RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Map7O88735 730 aa24.19■■□□□ 1.46
Upf1-201ENSMUST00000075666 Mapk8ip3Q9ESN9 1337 aa24.18■■□□□ 1.46
Upf1-201ENSMUST00000075666 Usp47Q8BY87 1376 aa24.17■■□□□ 1.46
Upf1-201ENSMUST00000075666 Map4P27546 1125 aaKnown RBP24.17■■□□□ 1.46
Upf1-201ENSMUST00000075666 Rrp7aQ9D1C9 280 aaKnown RBP24.17■■□□□ 1.46
Upf1-201ENSMUST00000075666 Sart3Q9JLI8 962 aaKnown RBP24.16■■□□□ 1.46
Upf1-201ENSMUST00000075666 Slc4a2P13808 1237 aaKnown RBP24.15■■□□□ 1.46
Upf1-201ENSMUST00000075666 Arhgap27A2AB59 869 aa24.15■■□□□ 1.46
Upf1-201ENSMUST00000075666 Gm20521D3Z5F7 333 aa24.15■■□□□ 1.46
Upf1-201ENSMUST00000075666 Rpap1Q80TE0 1409 aa24.15■■□□□ 1.46
Upf1-201ENSMUST00000075666 Fgd1P52734 960 aa24.12■■□□□ 1.45
Upf1-201ENSMUST00000075666 CrbnQ8C7D2 445 aa24.12■■□□□ 1.45
Upf1-201ENSMUST00000075666 Cttnbp2B9EJA2 1648 aa24.12■■□□□ 1.45
Upf1-201ENSMUST00000075666 Mre11Q61216 706 aa24.12■■□□□ 1.45
Upf1-201ENSMUST00000075666 Pknox2Q8BG99 474 aa24.11■■□□□ 1.45
Upf1-201ENSMUST00000075666 Ccnb3Q810T2 1396 aa24.11■■□□□ 1.45
Upf1-201ENSMUST00000075666 Ercc6F8VPZ5 1481 aa24.11■■□□□ 1.45
Upf1-201ENSMUST00000075666 Carmil1Q6EDY6 1374 aa24.11■■□□□ 1.45
Upf1-201ENSMUST00000075666 UacaQ8CGB3 1411 aa24.09■■□□□ 1.45
Upf1-201ENSMUST00000075666 Srpk2O54781 681 aaKnown RBP24.09■■□□□ 1.45
Upf1-201ENSMUST00000075666 Tmf1B9EKI3 1091 aa24.08■■□□□ 1.45
Upf1-201ENSMUST00000075666 Gm6268A2A3U9 297 aa24.07■■□□□ 1.44
Upf1-201ENSMUST00000075666 Top2aQ01320 1528 aaKnown RBP24.06■■□□□ 1.44
Upf1-201ENSMUST00000075666 NudcO35685 332 aaKnown RBP24.06■■□□□ 1.44
Upf1-201ENSMUST00000075666 Taok2Q6ZQ29 1240 aa24.04■■□□□ 1.44
Upf1-201ENSMUST00000075666 Ifit1bl1D3Z6F0 470 aa24.03■■□□□ 1.44
Upf1-201ENSMUST00000075666 PnisrA2AJT4 805 aaKnown RBP24.02■■□□□ 1.44
Upf1-201ENSMUST00000075666 KnstrnQ9D9Z1 312 aaKnown RBP24.01■■□□□ 1.43
Upf1-201ENSMUST00000075666 Prkrip1Q9CWV6 186 aaKnown RBP24.01■■□□□ 1.43
Upf1-201ENSMUST00000075666 Rock2P70336 1388 aa24.01■■□□□ 1.43
Upf1-201ENSMUST00000075666 Arap1Q4LDD4 1452 aa24■■□□□ 1.43
Upf1-201ENSMUST00000075666 Erich6bQ9D4S6 220 aa23.99■■□□□ 1.43
Upf1-201ENSMUST00000075666 Rrp12Q6P5B0 1295 aaKnown RBP23.98■■□□□ 1.43
Upf1-201ENSMUST00000075666 Naip1Q9QWK5 1403 aa23.98■■□□□ 1.43
Upf1-201ENSMUST00000075666 Cc2d2aQ8CFW7 1633 aa23.98■■□□□ 1.43
Upf1-201ENSMUST00000075666 Golga2Q921M4 999 aa23.97■■□□□ 1.43
Upf1-201ENSMUST00000075666 Vps8Q0P5W1 1427 aa23.97■■□□□ 1.43
Upf1-201ENSMUST00000075666 4933402E13RikQ9D4D2 429 aa23.97■■□□□ 1.43
Upf1-201ENSMUST00000075666 Ttll13A4Q9F6 804 aa23.96■■□□□ 1.43
Upf1-201ENSMUST00000075666 Cluap1Q8R3P7 413 aa23.96■■□□□ 1.43
Upf1-201ENSMUST00000075666 Mfap1aC0HKD8 439 aaKnown RBP23.96■■□□□ 1.43
Upf1-201ENSMUST00000075666 Mfap1bC0HKD9 439 aaKnown RBP23.96■■□□□ 1.43
Upf1-201ENSMUST00000075666 Iqcf3Q9D498 203 aa23.96■■□□□ 1.43
Upf1-201ENSMUST00000075666 CatipB9EKE5 520 aa23.95■■□□□ 1.43
Upf1-201ENSMUST00000075666 Cnga1P29974 684 aa23.95■■□□□ 1.43
Upf1-201ENSMUST00000075666 Eif2s2Q99L45 331 aaKnown RBP23.95■■□□□ 1.42
Upf1-201ENSMUST00000075666 Pds5bQ4VA53 1446 aaKnown RBP23.94■■□□□ 1.42
Upf1-201ENSMUST00000075666 Smarca4Q3TKT4 1613 aaKnown RBP23.94■■□□□ 1.42
Upf1-201ENSMUST00000075666 Dapk1Q80YE7 1442 aa23.93■■□□□ 1.42
Upf1-201ENSMUST00000075666 Plekhh2Q8C115 1491 aa23.93■■□□□ 1.42
Upf1-201ENSMUST00000075666 IqubQ8CDK3 788 aa23.92■■□□□ 1.42
Upf1-201ENSMUST00000075666 Pank3Q8R2W9 370 aa23.91■■□□□ 1.42
Upf1-201ENSMUST00000075666 Chmp4bQ9D8B3 224 aaKnown RBP23.91■■□□□ 1.42
Upf1-201ENSMUST00000075666 Kcnh8P59111 1102 aa23.91■■□□□ 1.42
Upf1-201ENSMUST00000075666 Ak7Q9D2H2 614 aa23.9■■□□□ 1.42
Upf1-201ENSMUST00000075666 Rpgrip1lQ8CG73 1264 aa23.9■■□□□ 1.42
Upf1-201ENSMUST00000075666 Exosc9Q9JHI7 438 aaKnown RBP23.9■■□□□ 1.42
Upf1-201ENSMUST00000075666 Nup155Q99P88 1391 aaKnown RBP23.89■■□□□ 1.41
Upf1-201ENSMUST00000075666 SlkO54988 1233 aa23.88■■□□□ 1.41
Upf1-201ENSMUST00000075666 Esx1O88933 382 aa23.88■■□□□ 1.41
Upf1-201ENSMUST00000075666 Slc4a1apE9PX68 744 aa23.88■■□□□ 1.41
Upf1-201ENSMUST00000075666 Dcaf11Q91VU6 549 aa23.88■■□□□ 1.41
Upf1-201ENSMUST00000075666 Stk24Q99KH8 431 aa23.87■■□□□ 1.41
Upf1-201ENSMUST00000075666 Rock1P70335 1354 aa23.87■■□□□ 1.41
Upf1-201ENSMUST00000075666 Inpp5dQ9ES52 1191 aa23.85■■□□□ 1.41
Upf1-201ENSMUST00000075666 Arhgef5E9Q7D5 1581 aa23.85■■□□□ 1.41
Upf1-201ENSMUST00000075666 Pdcl3Q8BVF2 240 aa23.85■■□□□ 1.41
Upf1-201ENSMUST00000075666 Srcin1Q9QWI6 1250 aa23.84■■□□□ 1.41
Upf1-201ENSMUST00000075666 Tnnt2P50752 301 aa23.84■■□□□ 1.41
Upf1-201ENSMUST00000075666 Ddrgk1Q80WW9 315 aa23.83■■□□□ 1.41
Upf1-201ENSMUST00000075666 Casc1Q6TDU8 730 aa23.83■■□□□ 1.41
Upf1-201ENSMUST00000075666 Ipo4Q8VI75 1082 aa23.82■■□□□ 1.4
Upf1-201ENSMUST00000075666 Gtf2e1Q9D0D5 440 aa23.82■■□□□ 1.4
Upf1-201ENSMUST00000075666 Stag3O70576 1240 aa23.81■■□□□ 1.4
Upf1-201ENSMUST00000075666 Dhx29Q6PGC1 1365 aaKnown RBP23.78■■□□□ 1.4
Upf1-201ENSMUST00000075666 Zfp444Q3TDV8 331 aaKnown RBP23.78■■□□□ 1.4
Upf1-201ENSMUST00000075666 U2af1Q9D883 239 aaKnown RBP23.78■■□□□ 1.4
Upf1-201ENSMUST00000075666 Cux2P70298 1426 aa23.78■■□□□ 1.4
Upf1-201ENSMUST00000075666 Shroom4Q1W617 1475 aa23.77■■□□□ 1.4
Upf1-201ENSMUST00000075666 Ksr2Q3UVC0 959 aa23.77■■□□□ 1.4
Upf1-201ENSMUST00000075666 Rtn4Q99P72 1162 aaKnown RBP23.76■■□□□ 1.39
Upf1-201ENSMUST00000075666 Znf330Q922H9 316 aa23.75■■□□□ 1.39
Upf1-201ENSMUST00000075666 GorabQ8BRM2 368 aa23.74■■□□□ 1.39
Upf1-201ENSMUST00000075666 Ylpm1Q9R0I7 1386 aaKnown RBP23.72■■□□□ 1.39
Upf1-201ENSMUST00000075666 L3mbtl2P59178 703 aa23.72■■□□□ 1.39
Upf1-201ENSMUST00000075666 Tmco5bQ80X59 307 aa23.72■■□□□ 1.39
Upf1-201ENSMUST00000075666 PtmsQ9D0J8 101 aaKnown RBP23.72■■□□□ 1.39
Upf1-201ENSMUST00000075666 Zfp644E9QA22 1323 aa23.72■■□□□ 1.39
Upf1-201ENSMUST00000075666 Zscan10Q3URR7 782 aa23.71■■□□□ 1.39
Upf1-201ENSMUST00000075666 VgfQ0VGU4 617 aa23.71■■□□□ 1.39
Upf1-201ENSMUST00000075666 Atad2bE9Q166 1460 aaKnown RBP23.71■■□□□ 1.39
Upf1-201ENSMUST00000075666 Q7TT23 1179 aa23.71■■□□□ 1.39
Upf1-201ENSMUST00000075666 MsnP26041 577 aaKnown RBP23.7■■□□□ 1.38
Upf1-201ENSMUST00000075666 Liat1Q810M6 228 aa23.7■■□□□ 1.38
Upf1-201ENSMUST00000075666 Tiam1Q60610 1591 aa23.7■■□□□ 1.38
Upf1-201ENSMUST00000075666 Ccdc183A2AJB1 534 aa23.69■■□□□ 1.38
Upf1-201ENSMUST00000075666 HnrnpuQ8VEK3 800 aaKnown RBP23.69■■□□□ 1.38
Upf1-201ENSMUST00000075666 Ccar1Q8CH18 1146 aaKnown RBP23.68■■□□□ 1.38
Upf1-201ENSMUST00000075666 Rsph3aQ3UFY4 516 aa23.68■■□□□ 1.38
Upf1-201ENSMUST00000075666 Adam1bQ8R534 806 aa23.67■■□□□ 1.38
Retrieved 100 of 22,080 RNA–protein pairs in 70.6 ms