RNA–Protein interactions for RNA: ENSMUST00000087050.6

Col4a4-201, Transcript of Collagen alpha-4(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a4, Length 10,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4-201ENSMUST00000087050 Rhox8Q6VSS7 320 aa16.87■□□□□ 0.29
Col4a4-201ENSMUST00000087050 Rpgrip1Q9EPQ2 1331 aa16.69■□□□□ 0.26
Col4a4-201ENSMUST00000087050 Cngb1E1AZ71 1325 aa16.19■□□□□ 0.18
Col4a4-201ENSMUST00000087050 Las1lA2BE28 776 aaKnown RBP16.14■□□□□ 0.17
Col4a4-201ENSMUST00000087050 Pelp1Q9DBD5 1123 aaKnown RBP15.9■□□□□ 0.14
Col4a4-201ENSMUST00000087050 Rtl1Q7M732 1744 aa15.47■□□□□ 0.07
Col4a4-201ENSMUST00000087050 Wdr66E9Q743 1299 aa15.27■□□□□ 0.04
Col4a4-201ENSMUST00000087050 Ehmt2Q9Z148 1263 aaKnown RBP15.19■□□□□ 0.02
Col4a4-201ENSMUST00000087050 Ccdc180J3QNE4 1664 aa15.18■□□□□ 0.02
Col4a4-201ENSMUST00000087050 CenpbP27790 599 aa15.17■□□□□ 0.02
Col4a4-201ENSMUST00000087050 Myt1Q8CFC2 1127 aa15.09■□□□□ 0.01
Col4a4-201ENSMUST00000087050 Amer1Q7TS75 1132 aa15.07■□□□□ 0
Col4a4-201ENSMUST00000087050 Stra8P70278 393 aa15.04■□□□□ -0
Col4a4-201ENSMUST00000087050 Zeb1Q64318 1117 aa15.02□□□□□ -0.01
Col4a4-201ENSMUST00000087050 Acin1Q9JIX8 1338 aaKnown RBP14.93□□□□□ -0.02
Col4a4-201ENSMUST00000087050 Ube2uB1AUC4 352 aa14.91□□□□□ -0.02
Col4a4-201ENSMUST00000087050 NefmP08553 848 aa14.9□□□□□ -0.02
Col4a4-201ENSMUST00000087050 Trim41Q5NCC3 630 aa14.88□□□□□ -0.03
Col4a4-201ENSMUST00000087050 Esf1Q3V1V3 845 aaKnown RBP14.86□□□□□ -0.03
Col4a4-201ENSMUST00000087050 NischQ80TM9 1593 aa14.85□□□□□ -0.03
Col4a4-201ENSMUST00000087050 Ccdc136Q3TVA9 1136 aa14.77□□□□□ -0.04
Col4a4-201ENSMUST00000087050 4930567H17RikQ3V0K5 233 aa14.73□□□□□ -0.05
Col4a4-201ENSMUST00000087050 Npm2Q80W85 207 aa14.7□□□□□ -0.06
Col4a4-201ENSMUST00000087050 Tnnt3Q9QZ47 272 aa14.59□□□□□ -0.07
Col4a4-201ENSMUST00000087050 Gab3Q8BSM5 595 aa14.58□□□□□ -0.07
Col4a4-201ENSMUST00000087050 Rtl5Q5DTT4 599 aa14.49□□□□□ -0.09
Col4a4-201ENSMUST00000087050 Ttbk1Q6PCN3 1308 aa14.48□□□□□ -0.09
Col4a4-201ENSMUST00000087050 Cdk11bP24788 784 aaKnown RBP14.46□□□□□ -0.1
Col4a4-201ENSMUST00000087050 Myt1lP97500 1187 aa14.45□□□□□ -0.1
Col4a4-201ENSMUST00000087050 NeflP08551 543 aa14.36□□□□□ -0.11
Col4a4-201ENSMUST00000087050 4933416C03RikQ3V063 378 aa14.36□□□□□ -0.11
Col4a4-201ENSMUST00000087050 HrcG5E8J6 738 aa14.35□□□□□ -0.11
Col4a4-201ENSMUST00000087050 Pcgf6Q99NA9 353 aa14.35□□□□□ -0.11
Col4a4-201ENSMUST00000087050 Anp32bQ9EST5 272 aaKnown RBP14.35□□□□□ -0.11
Col4a4-201ENSMUST00000087050 DiexfQ8BTT6 772 aaKnown RBP14.34□□□□□ -0.11
Col4a4-201ENSMUST00000087050 UbtfP25976 765 aaKnown RBP14.3□□□□□ -0.12
Col4a4-201ENSMUST00000087050 NrdcQ8BHG1 1161 aa14.28□□□□□ -0.12
Col4a4-201ENSMUST00000087050 Slc24a1Q91WD8 1130 aa14.25□□□□□ -0.13
Col4a4-201ENSMUST00000087050 Nop58Q6DFW4 536 aaKnown RBP14.2□□□□□ -0.14
Col4a4-201ENSMUST00000087050 NclP09405 707 aaKnown RBP14.04□□□□□ -0.16
Col4a4-201ENSMUST00000087050 TonslQ6NZL6 1363 aa14□□□□□ -0.17
Col4a4-201ENSMUST00000087050 Neurod1Q60867 357 aa13.97□□□□□ -0.17
Col4a4-201ENSMUST00000087050 Anp32aO35381 247 aa13.95□□□□□ -0.18
Col4a4-201ENSMUST00000087050 Supt5hO55201 1082 aaKnown RBP13.92□□□□□ -0.18
Col4a4-201ENSMUST00000087050 Eif5bQ05D44 1216 aaKnown RBP13.9□□□□□ -0.18
Col4a4-201ENSMUST00000087050 Fam50aQ9WV03 339 aaKnown RBP13.87□□□□□ -0.19
Col4a4-201ENSMUST00000087050 ClspnQ80YR7 1315 aa13.86□□□□□ -0.19
Col4a4-201ENSMUST00000087050 Zcchc6Q5BLK4 1491 aaKnown RBP13.81□□□□□ -0.2
Col4a4-201ENSMUST00000087050 Os9Q8K2C7 672 aa13.78□□□□□ -0.2
Col4a4-201ENSMUST00000087050 Abcc9P70170 1546 aa13.77□□□□□ -0.2
Col4a4-201ENSMUST00000087050 DaxxO35613 739 aa13.73□□□□□ -0.21
Col4a4-201ENSMUST00000087050 Ccdc9Q8VC31 543 aaKnown RBP13.72□□□□□ -0.21
Col4a4-201ENSMUST00000087050 Ythdc1E9Q5K9 736 aaKnown RBP13.71□□□□□ -0.21
Col4a4-201ENSMUST00000087050 Dcaf1Q80TR8 1506 aa13.68□□□□□ -0.22
Col4a4-201ENSMUST00000087050 Mier1Q5UAK0 511 aa13.66□□□□□ -0.22
Col4a4-201ENSMUST00000087050 Hdac5Q9Z2V6 1113 aa13.65□□□□□ -0.22
Col4a4-201ENSMUST00000087050 Aplp2Q06335 707 aa13.64□□□□□ -0.23
Col4a4-201ENSMUST00000087050 Il27Q8K3I6 234 aa13.64□□□□□ -0.23
Col4a4-201ENSMUST00000087050 Anks4bQ8K3X6 423 aa13.61□□□□□ -0.23
Col4a4-201ENSMUST00000087050 Ap3b1Q9Z1T1 1105 aa13.6□□□□□ -0.23
Col4a4-201ENSMUST00000087050 Upf2A2AT37 1269 aaKnown RBP13.54□□□□□ -0.24
Col4a4-201ENSMUST00000087050 Csrnp3P59055 597 aa13.52□□□□□ -0.25
Col4a4-201ENSMUST00000087050 Nlrp6Q91WS2 869 aa13.5□□□□□ -0.25
Col4a4-201ENSMUST00000087050 Ppargc1bQ8VHJ7 1014 aa13.48□□□□□ -0.25
Col4a4-201ENSMUST00000087050 Ccer2J3QPU5 274 aa13.46□□□□□ -0.26
Col4a4-201ENSMUST00000087050 Cep164Q5DU05 1446 aa13.45□□□□□ -0.26
Col4a4-201ENSMUST00000087050 CatipB9EKE5 520 aa13.43□□□□□ -0.26
Col4a4-201ENSMUST00000087050 Brd4Q9ESU6 1400 aaKnown RBP13.41□□□□□ -0.26
Col4a4-201ENSMUST00000087050 Hsp90aa1P07901 733 aaKnown RBP13.39□□□□□ -0.27
Col4a4-201ENSMUST00000087050 Calr4Q3TQS0 420 aa13.37□□□□□ -0.27
Col4a4-201ENSMUST00000087050 Gm38655A0A286YDK6 273 aa13.29□□□□□ -0.28
Col4a4-201ENSMUST00000087050 Wdr43Q6ZQL4 677 aaKnown RBP13.29□□□□□ -0.28
Col4a4-201ENSMUST00000087050 Abcc8B2RUS7 1588 aa13.27□□□□□ -0.28
Col4a4-201ENSMUST00000087050 Plekhg3Q4VAC9 1341 aa13.27□□□□□ -0.29
Col4a4-201ENSMUST00000087050 Clip1Q922J3 1391 aa13.26□□□□□ -0.29
Col4a4-201ENSMUST00000087050 Rb1cc1Q9ESK9 1588 aa13.26□□□□□ -0.29
Col4a4-201ENSMUST00000087050 Gm35339A0A140LHH9 1649 aa13.26□□□□□ -0.29
Col4a4-201ENSMUST00000087050 Ppp4r2Q0VGB7 417 aa13.24□□□□□ -0.29
Col4a4-201ENSMUST00000087050 Polr3glQ8R0C0 218 aa13.24□□□□□ -0.29
Col4a4-201ENSMUST00000087050 Trim44Q9QXA7 346 aa13.23□□□□□ -0.29
Col4a4-201ENSMUST00000087050 Bcl11aQ9QYE3 773 aa13.22□□□□□ -0.29
Col4a4-201ENSMUST00000087050 Hnrnpul2Q00PI9 745 aaKnown RBP13.22□□□□□ -0.29
Col4a4-201ENSMUST00000087050 Npm1Q61937 292 aaKnown RBP13.21□□□□□ -0.29
Col4a4-201ENSMUST00000087050 Gm13697A2AK42 830 aa13.21□□□□□ -0.3
Col4a4-201ENSMUST00000087050 Sall2Q9QX96 1004 aa13.18□□□□□ -0.3
Col4a4-201ENSMUST00000087050 Lmod2Q3UHZ5 550 aa13.17□□□□□ -0.3
Col4a4-201ENSMUST00000087050 Htatsf1Q8BGC0 757 aa13.17□□□□□ -0.3
Col4a4-201ENSMUST00000087050 DekQ7TNV0 380 aaKnown RBP13.16□□□□□ -0.3
Col4a4-201ENSMUST00000087050 Adam1bQ8R534 806 aa13.16□□□□□ -0.3
Col4a4-201ENSMUST00000087050 Lmod3E9QA62 571 aa13.16□□□□□ -0.3
Col4a4-201ENSMUST00000087050 ArxO35085 564 aa13.15□□□□□ -0.3
Col4a4-201ENSMUST00000087050 Ccdc27Q3V036 639 aa13.14□□□□□ -0.31
Col4a4-201ENSMUST00000087050 Erich6D3Z6S9 713 aa13.13□□□□□ -0.31
Col4a4-201ENSMUST00000087050 1700123L14RikQ3V2K7 440 aa13.12□□□□□ -0.31
Col4a4-201ENSMUST00000087050 Hsp90ab1P11499 724 aaKnown RBP13.09□□□□□ -0.31
Col4a4-201ENSMUST00000087050 Fam71e1A1L3C1 212 aa13.08□□□□□ -0.31
Col4a4-201ENSMUST00000087050 Zbtb7cQ8VCZ7 619 aa13.07□□□□□ -0.32
Col4a4-201ENSMUST00000087050 Atp1b4Q99ME6 356 aa13.07□□□□□ -0.32
Col4a4-201ENSMUST00000087050 Clstn2Q9ER65 966 aa13.07□□□□□ -0.32
Col4a4-201ENSMUST00000087050 CanxP35564 591 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 7.2 ms