RNA–Protein interactions for RNA: ENSMUST00000063607.11

Knop1-202, Transcript of Lysine-rich nucleolar protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Knop1, Length 4,884 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Knop1-202ENSMUST00000063607 Rhox8Q6VSS7 320 aa18.77■□□□□ 0.6
Knop1-202ENSMUST00000063607 Rpgrip1Q9EPQ2 1331 aa18.77■□□□□ 0.6
Knop1-202ENSMUST00000063607 Las1lA2BE28 776 aaKnown RBP18.6■□□□□ 0.57
Knop1-202ENSMUST00000063607 Cngb1E1AZ71 1325 aa18.23■□□□□ 0.51
Knop1-202ENSMUST00000063607 Amer1Q7TS75 1132 aa18.03■□□□□ 0.48
Knop1-202ENSMUST00000063607 Myt1Q8CFC2 1127 aa17.88■□□□□ 0.45
Knop1-202ENSMUST00000063607 CenpbP27790 599 aa17.71■□□□□ 0.43
Knop1-202ENSMUST00000063607 Pelp1Q9DBD5 1123 aaKnown RBP17.71■□□□□ 0.43
Knop1-202ENSMUST00000063607 DiexfQ8BTT6 772 aaKnown RBP17.64■□□□□ 0.41
Knop1-202ENSMUST00000063607 Ehmt2Q9Z148 1263 aaKnown RBP17.21■□□□□ 0.35
Knop1-202ENSMUST00000063607 Pcgf6Q99NA9 353 aa16.94■□□□□ 0.3
Knop1-202ENSMUST00000063607 Wdr66E9Q743 1299 aa16.92■□□□□ 0.3
Knop1-202ENSMUST00000063607 Acin1Q9JIX8 1338 aaKnown RBP16.91■□□□□ 0.3
Knop1-202ENSMUST00000063607 Zeb1Q64318 1117 aa16.9■□□□□ 0.3
Knop1-202ENSMUST00000063607 Ccdc136Q3TVA9 1136 aa16.85■□□□□ 0.29
Knop1-202ENSMUST00000063607 Ttbk1Q6PCN3 1308 aa16.8■□□□□ 0.28
Knop1-202ENSMUST00000063607 4930567H17RikQ3V0K5 233 aa16.78■□□□□ 0.28
Knop1-202ENSMUST00000063607 NischQ80TM9 1593 aa16.7■□□□□ 0.26
Knop1-202ENSMUST00000063607 Esf1Q3V1V3 845 aaKnown RBP16.62■□□□□ 0.25
Knop1-202ENSMUST00000063607 4933416C03RikQ3V063 378 aa16.49■□□□□ 0.23
Knop1-202ENSMUST00000063607 Rtl5Q5DTT4 599 aa16.48■□□□□ 0.23
Knop1-202ENSMUST00000063607 Cdk11bP24788 784 aaKnown RBP16.42■□□□□ 0.22
Knop1-202ENSMUST00000063607 Gab3Q8BSM5 595 aa16.4■□□□□ 0.22
Knop1-202ENSMUST00000063607 Bcl11aQ9QYE3 773 aa16.31■□□□□ 0.2
Knop1-202ENSMUST00000063607 Trim41Q5NCC3 630 aa16.27■□□□□ 0.2
Knop1-202ENSMUST00000063607 Supt5hO55201 1082 aaKnown RBP16.25■□□□□ 0.19
Knop1-202ENSMUST00000063607 NefmP08553 848 aa16.22■□□□□ 0.19
Knop1-202ENSMUST00000063607 Tnnt3Q9QZ47 272 aa16.21■□□□□ 0.19
Knop1-202ENSMUST00000063607 Neurod1Q60867 357 aa16.2■□□□□ 0.18
Knop1-202ENSMUST00000063607 Stra8P70278 393 aa16.19■□□□□ 0.18
Knop1-202ENSMUST00000063607 Abcc9P70170 1546 aa16.17■□□□□ 0.18
Knop1-202ENSMUST00000063607 Nop58Q6DFW4 536 aaKnown RBP16.14■□□□□ 0.18
Knop1-202ENSMUST00000063607 Ythdc1E9Q5K9 736 aaKnown RBP16.12■□□□□ 0.17
Knop1-202ENSMUST00000063607 Aplp2Q06335 707 aa16.08■□□□□ 0.16
Knop1-202ENSMUST00000063607 Myt1lP97500 1187 aa16.05■□□□□ 0.16
Knop1-202ENSMUST00000063607 Npm2Q80W85 207 aa16.04■□□□□ 0.16
Knop1-202ENSMUST00000063607 Ube2uB1AUC4 352 aa16.01■□□□□ 0.15
Knop1-202ENSMUST00000063607 Csrnp3P59055 597 aa16.01■□□□□ 0.15
Knop1-202ENSMUST00000063607 Gm35339A0A140LHH9 1649 aa15.98■□□□□ 0.15
Knop1-202ENSMUST00000063607 Anks4bQ8K3X6 423 aa15.93■□□□□ 0.14
Knop1-202ENSMUST00000063607 Anp32aO35381 247 aa15.91■□□□□ 0.14
Knop1-202ENSMUST00000063607 1700123L14RikQ3V2K7 440 aa15.91■□□□□ 0.14
Knop1-202ENSMUST00000063607 HrcG5E8J6 738 aa15.89■□□□□ 0.13
Knop1-202ENSMUST00000063607 Il27Q8K3I6 234 aa15.89■□□□□ 0.13
Knop1-202ENSMUST00000063607 Gm38655A0A286YDK6 273 aa15.83■□□□□ 0.12
Knop1-202ENSMUST00000063607 DaxxO35613 739 aa15.83■□□□□ 0.12
Knop1-202ENSMUST00000063607 Ccdc9Q8VC31 543 aaKnown RBP15.79■□□□□ 0.12
Knop1-202ENSMUST00000063607 UbtfP25976 765 aaKnown RBP15.77■□□□□ 0.11
Knop1-202ENSMUST00000063607 Slc24a1Q91WD8 1130 aa15.76■□□□□ 0.11
Knop1-202ENSMUST00000063607 Zcchc6Q5BLK4 1491 aaKnown RBP15.63■□□□□ 0.09
Knop1-202ENSMUST00000063607 Ccdc180J3QNE4 1664 aa15.59■□□□□ 0.09
Knop1-202ENSMUST00000063607 Pknox2Q8BG99 474 aa15.57■□□□□ 0.08
Knop1-202ENSMUST00000063607 Anp32bQ9EST5 272 aaKnown RBP15.54■□□□□ 0.08
Knop1-202ENSMUST00000063607 PrkcshO08795 521 aa15.53■□□□□ 0.08
Knop1-202ENSMUST00000063607 Fam71e1A1L3C1 212 aa15.52■□□□□ 0.08
Knop1-202ENSMUST00000063607 Ppargc1bQ8VHJ7 1014 aa15.51■□□□□ 0.07
Knop1-202ENSMUST00000063607 Hsp90aa1P07901 733 aaKnown RBP15.47■□□□□ 0.07
Knop1-202ENSMUST00000063607 Eif5bQ05D44 1216 aaKnown RBP15.45■□□□□ 0.06
Knop1-202ENSMUST00000063607 Irx3P81067 507 aa15.43■□□□□ 0.06
Knop1-202ENSMUST00000063607 NeflP08551 543 aa15.42■□□□□ 0.06
Knop1-202ENSMUST00000063607 Rtl1Q7M732 1744 aa15.35■□□□□ 0.05
Knop1-202ENSMUST00000063607 Sall2Q9QX96 1004 aa15.33■□□□□ 0.05
Knop1-202ENSMUST00000063607 Ap3b1Q9Z1T1 1105 aa15.33■□□□□ 0.05
Knop1-202ENSMUST00000063607 Abcc8B2RUS7 1588 aa15.33■□□□□ 0.05
Knop1-202ENSMUST00000063607 Mapk8ip2Q9ERE9 830 aa15.32■□□□□ 0.04
Knop1-202ENSMUST00000063607 ClspnQ80YR7 1315 aa15.32■□□□□ 0.04
Knop1-202ENSMUST00000063607 NrdcQ8BHG1 1161 aa15.32■□□□□ 0.04
Knop1-202ENSMUST00000063607 Lmod3E9QA62 571 aa15.26■□□□□ 0.03
Knop1-202ENSMUST00000063607 Ccdc27Q3V036 639 aa15.26■□□□□ 0.03
Knop1-202ENSMUST00000063607 Fam50aQ9WV03 339 aaKnown RBP15.23■□□□□ 0.03
Knop1-202ENSMUST00000063607 BccipQ9CWI3 316 aa15.18■□□□□ 0.02
Knop1-202ENSMUST00000063607 Znf326O88291 580 aa15.17■□□□□ 0.02
Knop1-202ENSMUST00000063607 Taok2Q6ZQ29 1240 aa15.17■□□□□ 0.02
Knop1-202ENSMUST00000063607 Npm1Q61937 292 aaKnown RBP15.15■□□□□ 0.02
Knop1-202ENSMUST00000063607 CatipB9EKE5 520 aa15.15■□□□□ 0.02
Knop1-202ENSMUST00000063607 Ppp4r2Q0VGB7 417 aa15.14■□□□□ 0.01
Knop1-202ENSMUST00000063607 Gtf3c3Q3TMP1 882 aa15.12■□□□□ 0.01
Knop1-202ENSMUST00000063607 Calr4Q3TQS0 420 aa15.12■□□□□ 0.01
Knop1-202ENSMUST00000063607 Tnnt2P50752 301 aa15.12■□□□□ 0.01
Knop1-202ENSMUST00000063607 TonslQ6NZL6 1363 aa15.12■□□□□ 0.01
Knop1-202ENSMUST00000063607 Hdac5Q9Z2V6 1113 aa15.11■□□□□ 0.01
Knop1-202ENSMUST00000063607 Ifnlr1Q8CGK5 535 aa15.1■□□□□ 0.01
Knop1-202ENSMUST00000063607 NclP09405 707 aaKnown RBP15.09■□□□□ 0.01
Knop1-202ENSMUST00000063607 Znf316Q6PGE4 1016 aa15.09■□□□□ 0.01
Knop1-202ENSMUST00000063607 Mier1Q5UAK0 511 aa15.07■□□□□ 0
Knop1-202ENSMUST00000063607 Wdr43Q6ZQL4 677 aaKnown RBP15.05■□□□□ -0
Knop1-202ENSMUST00000063607 Upf2A2AT37 1269 aaKnown RBP15.02■□□□□ -0
Knop1-202ENSMUST00000063607 Podxl2Q8CAE9 603 aa15.02□□□□□ -0.01
Knop1-202ENSMUST00000063607 AU015836B2RUM3 263 aa15.01□□□□□ -0.01
Knop1-202ENSMUST00000063607 Q8BT18 775 aa15□□□□□ -0.01
Knop1-202ENSMUST00000063607 Trim44Q9QXA7 346 aa14.98□□□□□ -0.01
Knop1-202ENSMUST00000063607 Gtf3c5Q8R2T8 520 aa14.97□□□□□ -0.01
Knop1-202ENSMUST00000063607 Zbtb7cQ8VCZ7 619 aa14.97□□□□□ -0.01
Knop1-202ENSMUST00000063607 Lmod2Q3UHZ5 550 aa14.95□□□□□ -0.02
Knop1-202ENSMUST00000063607 Plekhg3Q4VAC9 1341 aa14.94□□□□□ -0.02
Knop1-202ENSMUST00000063607 Ubl4bQ9CQ84 188 aa14.91□□□□□ -0.02
Knop1-202ENSMUST00000063607 Fkbp15Q6P9Q6 1216 aaKnown RBP14.9□□□□□ -0.02
Knop1-202ENSMUST00000063607 Rtn4Q99P72 1162 aaKnown RBP14.87□□□□□ -0.03
Knop1-202ENSMUST00000063607 Plppr3Q7TPB0 716 aa14.86□□□□□ -0.03
Knop1-202ENSMUST00000063607 4933402E13RikQ9D4D2 429 aa14.83□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms