bC0HKD9 439 aaKnown RBP12.33□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Taf3Q5HZG4 932 aa12.32□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Tpm4Q6IRU2 248 aa12.32□□□□□ -0.44
Col4a4-201ENSMUST00000087050 A0A1L1SQF0 893 aa12.32□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Nol10Q5RJG1 687 aaKnown RBP12.32□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Kdm5dQ62240 1548 aa12.32□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Rrp7aQ9D1C9 280 aaKnown RBP12.32□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Tpd52l1O54818 204 aa12.31□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Dhx57Q6P5D3 1388 aaKnown RBP12.31□□□□□ -0.44
Col4a4-201ENSMUST00000087050 1700019A02RikA0A087WPV9 146 aa12.31□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Rundc1Q0VDN7 615 aa12.31□□□□□ -0.44
Col4a4-201ENSMUST00000087050 CgnP59242 1191 aa12.31□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Cux1P53564 1515 aa12.31□□□□□ -0.44
Col4a4-201ENSMUST00000087050 CalrP14211 416 aaKnown RBP12.3□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Clstn1Q9EPL2 979 aa12.3□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Kif27Q7M6Z4 1394 aa12.3□□□□□ -0.44
Col4a4-201ENSMUST00000087050 MecomP14404 1042 aa12.29□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Exoc6Q8R313 802 aa12.29□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Pkd2O35245 966 aa12.29□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Tpm2P58774 284 aa12.29□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Ccdc173A0JLY1 547 aa12.29□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Smg6P61406 1418 aaKnown RBP12.29□□□□□ -0.44
Col4a4-201ENSMUST00000087050 UacaQ8CGB3 1411 aa12.29□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Hspa5P20029 655 aaKnown RBP12.28□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Rtn4Q99P72 1162 aaKnown RBP12.28□□□□□ -0.44
Col4a4-201ENSMUST00000087050 SlkO54988 1233 aa12.28□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Hmgn5Q9JL35 406 aa12.28□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Srek1Q8BZX4 494 aaKnown RBP12.28□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Sf3a1Q8K4Z5 791 aaKnown RBP12.28□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Gtf2e1Q9D0D5 440 aa12.28□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Ccer1Q9CQL2 403 aa12.28□□□□□ -0.44
Col4a4-201ENSMUST00000087050 Rrp9Q91WM3 475 aaKnown RBP12.27□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Cwc15Q9JHS9 229 aaKnown RBP12.27□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Filip1lQ6P6L0 1131 aa12.26□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Ipo7Q9EPL8 1038 aaKnown RBP12.26□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Polr1aO35134 1717 aaKnown RBP12.26□□□□□ -0.45
Col4a4-201ENSMUST00000087050 PrkcshO08795 521 aa12.26□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Plppr3Q7TPB0 716 aa12.25□□□□□ -0.45
Col4a4-201ENSMUST00000087050 EzrP26040 586 aaKnown RBP12.25□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Arhgap27A2AB59 869 aa12.25□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Kif16bB1AVY7 1312 aa12.25□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Ralbp1Q62172 648 aa12.25□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Stk24Q99KH8 431 aa12.24□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Gprasp1Q5U4C1 1347 aa12.24□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 59.2 ms