RNA–Protein interactions for RNA: ENSMUST00000063607.11

Knop1-202, Transcript of Lysine-rich nucleolar protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Knop1, Length 4,884 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Knop1-202ENSMUST00000063607 Ofd1Q80Z25 1017 aa14.09□□□□□ -0.15
Knop1-202ENSMUST00000063607 ChgaP26339 463 aaKnown RBP14.09□□□□□ -0.15
Knop1-202ENSMUST00000063607 Fbxo3Q9DC63 480 aa14.08□□□□□ -0.16
Knop1-202ENSMUST00000063607 Gm973E9Q295 1059 aa14.07□□□□□ -0.16
Knop1-202ENSMUST00000063607 Casc1Q6TDU8 730 aa14.06□□□□□ -0.16
Knop1-202ENSMUST00000063607 Trim30aP15533 496 aa14.06□□□□□ -0.16
Knop1-202ENSMUST00000063607 Rgl3Q3UYI5 709 aa14.06□□□□□ -0.16
Knop1-202ENSMUST00000063607 B4galnt3Q6L8S8 986 aa14.04□□□□□ -0.16
Knop1-202ENSMUST00000063607 Ccdc18Q640L5 1455 aa14.03□□□□□ -0.16
Knop1-202ENSMUST00000063607 Pds5bQ4VA53 1446 aaKnown RBP14.03□□□□□ -0.16
Knop1-202ENSMUST00000063607 Dbr1Q923B1 550 aa14.03□□□□□ -0.16
Knop1-202ENSMUST00000063607 Plcd3Q8K2J0 785 aa14.03□□□□□ -0.16
Knop1-202ENSMUST00000063607 Fam13bQ8K2H3 851 aa14.02□□□□□ -0.17
Knop1-202ENSMUST00000063607 Arid3cA6PWV5 409 aa14.01□□□□□ -0.17
Knop1-202ENSMUST00000063607 Dusp27Q148W8 1138 aa13.98□□□□□ -0.17
Knop1-202ENSMUST00000063607 Mre11Q61216 706 aa13.98□□□□□ -0.17
Knop1-202ENSMUST00000063607 Brd2Q7JJ13 798 aaKnown RBP13.98□□□□□ -0.17
Knop1-202ENSMUST00000063607 Eea1Q8BL66 1411 aa13.98□□□□□ -0.17
Knop1-202ENSMUST00000063607 Gpatch11Q3UFS4 262 aa13.97□□□□□ -0.17
Knop1-202ENSMUST00000063607 Kiaa1211Q5PR69 1207 aa13.97□□□□□ -0.17
Knop1-202ENSMUST00000063607 RdxP26043 583 aaKnown RBP13.97□□□□□ -0.17
Knop1-202ENSMUST00000063607 Clstn2Q9ER65 966 aa13.97□□□□□ -0.17
Knop1-202ENSMUST00000063607 Ccdc88bQ4QRL3 1481 aa13.96□□□□□ -0.17
Knop1-202ENSMUST00000063607 Zrsr2Q62377 462 aaKnown RBP13.96□□□□□ -0.17
Knop1-202ENSMUST00000063607 Grwd1Q810D6 446 aaKnown RBP13.96□□□□□ -0.17
Knop1-202ENSMUST00000063607 Phf14Q9D4H9 881 aa13.96□□□□□ -0.17
Knop1-202ENSMUST00000063607 MyclP10166 368 aa13.96□□□□□ -0.18
Knop1-202ENSMUST00000063607 Sycp2Q9CUU3 1500 aa13.94□□□□□ -0.18
Knop1-202ENSMUST00000063607 Ppp1r18Q8BQ30 594 aa13.92□□□□□ -0.18
Knop1-202ENSMUST00000063607 Chmp5Q9D7S9 219 aa13.92□□□□□ -0.18
Knop1-202ENSMUST00000063607 Paf1Q8K2T8 535 aa13.91□□□□□ -0.18
Knop1-202ENSMUST00000063607 Tmem132aQ922P8 1018 aa13.91□□□□□ -0.18
Knop1-202ENSMUST00000063607 Scaf1Q5U4C3 1256 aaKnown RBP13.91□□□□□ -0.18
Knop1-202ENSMUST00000063607 Taf3Q5HZG4 932 aa13.9□□□□□ -0.18
Knop1-202ENSMUST00000063607 Dusp9Q7TNL7 452 aa13.89□□□□□ -0.19
Knop1-202ENSMUST00000063607 Cecr2E9Q2Z1 1453 aa13.89□□□□□ -0.19
Knop1-202ENSMUST00000063607 EspnQ9ET47 871 aa13.89□□□□□ -0.19
Knop1-202ENSMUST00000063607 Kdm2aP59997 1161 aa13.89□□□□□ -0.19
Knop1-202ENSMUST00000063607 Rrp7aQ9D1C9 280 aaKnown RBP13.89□□□□□ -0.19
Knop1-202ENSMUST00000063607 Sart3Q9JLI8 962 aaKnown RBP13.89□□□□□ -0.19
Knop1-202ENSMUST00000063607 AknaQ80VW7 1404 aa13.88□□□□□ -0.19
Knop1-202ENSMUST00000063607 Ipo8Q7TMY7 1010 aa13.86□□□□□ -0.19
Knop1-202ENSMUST00000063607 Hspa5P20029 655 aaKnown RBP13.86□□□□□ -0.19
Knop1-202ENSMUST00000063607 Mbd3Q9Z2D8 285 aaKnown RBP13.86□□□□□ -0.19
Knop1-202ENSMUST00000063607 Cux2P70298 1426 aa13.85□□□□□ -0.19
Knop1-202ENSMUST00000063607 Cwc15Q9JHS9 229 aaKnown RBP13.84□□□□□ -0.19
Knop1-202ENSMUST00000063607 Map7O88735 730 aa13.84□□□□□ -0.19
Knop1-202ENSMUST00000063607 Kif3aP28741 701 aa13.84□□□□□ -0.19
Knop1-202ENSMUST00000063607 Anp32eP97822 260 aaKnown RBP13.83□□□□□ -0.2
Knop1-202ENSMUST00000063607 Mex3cQ05A36 652 aaKnown RBP13.82□□□□□ -0.2
Knop1-202ENSMUST00000063607 Paxip1Q6NZQ4 1056 aa13.82□□□□□ -0.2
Knop1-202ENSMUST00000063607 ScribQ80U72 1612 aa13.82□□□□□ -0.2
Knop1-202ENSMUST00000063607 Trim55G3X8Y1 545 aa13.82□□□□□ -0.2
Knop1-202ENSMUST00000063607 Pnmal2G3X9N3 661 aa13.82□□□□□ -0.2
Knop1-202ENSMUST00000063607 Card11Q8CIS0 1159 aa13.82□□□□□ -0.2
Knop1-202ENSMUST00000063607 Kif20aP97329 887 aa13.81□□□□□ -0.2
Knop1-202ENSMUST00000063607 Pes1Q9EQ61 584 aaKnown RBP13.81□□□□□ -0.2
Knop1-202ENSMUST00000063607 Gm6268A2A3U9 297 aa13.81□□□□□ -0.2
Knop1-202ENSMUST00000063607 Pdia4P08003 638 aaKnown RBP13.8□□□□□ -0.2
Knop1-202ENSMUST00000063607 Iqcf3Q9D498 203 aa13.8□□□□□ -0.2
Knop1-202ENSMUST00000063607 Erich4Q3UNU4 136 aa13.8□□□□□ -0.2
Knop1-202ENSMUST00000063607 Chmp4bQ9D8B3 224 aaKnown RBP13.8□□□□□ -0.2
Knop1-202ENSMUST00000063607 Mroh3A0A1D5RM54 893 aa13.79□□□□□ -0.2
Knop1-202ENSMUST00000063607 Apbb1Q9QXJ1 710 aa13.79□□□□□ -0.2
Knop1-202ENSMUST00000063607 Pak3Q61036 559 aa13.78□□□□□ -0.2
Knop1-202ENSMUST00000063607 Ralbp1Q62172 648 aa13.77□□□□□ -0.2
Knop1-202ENSMUST00000063607 Wwc2Q6NXJ0 1187 aa13.77□□□□□ -0.2
Knop1-202ENSMUST00000063607 Stk24Q99KH8 431 aa13.77□□□□□ -0.21
Knop1-202ENSMUST00000063607 Cep162Q6ZQ06 1403 aa13.77□□□□□ -0.21
Knop1-202ENSMUST00000063607 Cspp1B2RX88 1205 aa13.76□□□□□ -0.21
Knop1-202ENSMUST00000063607 Zhx1P70121 873 aa13.76□□□□□ -0.21
Knop1-202ENSMUST00000063607 Phldb1Q6PDH0 1371 aaKnown RBP13.76□□□□□ -0.21
Knop1-202ENSMUST00000063607 Tshz2Q68FE9 1030 aa13.75□□□□□ -0.21
Knop1-202ENSMUST00000063607 Tomm22Q9CPQ3 142 aa13.75□□□□□ -0.21
Knop1-202ENSMUST00000063607 Pcmtd1P59913 357 aa13.75□□□□□ -0.21
Knop1-202ENSMUST00000063607 Cald1E9QA15 768 aaKnown RBP13.73□□□□□ -0.21
Knop1-202ENSMUST00000063607 Sin3aQ60520 1274 aaKnown RBP13.73□□□□□ -0.21
Knop1-202ENSMUST00000063607 Neurod2Q62414 383 aa13.73□□□□□ -0.21
Knop1-202ENSMUST00000063607 Mtus2Q3UHD3 1353 aa13.73□□□□□ -0.21
Knop1-202ENSMUST00000063607 Tnnt1O88346 262 aa13.73□□□□□ -0.21
Knop1-202ENSMUST00000063607 NgefQ8CHT1 710 aa13.72□□□□□ -0.21
Knop1-202ENSMUST00000063607 CftrP26361 1476 aa13.72□□□□□ -0.21
Knop1-202ENSMUST00000063607 Dydc1Q9D9T0 175 aa13.72□□□□□ -0.21
Knop1-202ENSMUST00000063607 Def6Q8C2K1 630 aa13.71□□□□□ -0.21
Knop1-202ENSMUST00000063607 Rpap1Q80TE0 1409 aa13.71□□□□□ -0.21
Knop1-202ENSMUST00000063607 Gm20521D3Z5F7 333 aa13.71□□□□□ -0.21
Knop1-202ENSMUST00000063607 MlecQ6ZQI3 291 aaKnown RBP13.71□□□□□ -0.21
Knop1-202ENSMUST00000063607 Cwc22Q8C5N3 908 aaKnown RBP13.71□□□□□ -0.21
Knop1-202ENSMUST00000063607 Samd1D3YXK1 519 aa13.71□□□□□ -0.22
Knop1-202ENSMUST00000063607 Srpk2O54781 681 aaKnown RBP13.7□□□□□ -0.22
Knop1-202ENSMUST00000063607 Atad2bE9Q166 1460 aaKnown RBP13.69□□□□□ -0.22
Knop1-202ENSMUST00000063607 Chaf1aQ9QWF0 911 aa13.69□□□□□ -0.22
Knop1-202ENSMUST00000063607 Kif27Q7M6Z4 1394 aa13.69□□□□□ -0.22
Knop1-202ENSMUST00000063607 Mia2Q91ZV0 1396 aa13.69□□□□□ -0.22
Knop1-202ENSMUST00000063607 Cbx1P83917 185 aaKnown RBP13.68□□□□□ -0.22
Knop1-202ENSMUST00000063607 Zfp91Q62511 572 aa13.68□□□□□ -0.22
Knop1-202ENSMUST00000063607 Irx6Q9ER75 438 aa13.68□□□□□ -0.22
Knop1-202ENSMUST00000063607 Ccdc34Q3UI66 367 aa13.67□□□□□ -0.22
Knop1-202ENSMUST00000063607 Pkd2O35245 966 aa13.67□□□□□ -0.22
Knop1-202ENSMUST00000063607 Gps2Q921N8 327 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms