RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Map7O88735 730 aa24.19■■□□□ 1.46
Upf1-201ENSMUST00000075666 Mapk8ip3Q9ESN9 1337 aa24.18■■□□□ 1.46
Upf1-201ENSMUST00000075666 Usp47Q8BY87 1376 aa24.17■■□□□ 1.46
Upf1-201ENSMUST00000075666 Map4P27546 1125 aaKnown RBP24.17■■□□□ 1.46
Upf1-201ENSMUST00000075666 Rrp7aQ9D1C9 280 aaKnown RBP24.17■■□□□ 1.46
Upf1-201ENSMUST00000075666 Sart3Q9JLI8 962 aaKnown RBP24.16■■□□□ 1.46
Upf1-201ENSMUST00000075666 Slc4a2P13808 1237 aaKnown RBP24.15■■□□□ 1.46
Upf1-201ENSMUST00000075666 Arhgap27A2AB59 869 aa24.15■■□□□ 1.46
Upf1-201ENSMUST00000075666 Gm20521D3Z5F7 333 aa24.15■■□□□ 1.46
Upf1-201ENSMUST00000075666 Rpap1Q80TE0 1409 aa24.15■■□□□ 1.46
Upf1-201ENSMUST00000075666 Fgd1P52734 960 aa24.12■■□□□ 1.45
Upf1-201ENSMUST00000075666 CrbnQ8C7D2 445 aa24.12■■□□□ 1.45
Upf1-201ENSMUST00000075666 Cttnbp2B9EJA2 1648 aa24.12■■□□□ 1.45
Upf1-201ENSMUST00000075666 Mre11Q61216 706 aa24.12■■□□□ 1.45
Upf1-201ENSMUST00000075666 Pknox2Q8BG99 474 aa24.11■■□□□ 1.45
Upf1-201ENSMUST00000075666 Ccnb3Q810T2 1396 aa24.11■■□□□ 1.45
Upf1-201ENSMUST00000075666 Ercc6F8VPZ5 1481 aa24.11■■□□□ 1.45
Upf1-201ENSMUST00000075666 Carmil1Q6EDY6 1374 aa24.11■■□□□ 1.45
Upf1-201ENSMUST00000075666 UacaQ8CGB3 1411 aa24.09■■□□□ 1.45
Upf1-201ENSMUST00000075666 Srpk2O54781 681 aaKnown RBP24.09■■□□□ 1.45
Upf1-201ENSMUST00000075666 Tmf1B9EKI3 1091 aa24.08■■□□□ 1.45
Upf1-201ENSMUST00000075666 Gm6268A2A3U9 297 aa24.07■■□□□ 1.44
Upf1-201ENSMUST00000075666 Top2aQ01320 1528 aaKnown RBP24.06■■□□□ 1.44
Upf1-201ENSMUST00000075666 NudcO35685 332 aaKnown RBP24.06■■□□□ 1.44
Upf1-201ENSMUST00000075666 Taok2Q6ZQ29 1240 aa24.04■■□□□ 1.44
Upf1-201ENSMUST00000075666 Ifit1bl1D3Z6F0 470 aa24.03■■□□□ 1.44
Upf1-201ENSMUST00000075666 PnisrA2AJT4 805 aaKnown RBP24.02■■□□□ 1.44
Upf1-201ENSMUST00000075666 KnstrnQ9D9Z1 312 aaKnown RBP24.01■■□□□ 1.43
Upf1-201ENSMUST00000075666 Prkrip1Q9CWV6 186 aaKnown RBP24.01■■□□□ 1.43
Upf1-201ENSMUST00000075666 Rock2P70336 1388 aa24.01■■□□□ 1.43
Upf1-201ENSMUST00000075666 Arap1Q4LDD4 1452 aa24■■□□□ 1.43
Upf1-201ENSMUST00000075666 Erich6bQ9D4S6 220 aa23.99■■□□□ 1.43
Upf1-201ENSMUST00000075666 Rrp12Q6P5B0 1295 aaKnown RBP23.98■■□□□ 1.43
Upf1-201ENSMUST00000075666 Naip1Q9QWK5 1403 aa23.98■■□□□ 1.43
Upf1-201ENSMUST00000075666 Cc2d2aQ8CFW7 1633 aa23.98■■□□□ 1.43
Upf1-201ENSMUST00000075666 Golga2Q921M4 999 aa23.97■■□□□ 1.43
Upf1-201ENSMUST00000075666 Vps8Q0P5W1 1427 aa23.97■■□□□ 1.43
Upf1-201ENSMUST00000075666 4933402E13RikQ9D4D2 429 aa23.97■■□□□ 1.43
Upf1-201ENSMUST00000075666 Ttll13A4Q9F6 804 aa23.96■■□□□ 1.43
Upf1-201ENSMUST00000075666 Cluap1Q8R3P7 413 aa23.96■■□□□ 1.43
Upf1-201ENSMUST00000075666 Mfap1aC0HKD8 439 aaKnown RBP23.96■■□□□ 1.43
Upf1-201ENSMUST00000075666 Mfap1bC0HKD9 439 aaKnown RBP23.96■■□□□ 1.43
Upf1-201ENSMUST00000075666 Iqcf3Q9D498 203 aa23.96■■□□□ 1.43
Upf1-201ENSMUST00000075666 CatipB9EKE5 520 aa23.95■■□□□ 1.43
Upf1-201ENSMUST00000075666 Cnga1P29974 684 aa23.95■■□□□ 1.43
Upf1-201ENSMUST00000075666 Eif2s2Q99L45 331 aaKnown RBP23.95■■□□□ 1.42
Upf1-201ENSMUST00000075666 Pds5bQ4VA53 1446 aaKnown RBP23.94■■□□□ 1.42
Upf1-201ENSMUST00000075666 Smarca4Q3TKT4 1613 aaKnown RBP23.94■■□□□ 1.42
Upf1-201ENSMUST00000075666 Dapk1Q80YE7 1442 aa23.93■■□□□ 1.42
Upf1-201ENSMUST00000075666 Plekhh2Q8C115 1491 aa23.93■■□□□ 1.42
Upf1-201ENSMUST00000075666 IqubQ8CDK3 788 aa23.92■■□□□ 1.42
Upf1-201ENSMUST00000075666 Pank3Q8R2W9 370 aa23.91■■□□□ 1.42
Upf1-201ENSMUST00000075666 Chmp4bQ9D8B3 224 aaKnown RBP23.91■■□□□ 1.42
Upf1-201ENSMUST00000075666 Kcnh8P59111 1102 aa23.91■■□□□ 1.42
Upf1-201ENSMUST00000075666 Ak7Q9D2H2 614 aa23.9■■□□□ 1.42
Upf1-201ENSMUST00000075666 Rpgrip1lQ8CG73 1264 aa23.9■■□□□ 1.42
Upf1-201ENSMUST00000075666 Exosc9Q9JHI7 438 aaKnown RBP23.9■■□□□ 1.42
Upf1-201ENSMUST00000075666 Nup155Q99P88 1391 aaKnown RBP23.89■■□□□ 1.41
Upf1-201ENSMUST00000075666 SlkO54988 1233 aa23.88■■□□□ 1.41
Upf1-201ENSMUST00000075666 Esx1O88933 382 aa23.88■■□□□ 1.41
Upf1-201ENSMUST00000075666 Slc4a1apE9PX68 744 aa23.88■■□□□ 1.41
Upf1-201ENSMUST00000075666 Dcaf11Q91VU6 549 aa23.88■■□□□ 1.41
Upf1-201ENSMUST00000075666 Stk24Q99KH8 431 aa23.87■■□□□ 1.41
Upf1-201ENSMUST00000075666 Rock1P70335 1354 aa23.87■■□□□ 1.41
Upf1-201ENSMUST00000075666 Inpp5dQ9ES52 1191 aa23.85■■□□□ 1.41
Upf1-201ENSMUST00000075666 Arhgef5E9Q7D5 1581 aa23.85■■□□□ 1.41
Upf1-201ENSMUST00000075666 Pdcl3Q8BVF2 240 aa23.85■■□□□ 1.41
Upf1-201ENSMUST00000075666 Srcin1Q9QWI6 1250 aa23.84■■□□□ 1.41
Upf1-201ENSMUST00000075666 Tnnt2P50752 301 aa23.84■■□□□ 1.41
Upf1-201ENSMUST00000075666 Ddrgk1Q80WW9 315 aa23.83■■□□□ 1.41
Upf1-201ENSMUST00000075666 Casc1Q6TDU8 730 aa23.83■■□□□ 1.41
Upf1-201ENSMUST00000075666 Ipo4Q8VI75 1082 aa23.82■■□□□ 1.4
Upf1-201ENSMUST00000075666 Gtf2e1Q9D0D5 440 aa23.82■■□□□ 1.4
Upf1-201ENSMUST00000075666 Stag3O70576 1240 aa23.81■■□□□ 1.4
Upf1-201ENSMUST00000075666 Dhx29Q6PGC1 1365 aaKnown RBP23.78■■□□□ 1.4
Upf1-201ENSMUST00000075666 Zfp444Q3TDV8 331 aaKnown RBP23.78■■□□□ 1.4
Upf1-201ENSMUST00000075666 U2af1Q9D883 239 aaKnown RBP23.78■■□□□ 1.4
Upf1-201ENSMUST00000075666 Cux2P70298 1426 aa23.78■■□□□ 1.4
Upf1-201ENSMUST00000075666 Shroom4Q1W617 1475 aa23.77■■□□□ 1.4
Upf1-201ENSMUST00000075666 Ksr2Q3UVC0 959 aa23.77■■□□□ 1.4
Upf1-201ENSMUST00000075666 Rtn4Q99P72 1162 aaKnown RBP23.76■■□□□ 1.39
Upf1-201ENSMUST00000075666 Znf330Q922H9 316 aa23.75■■□□□ 1.39
Upf1-201ENSMUST00000075666 GorabQ8BRM2 368 aa23.74■■□□□ 1.39
Upf1-201ENSMUST00000075666 Ylpm1Q9R0I7 1386 aaKnown RBP23.72■■□□□ 1.39
Upf1-201ENSMUST00000075666 L3mbtl2P59178 703 aa23.72■■□□□ 1.39
Upf1-201ENSMUST00000075666 Tmco5bQ80X59 307 aa23.72■■□□□ 1.39
Upf1-201ENSMUST00000075666 PtmsQ9D0J8 101 aaKnown RBP23.72■■□□□ 1.39
Upf1-201ENSMUST00000075666 Zfp644E9QA22 1323 aa23.72■■□□□ 1.39
Upf1-201ENSMUST00000075666 Zscan10Q3URR7 782 aa23.71■■□□□ 1.39
Upf1-201ENSMUST00000075666 VgfQ0VGU4 617 aa23.71■■□□□ 1.39
Upf1-201ENSMUST00000075666 Atad2bE9Q166 1460 aaKnown RBP23.71■■□□□ 1.39
Upf1-201ENSMUST00000075666 Q7TT23 1179 aa23.71■■□□□ 1.39
Upf1-201ENSMUST00000075666 MsnP26041 577 aaKnown RBP23.7■■□□□ 1.38
Upf1-201ENSMUST00000075666 Liat1Q810M6 228 aa23.7■■□□□ 1.38
Upf1-201ENSMUST00000075666 Tiam1Q60610 1591 aa23.7■■□□□ 1.38
Upf1-201ENSMUST00000075666 Ccdc183A2AJB1 534 aa23.69■■□□□ 1.38
Upf1-201ENSMUST00000075666 HnrnpuQ8VEK3 800 aaKnown RBP23.69■■□□□ 1.38
Upf1-201ENSMUST00000075666 Ccar1Q8CH18 1146 aaKnown RBP23.68■■□□□ 1.38
Upf1-201ENSMUST00000075666 Rsph3aQ3UFY4 516 aa23.68■■□□□ 1.38
Upf1-201ENSMUST00000075666 Adam1bQ8R534 806 aa23.67■■□□□ 1.38
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms